Strain Fitness in Serratia liquefaciens MT49 around IAI46_00475

Experiment: Nickel (II) chloride 80 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 80 uM, anaerobic
105,341	+		IAI46_00470	0.79	+0.6
105,341	+		IAI46_00470	0.79	+2.4
105,341	+		IAI46_00470	0.79	-2.3
105,341	+		IAI46_00470	0.79	-0.9
105,342	-		IAI46_00470	0.79	-0.2
105,342	-		IAI46_00470	0.79	+0.3
105,342	-		IAI46_00470	0.79	+0.3
105,342	-		IAI46_00470	0.79	+0.2
105,421	+		IAI46_00470	0.83	+0.3
105,422	-		IAI46_00470	0.83	-0.1
105,446	+		IAI46_00470	0.85	+0.3
105,469	+		IAI46_00470	0.86	+0.7
105,488	+		IAI46_00470	0.87	+0.3
105,488	+		IAI46_00470	0.87	+0.4
105,489	-		IAI46_00470	0.87	-0.4
105,489	-		IAI46_00470	0.87	+1.0
105,489	-		IAI46_00470	0.87	-0.2
105,494	+		IAI46_00470	0.88	-0.4
105,494	+		IAI46_00470	0.88	+0.5
105,494	+		IAI46_00470	0.88	-0.1
105,495	-		IAI46_00470	0.88	+0.2
105,495	-		IAI46_00470	0.88	-0.1
105,503	-		IAI46_00470	0.88	-1.3
105,518	+		IAI46_00470	0.89	+0.5
105,518	+		IAI46_00470	0.89	+0.5
105,518	+		IAI46_00470	0.89	-0.0
105,519	-		IAI46_00470	0.89	-0.1
105,519	-		IAI46_00470	0.89	+0.1
105,519	-		IAI46_00470	0.89	+0.3
105,590	+				-0.9
105,590	+				-0.1
105,591	-				+0.7
105,591	-				-1.1
105,591	-				+0.6
105,591	-				+0.1
105,602	-				-0.8
105,662	-				-0.8
105,662	-				+0.0
105,694	+				-0.9
105,694	+				+0.3
105,712	+				+0.2
105,713	-				+0.7
105,713	-				-0.6
105,713	-				+0.2
105,713	-				+0.8
105,715	+				+1.4
105,715	+				+0.2
105,731	-				-0.3
105,731	-				-0.0
105,779	+				+0.7
105,856	+				-0.1
105,856	+				-0.6
105,857	-				+0.7
105,879	-				+0.1
105,890	+				-0.3
105,891	-				-0.6
105,934	+				+0.8
105,944	+				-0.2
105,986	+				-0.1
105,986	+				+0.2
105,986	+				-0.5
105,986	+				+0.6
105,986	+				-0.2
105,987	-				+0.3
106,013	+				+0.1
106,061	+				+1.1
106,061	+				+0.1
106,062	-				-0.6
106,076	+				-1.1
106,076	+				+0.0
106,076	+				+0.5
106,077	-				+0.8
106,077	-				-0.7
106,077	-				-0.7
106,078	+				-0.7
106,078	+				-0.7
106,078	+				+0.0
106,078	+				+0.7
106,079	-				-1.2
106,079	-				-0.3
106,112	-				-1.6
106,124	-				+0.2
106,205	+				+0.1
106,205	+				-0.7
106,206	-				-1.9
106,206	-				+0.3
106,253	+				-0.1
106,289	+				-0.7
106,289	+				+0.0
106,289	+				+0.1
106,289	+				+0.1
106,289	+				-0.1
106,290	-				-0.3
106,290	-				+0.2
106,300	+				+1.0
106,300	+				+0.7
106,346	+				+2.0
106,401	+				-0.0
106,445	+				-0.0
106,446	-				-0.6
106,461	+				-0.3
106,461	+				+0.5
