Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2455

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,914,192	+				-1.0
2,914,277	-		Echvi_2454	0.12	-0.3
2,914,317	+		Echvi_2454	0.17	+0.3
2,914,338	-		Echvi_2454	0.20	-0.3
2,914,380	+		Echvi_2454	0.25	-3.1
2,914,381	-		Echvi_2454	0.25	+0.8
2,914,382	+		Echvi_2454	0.25	-0.5
2,914,400	+		Echvi_2454	0.28	-0.6
2,914,401	-		Echvi_2454	0.28	-1.0
2,914,401	-		Echvi_2454	0.28	-0.1
2,914,401	-		Echvi_2454	0.28	+0.4
2,914,427	+		Echvi_2454	0.31	-0.4
2,914,427	+		Echvi_2454	0.31	-1.5
2,914,428	-		Echvi_2454	0.31	-1.6
2,914,428	-		Echvi_2454	0.31	+1.0
2,914,428	-		Echvi_2454	0.31	-0.8
2,914,428	-		Echvi_2454	0.31	+0.0
2,914,436	+		Echvi_2454	0.32	+0.7
2,914,437	-		Echvi_2454	0.32	+0.5
2,914,437	-		Echvi_2454	0.32	-0.3
2,914,437	-		Echvi_2454	0.32	+0.7
2,914,444	-		Echvi_2454	0.33	+0.2
2,914,490	-		Echvi_2454	0.39	-0.1
2,914,506	-		Echvi_2454	0.41	-0.7
2,914,509	+		Echvi_2454	0.41	-2.1
2,914,510	-		Echvi_2454	0.42	-0.8
2,914,521	+		Echvi_2454	0.43	+0.1
2,914,569	-		Echvi_2454	0.49	+0.4
2,914,609	+		Echvi_2454	0.54	+0.0
2,914,690	+		Echvi_2454	0.65	+0.6
2,914,691	-		Echvi_2454	0.65	-0.0
2,914,709	+		Echvi_2454	0.67	-0.5
2,914,709	+		Echvi_2454	0.67	+0.9
2,914,751	+		Echvi_2454	0.72	-1.9
2,914,751	+		Echvi_2454	0.72	+0.0
2,914,893	-				-1.2
2,914,908	+				+0.6
2,914,930	-				+0.1
2,914,941	+				+0.1
2,914,941	+				+0.7
2,914,941	+				+1.6
2,914,942	-				-0.7
2,914,942	-				-2.0
2,914,942	-				-0.1
2,914,942	-				-0.1
2,914,942	-				-0.7
2,914,942	-				-1.5
2,914,942	-				-0.2
2,914,942	-				-0.0
2,914,958	-				+1.4
2,914,981	-				-0.2
2,915,164	+				+0.6
2,915,164	+				+0.8
2,915,198	+		Echvi_2455	0.17	+0.9
2,915,199	-		Echvi_2455	0.18	+0.2
2,915,199	-		Echvi_2455	0.18	+0.6
2,915,275	+		Echvi_2455	0.36	+2.4
2,915,291	-		Echvi_2455	0.39	-0.1
2,915,312	-		Echvi_2455	0.44	-0.6
2,915,362	+		Echvi_2455	0.56	+1.4
2,915,385	-		Echvi_2455	0.62	+0.1
2,915,411	-		Echvi_2455	0.68	-0.4
2,915,483	+		Echvi_2455	0.85	+1.4
2,915,490	-		Echvi_2455	0.87	-0.4
2,915,520	+				+1.5
2,915,605	+				-1.1
2,915,612	+				+1.0
2,915,612	+				+1.0
2,915,688	+		Echvi_2456	0.11	-1.5
2,915,689	-		Echvi_2456	0.11	+0.7
2,915,720	-		Echvi_2456	0.14	+0.4
2,915,765	+		Echvi_2456	0.18	+0.9
2,915,770	+		Echvi_2456	0.19	-1.8
2,915,775	-		Echvi_2456	0.19	-0.2
2,915,775	-		Echvi_2456	0.19	+0.0
2,915,820	+		Echvi_2456	0.23	-1.0
2,915,821	-		Echvi_2456	0.23	-0.2
2,915,821	-		Echvi_2456	0.23	-1.7
2,915,821	-		Echvi_2456	0.23	+0.1
2,915,821	-		Echvi_2456	0.23	+0.9
2,915,821	-		Echvi_2456	0.23	-0.3
2,915,821	-		Echvi_2456	0.23	+0.5
2,915,849	-		Echvi_2456	0.26	-0.4
2,915,864	-		Echvi_2456	0.27	-0.2
2,915,917	+		Echvi_2456	0.32	-0.3
2,915,953	-		Echvi_2456	0.36	-3.0
2,916,061	+		Echvi_2456	0.46	-0.8
2,916,062	-		Echvi_2456	0.46	-0.4
2,916,143	-		Echvi_2456	0.54	+0.6
2,916,185	-		Echvi_2456	0.58	-1.1
2,916,196	+		Echvi_2456	0.59	-0.6
2,916,196	+		Echvi_2456	0.59	-1.0
2,916,271	+		Echvi_2456	0.66	+0.9
2,916,315	+		Echvi_2456	0.70	+0.8
2,916,316	-		Echvi_2456	0.70	-0.5
2,916,340	+		Echvi_2456	0.72	-1.1
2,916,340	+		Echvi_2456	0.72	+0.8
2,916,354	-		Echvi_2456	0.74	+0.4
2,916,354	-		Echvi_2456	0.74	-0.1
2,916,366	-		Echvi_2456	0.75	-0.5
2,916,409	+		Echvi_2456	0.79	+0.1
2,916,423	+		Echvi_2456	0.80	+1.2
2,916,423	+		Echvi_2456	0.80	-1.3
2,916,424	-		Echvi_2456	0.80	+0.0
2,916,424	-		Echvi_2456	0.80	-0.5
2,916,430	-		Echvi_2456	0.81	+0.2
2,916,430	-		Echvi_2456	0.81	-0.6
2,916,430	-		Echvi_2456	0.81	-1.1
2,916,430	-		Echvi_2456	0.81	-0.5
2,916,430	-		Echvi_2456	0.81	-0.3
2,916,489	-		Echvi_2456	0.86	+0.3
2,916,543	-				-0.2