Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2478

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,941,163	-				+0.3
2,941,163	-				-0.1
2,941,213	+				-0.8
2,941,214	-				-0.4
2,941,214	-				-2.1
2,941,289	-				-0.4
2,941,298	-				-0.9
2,941,398	-				+0.2
2,941,419	+				-1.6
2,941,420	-				-1.4
2,941,420	-				-0.3
2,941,423	+				-2.0
2,941,477	-				-1.1
2,941,500	-				+1.7
2,941,513	+				+0.3
2,941,546	-				-0.0
2,941,556	+				-1.8
2,941,557	-				+0.8
2,941,557	-				+1.2
2,941,565	+				+1.5
2,941,565	+				-0.4
2,941,566	-				-0.5
2,941,581	+				+0.4
2,941,590	+				-0.1
2,941,609	+				+1.0
2,941,609	+				+1.4
2,941,610	-				-0.0
2,941,610	-				+0.7
2,941,659	-		Echvi_2477	0.16	+0.7
2,941,668	+		Echvi_2477	0.18	+0.6
2,941,668	+		Echvi_2477	0.18	-1.0
2,941,689	-		Echvi_2477	0.22	-0.2
2,941,700	+		Echvi_2477	0.24	+1.4
2,941,724	-		Echvi_2477	0.28	+0.1
2,941,764	-		Echvi_2477	0.36	+0.1
2,941,769	+		Echvi_2477	0.37	+0.5
2,941,770	-		Echvi_2477	0.37	+0.3
2,941,777	+		Echvi_2477	0.38	-0.5
2,941,866	+		Echvi_2477	0.55	-0.7
2,941,867	-		Echvi_2477	0.55	-0.5
2,941,886	+		Echvi_2477	0.59	-0.7
2,941,889	-		Echvi_2477	0.59	-0.4
2,941,889	-		Echvi_2477	0.59	-0.7
2,941,889	-		Echvi_2477	0.59	+0.2
2,941,903	+		Echvi_2477	0.62	-0.9
2,941,940	-		Echvi_2477	0.69	+1.0
2,942,044	+		Echvi_2477	0.88	-0.4
2,942,044	+		Echvi_2477	0.88	+1.6
2,942,046	+		Echvi_2477	0.88	-0.2
2,942,047	-		Echvi_2477	0.89	+1.1
2,942,047	-		Echvi_2477	0.89	+1.2
2,942,047	-		Echvi_2477	0.89	-0.5
2,942,051	-		Echvi_2477	0.89	+0.4
2,942,122	-				+0.0
2,942,122	-				+0.5
2,942,125	-				-0.7
2,942,125	-				+0.1
2,942,132	+				+0.2
2,942,188	+				-0.6
2,942,258	+		Echvi_2478	0.24	-1.9
2,942,268	+		Echvi_2478	0.26	+0.2
2,942,268	+		Echvi_2478	0.26	-0.3
2,942,268	+		Echvi_2478	0.26	+1.2
2,942,268	+		Echvi_2478	0.26	+0.8
2,942,268	+		Echvi_2478	0.26	+0.0
2,942,269	-		Echvi_2478	0.26	-1.1
2,942,269	-		Echvi_2478	0.26	-2.5
2,942,269	-		Echvi_2478	0.26	+2.1
2,942,269	-		Echvi_2478	0.26	-1.1
2,942,327	+		Echvi_2478	0.38	+0.0
2,942,343	+		Echvi_2478	0.41	+0.1
2,942,344	-		Echvi_2478	0.41	-0.8
2,942,344	-		Echvi_2478	0.41	-0.1
2,942,344	-		Echvi_2478	0.41	+0.4
2,942,344	-		Echvi_2478	0.41	-0.2
2,942,344	-		Echvi_2478	0.41	+0.1
2,942,359	+		Echvi_2478	0.44	-2.3
