Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3252

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
3,856,641	-		Echvi_3250	0.86	-3.9
3,856,641	-		Echvi_3250	0.86	-3.1
3,856,641	-		Echvi_3250	0.86	-3.8
3,856,641	-		Echvi_3250	0.86	-1.4
3,856,642	+		Echvi_3250	0.87	+0.9
3,856,682	+				-0.7
3,856,682	+				-1.1
3,856,682	+				+1.9
3,856,682	+				+0.1
3,856,682	+				-0.5
3,856,682	+				+0.6
3,856,682	+				-0.1
3,856,683	-				-3.0
3,856,683	-				-4.2
3,856,684	+				+0.1
3,856,684	+				+0.3
3,856,684	+				-0.3
3,856,684	+				+0.5
3,856,685	-				-3.6
3,856,685	-				-2.6
3,856,740	+				-2.8
3,856,755	-				-3.5
3,856,816	-				-3.5
3,856,816	-				-2.3
3,856,867	+				-1.1
3,856,868	-				-3.8
3,856,880	+		Echvi_3251	0.11	-1.2
3,856,883	-		Echvi_3251	0.11	-1.2
3,856,883	-		Echvi_3251	0.11	-4.0
3,856,883	-		Echvi_3251	0.11	-2.7
3,856,910	+		Echvi_3251	0.15	+0.4
3,856,914	+		Echvi_3251	0.15	-1.1
3,856,915	-		Echvi_3251	0.16	-0.1
3,856,927	+		Echvi_3251	0.17	-1.0
3,856,928	-		Echvi_3251	0.17	-1.5
3,856,928	-		Echvi_3251	0.17	-4.2
3,856,930	+		Echvi_3251	0.18	-0.7
3,857,028	-		Echvi_3251	0.31	-2.6
3,857,028	-		Echvi_3251	0.31	-3.3
3,857,035	+		Echvi_3251	0.32	+0.7
3,857,036	-		Echvi_3251	0.32	-1.2
3,857,040	+		Echvi_3251	0.33	-0.3
3,857,041	-		Echvi_3251	0.33	-4.8
3,857,056	-		Echvi_3251	0.35	-4.5
3,857,058	+		Echvi_3251	0.35	-0.5
3,857,058	+		Echvi_3251	0.35	-0.2
3,857,059	-		Echvi_3251	0.35	-3.6
3,857,060	+		Echvi_3251	0.35	+0.4
3,857,060	+		Echvi_3251	0.35	+0.1
3,857,060	+		Echvi_3251	0.35	-0.5
3,857,060	+		Echvi_3251	0.35	+0.1
3,857,060	+		Echvi_3251	0.35	-0.3
3,857,061	-		Echvi_3251	0.35	-0.3
3,857,061	-		Echvi_3251	0.35	-2.1
3,857,061	-		Echvi_3251	0.35	-2.5
3,857,061	-		Echvi_3251	0.35	-5.2
3,857,061	-		Echvi_3251	0.35	-3.7
3,857,118	+		Echvi_3251	0.43	+0.9
3,857,118	+		Echvi_3251	0.43	+0.0
3,857,118	+		Echvi_3251	0.43	+1.1
3,857,118	+		Echvi_3251	0.43	+0.3
3,857,157	+		Echvi_3251	0.48	-2.1
3,857,158	-		Echvi_3251	0.49	-4.5
3,857,158	-		Echvi_3251	0.49	-3.5
3,857,159	+		Echvi_3251	0.49	-0.2
3,857,160	-		Echvi_3251	0.49	-0.3
3,857,160	-		Echvi_3251	0.49	-2.1
3,857,191	-		Echvi_3251	0.53	-1.4
3,857,202	-		Echvi_3251	0.54	-4.3
3,857,232	+		Echvi_3251	0.59	+3.2
3,857,232	+		Echvi_3251	0.59	-1.1
3,857,233	-		Echvi_3251	0.59	-2.2
3,857,239	+		Echvi_3251	0.59	-2.0
3,857,240	-		Echvi_3251	0.60	-1.8
3,857,292	+		Echvi_3251	0.67	-2.4
3,857,292	+		Echvi_3251	0.67	+0.9
3,857,293	-		Echvi_3251	0.67	-3.6
3,857,293	-		Echvi_3251	0.67	-2.1
3,857,293	-		Echvi_3251	0.67	-3.9
3,857,293	-		Echvi_3251	0.67	-2.6
3,857,293	-		Echvi_3251	0.67	-4.0
3,857,298	+		Echvi_3251	0.67	-1.7
3,857,299	-		Echvi_3251	0.68	-2.7
3,857,327	-		Echvi_3251	0.71	-2.4
3,857,364	-		Echvi_3251	0.76	-1.3
3,857,457	-		Echvi_3251	0.89	-2.7
3,857,457	-		Echvi_3251	0.89	-2.5
3,857,461	-		Echvi_3251	0.90	-4.3
3,857,478	-				-1.2
3,857,484	+				+0.5
3,857,485	-				-3.3
