Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2420

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,870,257	-		Echvi_2419	0.21	-0.8
2,870,257	-		Echvi_2419	0.21	-2.1
2,870,370	+		Echvi_2419	0.31	-0.0
2,870,370	+		Echvi_2419	0.31	-0.5
2,870,418	+		Echvi_2419	0.35	-0.2
2,870,516	-		Echvi_2419	0.43	-1.4
2,870,523	+		Echvi_2419	0.44	+0.9
2,870,523	+		Echvi_2419	0.44	-0.4
2,870,523	+		Echvi_2419	0.44	+0.9
2,870,523	+		Echvi_2419	0.44	-0.6
2,870,523	+		Echvi_2419	0.44	-1.1
2,870,523	+		Echvi_2419	0.44	+1.1
2,870,523	+		Echvi_2419	0.44	+1.5
2,870,524	-		Echvi_2419	0.44	+0.3
2,870,527	+		Echvi_2419	0.44	+0.7
2,870,528	-		Echvi_2419	0.44	-1.4
2,870,565	-		Echvi_2419	0.48	+0.5
2,870,637	-		Echvi_2419	0.54	+0.4
2,870,748	+		Echvi_2419	0.64	-0.0
2,870,748	+		Echvi_2419	0.64	-1.4
2,870,799	+		Echvi_2419	0.68	+0.7
2,870,799	+		Echvi_2419	0.68	+0.1
2,870,799	+		Echvi_2419	0.68	+0.0
2,870,799	+		Echvi_2419	0.68	+2.0
2,870,799	+		Echvi_2419	0.68	-0.7
2,870,799	+		Echvi_2419	0.68	-0.8
2,870,800	-		Echvi_2419	0.68	+0.2
2,870,800	-		Echvi_2419	0.68	+1.1
2,870,800	-		Echvi_2419	0.68	+0.1
2,870,800	-		Echvi_2419	0.68	+0.8
2,870,800	-		Echvi_2419	0.68	+0.5
2,870,800	-		Echvi_2419	0.68	+1.3
2,870,801	+		Echvi_2419	0.69	+0.7
2,870,801	+		Echvi_2419	0.69	+1.0
2,870,803	+		Echvi_2419	0.69	+0.1
2,870,953	+		Echvi_2419	0.82	-0.4
2,870,954	-		Echvi_2419	0.82	-0.7
2,870,984	+		Echvi_2419	0.85	+0.0
2,871,028	+		Echvi_2419	0.89	-0.6
2,871,029	-		Echvi_2419	0.89	+0.4
2,871,029	-		Echvi_2419	0.89	+1.2
2,871,062	+				-0.2
2,871,095	+				+1.0
2,871,115	+				-0.5
2,871,116	-				+2.1
2,871,212	-				-0.1
2,871,222	-				-0.6
2,871,238	+				+1.1
2,871,321	-		Echvi_2420	0.19	+0.6
2,871,371	+		Echvi_2420	0.25	-1.6
2,871,376	+		Echvi_2420	0.25	-0.2
2,871,376	+		Echvi_2420	0.25	-1.0
2,871,376	+		Echvi_2420	0.25	-0.2
2,871,376	+		Echvi_2420	0.25	+2.0
2,871,377	-		Echvi_2420	0.25	+0.7
2,871,423	+		Echvi_2420	0.31	+0.8
2,871,423	+		Echvi_2420	0.31	+1.0
2,871,477	+		Echvi_2420	0.37	+0.5
2,871,478	-		Echvi_2420	0.37	+0.4
2,871,533	+		Echvi_2420	0.43	+1.5
2,871,586	+		Echvi_2420	0.50	+0.0
2,871,590	-		Echvi_2420	0.50	-2.1
2,871,598	-		Echvi_2420	0.51	-0.4
2,871,598	-		Echvi_2420	0.51	+0.1
2,871,655	+		Echvi_2420	0.58	+0.4
2,871,672	+		Echvi_2420	0.60	-0.1
2,871,673	-		Echvi_2420	0.60	-0.6
2,871,673	-		Echvi_2420	0.60	-0.9
2,871,674	+		Echvi_2420	0.60	-0.3
2,871,737	-		Echvi_2420	0.67	-1.2
2,871,737	-		Echvi_2420	0.67	-0.8
2,871,779	-		Echvi_2420	0.72	+0.3
2,871,779	-		Echvi_2420	0.72	+0.1
2,871,782	+		Echvi_2420	0.72	+0.8
2,871,783	-		Echvi_2420	0.73	-1.3
2,871,783	-		Echvi_2420	0.73	+0.2
2,871,783	-		Echvi_2420	0.73	+1.4
2,871,785	+		Echvi_2420	0.73	-1.0
2,871,785	+		Echvi_2420	0.73	+0.7
2,871,786	-		Echvi_2420	0.73	+0.3
2,871,795	+		Echvi_2420	0.74	-1.3
2,871,795	+		Echvi_2420	0.74	+0.2
2,871,847	-		Echvi_2420	0.80	+1.2
2,871,847	-		Echvi_2420	0.80	+0.7
2,871,870	+		Echvi_2420	0.83	-2.2
2,871,886	+		Echvi_2420	0.85	+1.3
2,871,887	-		Echvi_2420	0.85	+1.0
2,871,887	-		Echvi_2420	0.85	+0.5
2,871,991	-				-0.5
2,871,996	+				-0.2
2,871,997	-				+0.6
2,871,997	-				+0.9
2,871,997	-				-0.5
2,872,019	-				-0.4
2,872,019	-				-0.8
2,872,044	-				-0.3
2,872,057	+				+0.6
2,872,057	+				-1.7
2,872,076	+				+1.1
2,872,077	-				-0.3
2,872,077	-				-1.0
2,872,077	-				+1.5
2,872,077	-				-1.5
2,872,268	+				-1.3
2,872,269	-				+0.0
2,872,276	-				-3.0
2,872,393	-				-1.5
2,872,618	+		Echvi_2421	0.26	-3.1
2,872,619	-		Echvi_2421	0.26	-1.7
2,872,638	+		Echvi_2421	0.28	-2.1
2,872,638	+		Echvi_2421	0.28	-3.6
2,872,643	+		Echvi_2421	0.28	-1.7
2,872,644	-		Echvi_2421	0.28	-2.5
2,872,754	-		Echvi_2421	0.36	-2.8
2,872,754	-		Echvi_2421	0.36	-3.8
2,872,754	-		Echvi_2421	0.36	-4.5
2,872,766	-		Echvi_2421	0.37	-2.9
2,872,863	+		Echvi_2421	0.44	-2.9
2,872,864	-		Echvi_2421	0.44	-2.8
2,872,864	-		Echvi_2421	0.44	-2.9
2,872,873	+		Echvi_2421	0.45	-2.9
2,872,873	+		Echvi_2421	0.45	-3.5
2,872,874	-		Echvi_2421	0.45	-1.4
2,872,874	-		Echvi_2421	0.45	-2.7