Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3361

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
3,967,143	+				+1.6
3,967,143	+				+0.7
3,967,159	-				-1.3
3,967,159	-				-0.7
3,967,218	+				+0.4
3,967,218	+				+0.8
3,967,221	-				-2.8
3,967,227	+				+1.6
3,967,336	-		Echvi_3360	0.10	-2.8
3,967,336	-		Echvi_3360	0.10	+0.4
3,967,359	+		Echvi_3360	0.13	+0.1
3,967,359	+		Echvi_3360	0.13	+0.3
3,967,359	+		Echvi_3360	0.13	-1.0
3,967,359	+		Echvi_3360	0.13	-1.1
3,967,359	+		Echvi_3360	0.13	+1.0
3,967,359	+		Echvi_3360	0.13	-0.3
3,967,360	-		Echvi_3360	0.13	+0.9
3,967,366	-		Echvi_3360	0.14	+0.1
3,967,366	-		Echvi_3360	0.14	-0.6
3,967,366	-		Echvi_3360	0.14	-0.6
3,967,468	+		Echvi_3360	0.26	+0.0
3,967,469	-		Echvi_3360	0.26	-2.1
3,967,469	-		Echvi_3360	0.26	+0.6
3,967,469	-		Echvi_3360	0.26	+1.0
3,967,469	-		Echvi_3360	0.26	-0.8
3,967,472	+		Echvi_3360	0.26	-0.0
3,967,473	-		Echvi_3360	0.27	-2.4
3,967,473	-		Echvi_3360	0.27	-1.1
3,967,503	-		Echvi_3360	0.30	-1.1
3,967,533	-		Echvi_3360	0.34	-1.9
3,967,644	+		Echvi_3360	0.47	+0.9
3,967,644	+				+2.0
3,967,816	-		Echvi_3360	0.67	+1.3
3,967,840	+		Echvi_3360	0.70	+0.7
3,967,841	-		Echvi_3360	0.70	-0.7
3,967,874	+		Echvi_3360	0.74	+1.5
3,967,875	-		Echvi_3360	0.74	+0.2
3,967,893	+		Echvi_3360	0.76	-0.9
3,967,893	+		Echvi_3360	0.76	-0.2
3,967,894	-		Echvi_3360	0.77	-0.4
3,967,895	+		Echvi_3360	0.77	+0.9
3,967,896	-		Echvi_3360	0.77	-1.8
3,967,906	+		Echvi_3360	0.78	-0.4
3,967,906	+		Echvi_3360	0.78	-0.4
3,967,907	-		Echvi_3360	0.78	-1.8
3,967,987	+		Echvi_3360	0.88	+0.7
3,967,987	+		Echvi_3360	0.88	+0.1
3,967,988	-		Echvi_3360	0.88	-0.0
3,968,015	+				+0.1
3,968,016	-				-1.4
3,968,106	+				-1.0
3,968,107	-				+0.5
3,968,231	+		Echvi_3361	0.19	+1.4
3,968,286	-		Echvi_3361	0.26	-0.9
3,968,344	-		Echvi_3361	0.33	+1.9
3,968,344	-		Echvi_3361	0.33	-1.3
3,968,397	+		Echvi_3361	0.40	+0.6
3,968,429	-		Echvi_3361	0.44	+0.2
3,968,439	+		Echvi_3361	0.45	+1.2
3,968,439	+		Echvi_3361	0.45	+0.6
3,968,520	+		Echvi_3361	0.56	+1.0
3,968,521	-		Echvi_3361	0.56	-0.7
3,968,527	+		Echvi_3361	0.57	+0.1
3,968,535	-		Echvi_3361	0.58	-0.1
3,968,597	-		Echvi_3361	0.65	+0.5
3,968,636	-		Echvi_3361	0.70	+0.7
3,968,636	-		Echvi_3361	0.70	+0.6
3,968,638	+		Echvi_3361	0.71	+0.8
3,968,639	-		Echvi_3361	0.71	-1.0
3,968,669	-		Echvi_3361	0.75	+0.1
3,968,691	-		Echvi_3361	0.77	+1.0
3,968,692	+		Echvi_3361	0.77	+1.4
3,968,699	+		Echvi_3361	0.78	+0.1
3,968,700	-		Echvi_3361	0.78	+0.3
3,968,701	+		Echvi_3361	0.79	-0.6
3,968,713	+		Echvi_3361	0.80	+0.8
3,968,785	+		Echvi_3361	0.89	+0.4
3,968,821	+				+1.3
3,968,822	-				-1.0
3,968,824	+				+0.3
3,968,825	-				+1.2
3,968,828	+				+0.6
3,968,829	-				+0.4
3,968,829	-				-0.4
3,968,829	-				-1.1
3,968,851	-				-2.7
3,968,890	+				-0.7
3,968,984	+		Echvi_3362	0.18	-1.8
3,969,004	+		Echvi_3362	0.22	-2.4
3,969,004	+		Echvi_3362	0.22	-1.8
3,969,004	+		Echvi_3362	0.22	-0.7
3,969,005	-		Echvi_3362	0.22	+0.2
3,969,005	-		Echvi_3362	0.22	-1.6
3,969,005	-		Echvi_3362	0.22	-2.1
3,969,007	-		Echvi_3362	0.22	-1.7
3,969,007	-		Echvi_3362	0.22	+0.3
3,969,024	+		Echvi_3362	0.25	-2.1
3,969,024	+		Echvi_3362	0.25	-1.0
3,969,026	+		Echvi_3362	0.26	-1.3
3,969,027	-		Echvi_3362	0.26	-2.4
3,969,027	-		Echvi_3362	0.26	-0.3
3,969,068	+		Echvi_3362	0.33	-0.1
3,969,069	-		Echvi_3362	0.33	-1.9
3,969,069	-		Echvi_3362	0.33	-2.1
3,969,069	-		Echvi_3362	0.33	-1.5
3,969,093	-		Echvi_3362	0.38	-1.7
3,969,156	+		Echvi_3362	0.49	-1.1
3,969,173	-		Echvi_3362	0.52	-0.9
3,969,173	-		Echvi_3362	0.52	-1.5
3,969,173	-		Echvi_3362	0.52	-3.4
3,969,348	+		Echvi_3362	0.83	-0.2
3,969,354	-		Echvi_3362	0.84	-1.8
3,969,398	+				-1.6
3,969,448	-				-0.2
3,969,501	-				-2.3
3,969,527	+				-0.2
3,969,563	-				-0.4
3,969,626	+				-0.1
3,969,626	+				-1.8
3,969,626	+				-0.0
3,969,627	-				+0.5
3,969,668	-				-0.7
3,969,733	-		Echvi_3363	0.11	+0.5
3,969,742	+		Echvi_3363	0.12	+0.0
3,969,757	+		Echvi_3363	0.14	-1.4
3,969,777	-		Echvi_3363	0.16	+0.2
3,969,797	+		Echvi_3363	0.18	+1.4
3,969,809	+		Echvi_3363	0.20	-0.3
3,969,809	+		Echvi_3363	0.20	-0.6
3,969,820	+		Echvi_3363	0.21	-0.9
3,969,820	+		Echvi_3363	0.21	+1.1
3,969,820	+		Echvi_3363	0.21	+1.0
3,969,863	+		Echvi_3363	0.25	-0.6
3,969,864	-		Echvi_3363	0.25	-0.6
3,969,864	-		Echvi_3363	0.25	-0.9
3,969,864	-		Echvi_3363	0.25	-0.1