Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2236

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,660,064	+		Echvi_2235	0.65	+0.1
2,660,065	-		Echvi_2235	0.65	-1.5
2,660,065	-		Echvi_2235	0.65	-0.0
2,660,065	-		Echvi_2235	0.65	-0.5
2,660,095	+		Echvi_2235	0.70	+0.0
2,660,095	+		Echvi_2235	0.70	+1.0
2,660,096	-		Echvi_2235	0.70	-0.4
2,660,096	-		Echvi_2235	0.70	+0.1
2,660,185	+		Echvi_2235	0.84	+0.9
2,660,185	+		Echvi_2235	0.84	-2.5
2,660,197	+		Echvi_2235	0.86	+0.8
2,660,204	+		Echvi_2235	0.87	+0.3
2,660,204	+		Echvi_2235	0.87	+1.1
2,660,205	-		Echvi_2235	0.87	+0.6
2,660,206	+		Echvi_2235	0.88	-1.8
2,660,227	+				-0.5
2,660,343	-				-0.3
2,660,365	-				-0.3
2,660,365	-				+0.6
2,660,441	+				+0.0
2,660,532	+				+0.2
2,660,555	+				-0.6
2,660,555	+				-0.3
2,660,558	+				+1.2
2,660,558	+				-1.4
2,660,626	+				+0.4
2,660,630	-				-0.6
2,660,669	+				-0.6
2,660,670	-				-0.2
2,660,670	-				-0.2
2,660,688	-				-1.1
2,660,689	+				-0.1
2,660,689	+				+1.9
2,660,690	-				-0.1
2,660,690	-				-1.0
2,660,690	-				-1.0
2,660,699	-				-0.2
2,660,703	-				-1.0
2,660,781	+				+0.0
2,660,782	-				+0.1
2,660,782	-				+0.8
2,660,785	+				+0.9
2,660,785	+				+0.0
2,660,785	+				-2.4
2,660,786	-				-1.1
2,660,786	-				-0.7
2,660,794	+				-0.6
2,660,933	+				-0.3
2,660,988	+		Echvi_2236	0.17	+1.0
2,660,988	+		Echvi_2236	0.17	-0.3
2,661,000	+		Echvi_2236	0.23	-2.1
2,661,006	+		Echvi_2236	0.26	+0.3
2,661,006	+		Echvi_2236	0.26	-1.7
2,661,006	+		Echvi_2236	0.26	-1.8
2,661,006	+		Echvi_2236	0.26	-1.4
2,661,006	+		Echvi_2236	0.26	-1.8
2,661,006	+		Echvi_2236	0.26	+0.0
2,661,007	-		Echvi_2236	0.26	+1.6
2,661,013	+		Echvi_2236	0.29	-3.5
2,661,047	+		Echvi_2236	0.45	-0.4
2,661,093	-		Echvi_2236	0.68	-0.4
2,661,133	-		Echvi_2236	0.87	-1.3
2,661,133	-		Echvi_2236	0.87	+0.2
2,661,133	-		Echvi_2236	0.87	+0.9
2,661,133	-		Echvi_2236	0.87	+0.2
2,661,133	-		Echvi_2236	0.87	+0.2
2,661,133	-		Echvi_2236	0.87	-0.7
2,661,141	+				-0.1
2,661,141	+				-0.6
2,661,141	+				+0.8
2,661,142	-				+0.5
2,661,142	-				-0.4
2,661,142	-				+0.3
2,661,142	-				-0.2
2,661,142	-				-0.4
2,661,142	-				+0.1
2,661,142	-				+0.7
2,661,142	-				+1.3
2,661,142	-				-0.0
2,661,142	-				-0.0
2,661,142	-				-0.2
2,661,142	-				-1.6
2,661,152	-				-0.4
2,661,152	-				-1.5
2,661,156	-				+2.0
2,661,156	-				-0.3
2,661,156	-				-0.3
2,661,158	-				+0.8
2,661,165	-				-0.8
2,661,172	+				-1.9
2,661,197	+				-0.1
2,661,197	+				-0.1
2,661,206	+				-1.1
2,661,219	+				-0.0
2,661,231	-				-0.9
2,661,242	-				-1.8
2,661,290	+				+1.6
2,661,290	+				+0.2
2,661,291	-				+0.6
2,661,291	-				-0.3
2,661,307	+				+0.5
2,661,319	+				-1.6
2,661,319	+				-0.7
2,661,320	-				-0.0
2,661,320	-				-0.8
2,661,327	+				+0.7
2,661,327	+				-0.1
2,661,330	+				+2.2
2,661,330	+				+0.1
2,661,331	-				+0.8
2,661,331	-				-2.2
2,661,345	-				-1.4
2,661,357	-				-0.0
2,661,474	-				-0.3
2,661,474	-				-0.1
2,661,474	-				-1.3
2,661,474	-				-0.2
2,661,534	-				+0.3
2,661,535	+				+0.3
2,661,535	+				-0.1
2,661,536	-				-0.1
2,661,536	-				-0.3
2,661,536	-				+1.3
2,661,536	-				-0.3
2,661,536	-				-0.4
2,661,536	-				+0.8
2,661,536	-				-1.4
2,661,539	+				+0.8
2,661,539	+				+0.3
2,661,544	-				-0.3
2,661,561	-				-0.6
2,661,588	-		Echvi_2237	0.19	+3.0
2,661,588	-		Echvi_2237	0.19	+0.0
2,661,669	+		Echvi_2237	0.57	+0.0
2,661,670	-		Echvi_2237	0.58	-0.3
2,661,673	+		Echvi_2237	0.59	-0.1
2,661,673	+		Echvi_2237	0.59	-0.9
2,661,673	+		Echvi_2237	0.59	-0.4
2,661,674	-		Echvi_2237	0.60	-0.4
2,661,699	+		Echvi_2237	0.71	-0.3
2,661,699	+		Echvi_2237	0.71	+0.3
2,661,720	+		Echvi_2237	0.81	+1.0
2,661,720	+		Echvi_2237	0.81	+0.5
2,661,720	+		Echvi_2237	0.81	+1.1
2,661,721	-		Echvi_2237	0.82	-0.2
2,661,721	-		Echvi_2237	0.82	+0.1
2,661,749	+				+1.0
2,661,749	+				+0.2
2,661,804	+				-0.5
2,661,805	-				-1.2
2,661,817	-				-0.4
2,661,822	-				-0.1
2,661,850	+				-0.4
2,661,850	+				-0.1
2,661,850	+				+0.5
2,661,851	-				+0.1
2,661,851	-				+0.7
2,661,851	-				-0.7
2,661,851	-				-0.7
2,661,858	+				-0.3
2,661,859	-				-0.4
2,661,924	-		Echvi_2238	0.12	-1.6
2,661,925	+		Echvi_2238	0.12	-1.1
2,661,963	-		Echvi_2238	0.23	+0.4
2,661,981	-		Echvi_2238	0.28	+1.4
2,662,089	+		Echvi_2238	0.60	-0.0
2,662,089	+		Echvi_2238	0.60	-1.4