106,461	+				-0.2
106,461	+				-1.6
106,462	-				-1.2
106,462	-				+0.1
106,462	-				+0.9
106,462	-				+0.7
106,485	+		IAI46_00475	0.11	+0.3
106,575	+		IAI46_00475	0.17	-0.5
106,575	+		IAI46_00475	0.17	-0.5
106,576	-		IAI46_00475	0.17	+0.6
106,576	-		IAI46_00475	0.17	+0.2
106,576	-		IAI46_00475	0.17	+0.2
106,592	+		IAI46_00475	0.18	+0.6
106,593	-		IAI46_00475	0.18	+0.7
106,692	-		IAI46_00475	0.24	-0.2
106,692	-		IAI46_00475	0.24	+0.5
106,698	+		IAI46_00475	0.24	+0.1
106,722	+		IAI46_00475	0.26	+0.5
106,722	+		IAI46_00475	0.26	+0.7
106,722	+		IAI46_00475	0.26	-0.3
106,722	+		IAI46_00475	0.26	-0.8
106,723	-		IAI46_00475	0.26	+0.2
106,723	-		IAI46_00475	0.26	+0.8
106,723	-		IAI46_00475	0.26	+0.8
106,723	-		IAI46_00475	0.26	+0.7
106,723	-		IAI46_00475	0.26	-0.3
106,723	-		IAI46_00475	0.26	+0.2
106,723	-		IAI46_00475	0.26	-0.2
106,728	+		IAI46_00475	0.26	-0.1
106,728	+		IAI46_00475	0.26	+0.1
106,956	+		IAI46_00475	0.40	+0.5
106,956	+		IAI46_00475	0.40	+0.2
106,982	+		IAI46_00475	0.42	+0.5
106,982	+		IAI46_00475	0.42	-0.6
106,983	-		IAI46_00475	0.42	+0.2
107,030	-		IAI46_00475	0.45	+0.7
107,040	-		IAI46_00475	0.46	-0.6
107,185	-		IAI46_00475	0.55	-1.7
107,185	-		IAI46_00475	0.55	-0.1
107,283	+		IAI46_00475	0.61	-0.5
107,283	+		IAI46_00475	0.61	+0.1
107,338	-		IAI46_00475	0.64	+0.2
107,338	-		IAI46_00475	0.64	-0.8
107,339	+		IAI46_00475	0.64	-0.8
107,340	-		IAI46_00475	0.64	-0.5
107,364	+		IAI46_00475	0.66	-0.1
107,364	+		IAI46_00475	0.66	-0.2
107,364	+		IAI46_00475	0.66	+0.0
107,364	+		IAI46_00475	0.66	-0.4
107,365	-		IAI46_00475	0.66	+0.2
107,365	-		IAI46_00475	0.66	+0.6
107,365	-		IAI46_00475	0.66	+0.4
107,365	-		IAI46_00475	0.66	+0.0
107,438	+		IAI46_00475	0.70	-1.1
107,438	+		IAI46_00475	0.70	+1.4
107,447	-		IAI46_00475	0.71	-0.4
107,457	+		IAI46_00475	0.72	+0.1
107,457	+		IAI46_00475	0.72	-0.7
107,458	-		IAI46_00475	0.72	+1.3
107,458	-		IAI46_00475	0.72	-0.1
107,458	-		IAI46_00475	0.72	-0.5
107,458	-		IAI46_00475	0.72	+0.5
107,458	-		IAI46_00475	0.72	+0.5
107,538	+		IAI46_00475	0.77	+0.4
107,538	+		IAI46_00475	0.77	-0.7
107,538	+		IAI46_00475	0.77	-0.7
107,538	+		IAI46_00475	0.77	+0.1
107,539	-		IAI46_00475	0.77	+0.4
107,539	-		IAI46_00475	0.77	-0.1
107,539	-		IAI46_00475	0.77	-1.7
107,539	-		IAI46_00475	0.77	+0.0
107,553	+		IAI46_00475	0.78	+0.2
107,553	+		IAI46_00475	0.78	+0.4
107,553	+		IAI46_00475	0.78	+0.4
107,649	-		IAI46_00475	0.84	+0.0
107,679	+		IAI46_00475	0.85	+0.4