2,942,376	+		Echvi_2478	0.48	-2.5
2,942,406	+		Echvi_2478	0.54	+0.6
2,942,416	+		Echvi_2478	0.56	-1.2
2,942,429	+		Echvi_2478	0.58	-0.5
2,942,430	-		Echvi_2478	0.58	-0.6
2,942,430	-		Echvi_2478	0.58	-3.0
2,942,537	-		Echvi_2478	0.80	-0.3
2,942,610	+				-0.4
2,942,611	-				+0.1
2,942,625	+				+1.1
2,942,653	+				-0.7
2,942,653	+				-1.4
2,942,653	+				+0.1
2,942,653	+				+1.5
2,942,653	+				-0.5
2,942,653	+				-0.0
2,942,654	-				+0.5
2,942,654	-				-0.2
2,942,656	-				-0.5
2,942,656	-				+0.3
2,942,733	+				+0.4
2,942,734	-				+1.5
2,942,734	-				-0.9
2,942,734	-				-0.3
2,942,743	+				-1.5
2,942,785	+				-0.4
2,942,788	-				-1.2
2,942,797	+				-0.3
2,942,797	+				-1.4
2,942,797	+				+1.1
2,942,798	-				-1.3
2,942,798	-				-0.0
2,942,798	-				-0.2
2,942,798	-				-1.1
2,942,798	-				+0.6
2,942,800	+				-0.6
2,942,800	+				-0.0
2,942,801	-				+0.0
2,942,922	-		Echvi_2479	0.15	+0.1
2,942,961	+		Echvi_2479	0.20	+1.9
2,942,999	+		Echvi_2479	0.24	+0.1
2,943,070	+		Echvi_2479	0.33	+0.4
2,943,070	+		Echvi_2479	0.33	-0.7
2,943,070	+		Echvi_2479	0.33	+0.7
2,943,070	+		Echvi_2479	0.33	+1.4
2,943,070	+		Echvi_2479	0.33	-0.6
2,943,070	+		Echvi_2479	0.33	+0.1
2,943,070	+		Echvi_2479	0.33	+0.1
2,943,070	+		Echvi_2479	0.33	+0.7
2,943,070	+		Echvi_2479	0.33	-0.5
2,943,071	-		Echvi_2479	0.33	+0.3
2,943,071	-		Echvi_2479	0.33	+0.7
2,943,071	-		Echvi_2479	0.33	-0.6
2,943,071	-		Echvi_2479	0.33	-0.1
2,943,071	-		Echvi_2479	0.33	+1.2
2,943,071	-		Echvi_2479	0.33	-0.8
2,943,071	-		Echvi_2479	0.33	+1.4
2,943,071	-		Echvi_2479	0.33	+1.1
2,943,146	+		Echvi_2479	0.43	+0.7
2,943,146	+		Echvi_2479	0.43	-0.8
2,943,234	+		Echvi_2479	0.54	-0.4
2,943,237	-		Echvi_2479	0.54	+1.5
2,943,273	+		Echvi_2479	0.59	+0.2
2,943,274	-		Echvi_2479	0.59	-1.1
2,943,283	+		Echvi_2479	0.60	+1.0
2,943,355	-		Echvi_2479	0.69	+1.4
2,943,380	+		Echvi_2479	0.72	+0.1
2,943,380	+		Echvi_2479	0.72	+0.9
2,943,380	+		Echvi_2479	0.72	+0.2
2,943,380	+		Echvi_2479	0.72	-0.6
2,943,380	+		Echvi_2479	0.72	-0.1
2,943,381	-		Echvi_2479	0.72	+0.6
2,943,381	-		Echvi_2479	0.72	+0.6
2,943,382	+		Echvi_2479	0.72	-0.2
2,943,432	-		Echvi_2479	0.79	-0.1
2,943,432	-		Echvi_2479	0.79	+0.2
2,943,576	+				+0.9
2,943,576	+				-1.0
2,943,576	+				-0.7
2,943,577	-				+0.2
2,943,577	-				-1.3