3,857,485	-				-4.6
3,857,523	+				+0.6
3,857,549	+				+0.2
3,857,600	-				-2.1
3,857,604	+				+0.2
3,857,613	-				-5.4
3,857,620	-				-1.2
3,857,622	-				-1.1
3,857,665	-				-4.3
3,857,743	-		Echvi_3252	0.19	-3.3
3,857,860	+		Echvi_3252	0.37	-1.9
3,857,861	-		Echvi_3252	0.37	-3.8
3,857,861	-		Echvi_3252	0.37	-0.5
3,857,873	+		Echvi_3252	0.39	+1.2
3,857,917	+		Echvi_3252	0.46	+1.2
3,857,935	-		Echvi_3252	0.49	-2.8
3,857,935	-		Echvi_3252	0.49	-1.4
3,857,935	-		Echvi_3252	0.49	-3.3
3,857,935	-		Echvi_3252	0.49	-3.4
3,857,938	+		Echvi_3252	0.49	-0.3
3,857,966	-		Echvi_3252	0.53	-3.9
3,857,978	-		Echvi_3252	0.55	-3.4
3,857,990	-		Echvi_3252	0.57	-2.4
3,858,120	-		Echvi_3252	0.77	-0.7
3,858,244	+				-0.6
3,858,282	+				-0.9
3,858,282	+				-0.6
3,858,287	-				-4.9
3,858,327	-				-2.2
3,858,327	-				-1.0
3,858,333	-				-6.3
3,858,333	-				-2.8
3,858,440	+		Echvi_3253	0.18	-1.8
3,858,462	+		Echvi_3253	0.20	-0.6
3,858,462	+		Echvi_3253	0.20	-0.1
3,858,481	+		Echvi_3253	0.23	+0.1
3,858,482	-		Echvi_3253	0.23	-1.2
3,858,523	+		Echvi_3253	0.28	+0.2
3,858,532	+		Echvi_3253	0.29	+0.2
3,858,533	-		Echvi_3253	0.29	-3.7
3,858,544	+		Echvi_3253	0.30	+0.4
3,858,545	-		Echvi_3253	0.30	-5.1
3,858,553	+		Echvi_3253	0.31	-0.2
3,858,553	+		Echvi_3253	0.31	-0.2
3,858,557	-		Echvi_3253	0.32	-0.5
3,858,557	-		Echvi_3253	0.32	-1.7
3,858,557	-		Echvi_3253	0.32	-2.9
3,858,563	-		Echvi_3253	0.32	-1.4
3,858,563	-		Echvi_3253	0.32	-3.4
3,858,564	+		Echvi_3253	0.32	-2.3
3,858,564	+		Echvi_3253	0.32	-0.1
3,858,564	+		Echvi_3253	0.32	+0.2
3,858,564	+		Echvi_3253	0.32	-0.9
3,858,564	+		Echvi_3253	0.32	+1.5
3,858,565	-		Echvi_3253	0.33	-2.3
3,858,565	-		Echvi_3253	0.33	-1.8
3,858,565	-		Echvi_3253	0.33	-1.8
3,858,565	-		Echvi_3253	0.33	-1.0
3,858,565	-		Echvi_3253	0.33	-3.1
3,858,565	-		Echvi_3253	0.33	-2.4
3,858,565	-		Echvi_3253	0.33	-2.4
3,858,565	-		Echvi_3253	0.33	-1.6
3,858,565	-		Echvi_3253	0.33	-3.0
3,858,565	-		Echvi_3253	0.33	-2.7
3,858,565	-		Echvi_3253	0.33	-2.8
3,858,628	+		Echvi_3253	0.40	+0.2
3,858,668	-		Echvi_3253	0.45	-4.3
3,858,681	+		Echvi_3253	0.47	-0.2
3,858,688	+		Echvi_3253	0.47	-0.6
3,858,688	+		Echvi_3253	0.47	+2.0
3,858,710	+		Echvi_3253	0.50	-0.3
3,858,792	+		Echvi_3253	0.60	-0.1
3,858,793	-		Echvi_3253	0.60	-3.6
3,858,849	-		Echvi_3253	0.67	-0.1
3,858,888	-		Echvi_3253	0.71	-2.0
3,858,892	+		Echvi_3253	0.72	+1.5
3,858,910	-		Echvi_3253	0.74	-3.2
3,858,985	+		Echvi_3253	0.83	+0.3
3,859,024	-		Echvi_3253	0.88	-3.0
3,859,064	-				-2.3
3,859,071	-				-4.2
3,859,071	-				-1.7
3,859,080	-				-2.4
3,859,125	-				-5.3
3,859,154	+				+1.7
3,859,170	+				-0.2
3,859,170	+				+0.5
3,859,170	+				+0.6
3,859,170	+				-0.9
3,859,170	+				-0.2
3,859,170	+				-0.3
3,859,170	+				+1.1
3,859,170	+				+0.9
3,859,170	+				+0.8
3,859,171	-				-4.8
3,859,177	+				-1.0
3,859,191	+				-0.1
3,859,191	+				+1.0
3,859,192	-				-3.2
3,859,225	+				-1.9
3,859,259	-				-2.7