Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1719

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
2,027,260	-				+2.7
2,027,260	-				-0.9
2,027,266	-				-0.9
2,027,266	-				-0.3
2,027,302	+				-1.6
2,027,337	+				-0.3
2,027,366	+				+0.0
2,027,366	+				+0.1
2,027,367	-				+0.2
2,027,371	-				-0.0
2,027,376	-				+0.5
2,027,376	-				-0.8
2,027,410	-				+0.6
2,027,557	-		Echvi_1718	0.33	-0.4
2,027,571	+		Echvi_1718	0.35	+1.2
2,027,611	+		Echvi_1718	0.42	-0.1
2,027,612	-		Echvi_1718	0.42	-0.9
2,027,618	+		Echvi_1718	0.43	-0.8
2,027,618	+		Echvi_1718	0.43	+0.2
2,027,618	+		Echvi_1718	0.43	+1.3
2,027,742	-		Echvi_1718	0.63	+0.2
2,027,803	+		Echvi_1718	0.73	+0.9
2,027,803	+		Echvi_1718	0.73	+1.2
2,027,804	-		Echvi_1718	0.73	-0.8
2,027,891	+		Echvi_1718	0.88	-1.3
2,027,892	-		Echvi_1718	0.88	-0.1
2,027,900	+		Echvi_1718	0.89	+0.3
2,027,901	-		Echvi_1718	0.89	+0.0
2,027,963	-				-0.1
2,027,976	+				+1.6
2,027,980	+				-0.5
2,027,981	-				-2.2
2,028,004	-				-0.7
2,028,004	-				-0.2
2,028,004	-				+1.1
2,028,082	+				+0.4
2,028,083	-				-0.5
2,028,083	-				-0.2
2,028,093	+				-1.0
2,028,122	-				+0.8
2,028,146	-				-0.8
2,028,206	+		Echvi_1719	0.26	+0.0
2,028,225	-		Echvi_1719	0.39	-0.8
2,028,327	-				+0.4
2,028,327	-				-1.4
2,028,351	-				+0.5
2,028,366	+				+0.1
2,028,379	+				-0.0
2,028,405	-				-0.8
2,028,420	+				-0.2
2,028,421	-				-0.1
2,028,453	-				-0.3
2,028,500	+				+1.4
2,028,500	+				-1.7
2,028,500	+				-2.4
2,028,501	-				-1.4
2,028,501	-				+1.1
2,028,501	-				-1.7
2,028,548	-				+0.2
2,028,573	+				-1.3
2,028,574	-				-0.2
2,028,642	-				-0.2
2,028,714	-				+0.8
2,028,999	+				+0.7
2,029,032	-				+1.1
2,029,101	-				+0.1
2,029,108	+				-0.9
2,029,123	+				+0.6
2,029,123	+				-0.1
2,029,123	+				+0.4
2,029,124	-				+1.4
2,029,126	+				+0.6
2,029,136	+				-0.1
2,029,148	+				-0.7
2,029,148	+				-1.0
2,029,149	-				-0.5
2,029,149	-				+0.2
2,029,191	-		Echvi_1720	0.15	+0.1
2,029,256	-		Echvi_1720	0.26	-1.4
2,029,261	+		Echvi_1720	0.27	-0.2
2,029,262	-		Echvi_1720	0.28	-1.5
2,029,284	-		Echvi_1720	0.31	+1.0
2,029,293	+		Echvi_1720	0.33	+0.7
2,029,294	-		Echvi_1720	0.33	+1.4
2,029,294	-		Echvi_1720	0.33	-1.2
2,029,296	-		Echvi_1720	0.33	-0.3