Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3116

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
3,724,125	-				-0.2
3,724,153	+				-0.0
3,724,181	-				-0.3
3,724,233	+				+0.4
3,724,234	-				+1.3
3,724,247	+				+0.5
3,724,247	+				+1.2
3,724,349	+				-0.5
3,724,350	-				+0.2
3,724,392	-				-0.1
3,724,470	-		Echvi_3115	0.22	+0.5
3,724,470	-		Echvi_3115	0.22	-0.5
3,724,472	+		Echvi_3115	0.23	+0.0
3,724,501	-		Echvi_3115	0.27	-1.1
3,724,501	-		Echvi_3115	0.27	+0.0
3,724,501	-		Echvi_3115	0.27	-0.1
3,724,501	-		Echvi_3115	0.27	+0.8
3,724,506	+		Echvi_3115	0.28	-1.7
3,724,507	-		Echvi_3115	0.28	-0.5
3,724,507	-		Echvi_3115	0.28	+0.7
3,724,507	-		Echvi_3115	0.28	-0.2
3,724,507	-		Echvi_3115	0.28	-0.5
3,724,507	-		Echvi_3115	0.28	-0.0
3,724,507	-		Echvi_3115	0.28	+0.1
3,724,589	-		Echvi_3115	0.42	+0.6
3,724,589	-		Echvi_3115	0.42	+0.2
3,724,624	+		Echvi_3115	0.47	+1.3
3,724,640	-		Echvi_3115	0.50	-0.0
3,724,730	+		Echvi_3115	0.64	+1.9
3,724,731	-		Echvi_3115	0.65	-2.1
3,724,753	-		Echvi_3115	0.68	-1.7
3,724,753	-		Echvi_3115	0.68	+0.5
3,724,753	-		Echvi_3115	0.68	+1.3
3,724,753	-		Echvi_3115	0.68	-0.7
3,724,753	-		Echvi_3115	0.68	+0.3
3,724,753	-		Echvi_3115	0.68	-1.0
3,724,757	+		Echvi_3115	0.69	+0.4
3,724,758	-		Echvi_3115	0.69	-1.3
3,724,758	-		Echvi_3115	0.69	+0.0
3,724,764	-		Echvi_3115	0.70	+0.0
3,724,764	-		Echvi_3115	0.70	+0.0
3,724,764	-		Echvi_3115	0.70	+0.1
3,724,830	-		Echvi_3115	0.81	-0.1
3,724,893	-				-0.7
3,724,893	-				-0.4
3,724,896	+				+1.8
3,724,896	+				+0.5
3,724,896	+				-1.5
3,724,896	+				-0.6
3,724,896	+				+0.4
3,724,897	-				+0.2
3,724,897	-				+0.2
3,724,897	-				-0.9
3,724,897	-				-1.1
3,724,897	-				+0.5
3,724,897	-				-0.5
3,724,897	-				-1.9
3,724,902	+				+0.8
3,724,902	+				+0.2
3,724,903	-				-0.1
3,724,903	-				+0.3
3,724,904	+				+1.0
3,724,905	-				+0.1
3,724,905	-				-1.4
3,724,954	-				+0.3
3,724,968	+				+0.5
3,724,968	+				+0.3
3,724,969	-				-0.6
3,725,052	+				+0.8
3,725,054	+				+0.6
3,725,055	-				-2.3
3,725,116	+				-0.8
3,725,164	+				+0.8
3,725,264	-		Echvi_3116	0.26	-1.1
3,725,264	-		Echvi_3116	0.26	-0.1
3,725,264	-		Echvi_3116	0.26	-2.0
3,725,401	+		Echvi_3116	0.49	-0.1
3,725,437	+		Echvi_3116	0.55	-0.7
3,725,510	-		Echvi_3116	0.67	+0.1
3,725,510	-		Echvi_3116	0.67	+0.1