107,679	+		IAI46_00475	0.85	-0.3
107,679	+		IAI46_00475	0.85	-0.2
107,680	-		IAI46_00475	0.86	-0.7
107,680	-		IAI46_00475	0.86	+0.9
107,680	-		IAI46_00475	0.86	-3.3
107,694	+		IAI46_00475	0.86	-1.0
107,695	-		IAI46_00475	0.86	+0.4
107,695	-		IAI46_00475	0.86	-0.2
107,763	+				+0.1
107,764	-				-0.0
107,780	-				-0.2
107,859	+				-0.0
107,859	+				-0.9
107,859	+				+0.2
107,859	+				-0.6
107,859	+				-0.3
107,860	-				+0.2
107,860	-				+0.1
107,860	-				-0.6
107,860	-				+0.6
107,879	+				+0.3
107,879	+				-1.2
107,880	-				-0.2
107,880	-				+0.3
107,906	-				+0.4
107,911	-				+0.2
108,029	-				-0.3
108,029	-				+0.5
108,029	-				+0.0
108,029	-				+0.3
108,031	+				+0.8
108,032	-				+0.2
108,032	-				-0.3
108,032	-				-0.4
108,032	-				+0.3
108,064	+				-0.1
108,066	+				-0.2
108,082	+				+0.5
108,115	-				+0.7
108,115	-				-0.2
108,118	+				-1.7
108,131	-				+0.1
108,139	-				+1.1
108,166	+				-2.0
108,166	+				-0.2
108,269	+		IAI46_00480	0.18	-1.3
108,269	+		IAI46_00480	0.18	-1.3
108,270	-		IAI46_00480	0.18	+0.2
108,270	-		IAI46_00480	0.18	+0.8
108,279	-		IAI46_00480	0.19	-1.0
108,279	-		IAI46_00480	0.19	-0.9
108,287	+		IAI46_00480	0.20	-0.9
108,288	-		IAI46_00480	0.20	+0.9
108,288	-		IAI46_00480	0.20	-0.3
108,288	-		IAI46_00480	0.20	-0.3
108,291	+		IAI46_00480	0.20	-0.4
108,291	+		IAI46_00480	0.20	-0.3
108,291	+		IAI46_00480	0.20	+0.6
108,292	-		IAI46_00480	0.20	+0.4
108,292	-		IAI46_00480	0.20	+0.3
108,387	+		IAI46_00480	0.30	+0.4
108,388	-		IAI46_00480	0.30	-0.2
108,388	-		IAI46_00480	0.30	+0.5
108,466	-		IAI46_00480	0.38	+0.2
108,613	+		IAI46_00480	0.52	+0.6
108,613	+		IAI46_00480	0.52	-0.4
108,634	+		IAI46_00480	0.54	-0.2
108,635	-		IAI46_00480	0.54	-0.4
108,694	+		IAI46_00480	0.60	+0.8
108,694	+		IAI46_00480	0.60	+0.7
108,694	+		IAI46_00480	0.60	+1.4
108,694	+		IAI46_00480	0.60	-0.2
108,694	+		IAI46_00480	0.60	+0.4
108,694	+		IAI46_00480	0.60	-0.1
108,694	+		IAI46_00480	0.60	+0.7
108,694	+		IAI46_00480	0.60	-0.5
108,694	+		IAI46_00480	0.60	+0.5
108,694	+		IAI46_00480	0.60	+0.3
108,695	-		IAI46_00480	0.60	-0.3
108,695	-		IAI46_00480	0.60	-0.1
108,695	-		IAI46_00480	0.60	-0.4
108,695	-		IAI46_00480	0.60	+0.1
108,695	-		IAI46_00480	0.60	-0.6
108,695	-		IAI46_00480	0.60	+0.0
108,715	-		IAI46_00480	0.62	-1.4
108,748	+		IAI46_00480	0.65	-0.0
108,749	-		IAI46_00480	0.65	-0.6
108,749	-		IAI46_00480	0.65	+0.1
108,749	-		IAI46_00480	0.65	-0.2
108,788	+		IAI46_00480	0.69	+0.3
108,789	-		IAI46_00480	0.69	-0.2