3,725,510	-		Echvi_3116	0.67	-0.4
3,725,510	-		Echvi_3116	0.67	-0.0
3,725,510	-		Echvi_3116	0.67	+0.4
3,725,525	+		Echvi_3116	0.69	-0.6
3,725,544	+		Echvi_3116	0.72	+1.2
3,725,544	+		Echvi_3116	0.72	-1.6
3,725,544	+		Echvi_3116	0.72	+0.2
3,725,545	-		Echvi_3116	0.72	-2.3
3,725,556	+		Echvi_3116	0.74	+0.4
3,725,557	-		Echvi_3116	0.74	-0.2
3,725,646	+		Echvi_3116	0.89	+0.5
3,725,649	+		Echvi_3116	0.90	-0.1
3,725,649	+		Echvi_3116	0.90	-0.9
3,725,649	+		Echvi_3116	0.90	-0.0
3,725,649	+		Echvi_3116	0.90	-1.3
3,725,649	+		Echvi_3116	0.90	+1.7
3,725,650	-				-1.1
3,725,650	-				-1.0
3,725,650	-				+0.4
3,725,650	-				+0.0
3,725,654	+				-0.5
3,725,654	+				-2.3
3,725,678	-				+3.0
3,725,699	-				+0.6
3,725,715	-				+0.5
3,725,754	+				-0.0
3,725,754	+				-0.1
3,725,755	-				-0.3
3,725,785	-				-1.0
3,725,803	+				+0.2
3,725,814	+				-0.1
3,725,851	+				+0.7
3,725,852	-				+0.6
3,725,852	-				+0.1
3,725,886	-				-2.2
3,725,938	+				+0.6
3,725,939	-				-0.5
3,725,939	-				-0.0
3,725,970	+				-1.3
3,725,970	+				-0.5
3,725,970	+				+1.3
3,725,971	-				-0.8
3,725,971	-				+0.2
3,725,971	-				+0.0
3,726,025	-				+0.6
3,726,025	-				-0.1
3,726,028	-				+0.2
3,726,028	-				-0.6
3,726,193	+		Echvi_3117	0.16	+0.0
3,726,193	+				+1.2
3,726,193	+		Echvi_3117	0.16	-0.0
3,726,194	-		Echvi_3117	0.16	+0.2
3,726,194	-		Echvi_3117	0.16	-1.1
3,726,217	+		Echvi_3117	0.18	-1.5
3,726,217	+		Echvi_3117	0.18	+0.9
3,726,254	+		Echvi_3117	0.21	-0.7
3,726,254	+		Echvi_3117	0.21	+1.2
3,726,255	-		Echvi_3117	0.21	+1.3
3,726,255	-		Echvi_3117	0.21	-0.7
3,726,255	-		Echvi_3117	0.21	-0.5
3,726,255	-		Echvi_3117	0.21	+0.3
3,726,275	+		Echvi_3117	0.22	-0.2
3,726,298	-		Echvi_3117	0.24	+0.0
3,726,369	+		Echvi_3117	0.29	-0.1
3,726,372	-		Echvi_3117	0.30	-0.5
3,726,372	-		Echvi_3117	0.30	+0.4
3,726,432	+		Echvi_3117	0.34	-1.1
3,726,493	-		Echvi_3117	0.39	-0.9
3,726,493	-		Echvi_3117	0.39	-0.2
3,726,532	+		Echvi_3117	0.42	+0.5
3,726,564	+		Echvi_3117	0.44	+0.8
3,726,565	-		Echvi_3117	0.44	+0.5
3,726,585	+		Echvi_3117	0.46	-0.3
3,726,609	+		Echvi_3117	0.47	-0.4
3,726,635	+		Echvi_3117	0.49	+0.3
3,726,635	+		Echvi_3117	0.49	+0.1
3,726,635	+		Echvi_3117	0.49	+0.2
3,726,645	-		Echvi_3117	0.50	-0.3
3,726,698	-		Echvi_3117	0.54	-0.1
3,726,698	-		Echvi_3117	0.54	-1.7