Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1385

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
1,597,863	-		Echvi_1384	0.20	-0.0
1,597,872	-		Echvi_1384	0.20	+1.7
1,597,885	+		Echvi_1384	0.21	-0.0
1,597,886	-		Echvi_1384	0.21	+0.4
1,597,887	+		Echvi_1384	0.22	-0.4
1,597,887	+		Echvi_1384	0.22	+0.3
1,597,888	-		Echvi_1384	0.22	+1.0
1,597,888	-		Echvi_1384	0.22	+1.1
1,597,916	+		Echvi_1384	0.24	-0.1
1,597,916	+		Echvi_1384	0.24	-0.3
1,598,064	-		Echvi_1384	0.36	-2.2
1,598,066	-		Echvi_1384	0.37	-1.6
1,598,069	+		Echvi_1384	0.37	+0.5
1,598,080	+		Echvi_1384	0.38	+0.3
1,598,246	+		Echvi_1384	0.52	+0.0
1,598,246	+		Echvi_1384	0.52	-2.3
1,598,381	-		Echvi_1384	0.63	+0.9
1,598,468	+		Echvi_1384	0.70	+0.3
1,598,469	-		Echvi_1384	0.70	+0.8
1,598,471	+		Echvi_1384	0.70	-0.9
1,598,471	+		Echvi_1384	0.70	+0.9
1,598,471	+		Echvi_1384	0.70	+0.2
1,598,472	-		Echvi_1384	0.70	+0.4
1,598,475	+		Echvi_1384	0.71	+1.3
1,598,486	+		Echvi_1384	0.72	+1.7
1,598,486	+		Echvi_1384	0.72	+0.7
1,598,486	+		Echvi_1384	0.72	+0.1
1,598,486	+		Echvi_1384	0.72	-1.0
1,598,486	+		Echvi_1384	0.72	-1.0
1,598,486	+		Echvi_1384	0.72	-0.3
1,598,487	-		Echvi_1384	0.72	+1.6
1,598,487	-		Echvi_1384	0.72	-0.1
1,598,487	-		Echvi_1384	0.72	+1.1
1,598,487	-		Echvi_1384	0.72	-0.6
1,598,487	-		Echvi_1384	0.72	-0.5
1,598,557	+		Echvi_1384	0.78	-0.3
1,598,557	+		Echvi_1384	0.78	+0.8
1,598,558	-		Echvi_1384	0.78	+0.7
1,598,624	+		Echvi_1384	0.83	-1.2
1,598,624	+		Echvi_1384	0.83	+0.0
1,598,723	-				-0.4
1,598,774	+				-0.6
1,598,775	-				-0.9
1,598,775	-				-0.1
1,598,776	+				+0.9
1,598,776	+				+0.7
1,598,777	-				-1.2
1,598,777	-				-1.1
1,598,777	-				+1.1
1,598,825	+				-1.5
1,598,826	-				+1.1
1,598,828	+				+0.3
1,598,828	+				+0.4
1,598,829	-				+0.0
1,598,829	-				-0.5
1,598,829	-				-1.8
1,598,889	+		Echvi_1385	0.16	+0.6
1,598,894	-		Echvi_1385	0.17	+0.9
1,598,918	+		Echvi_1385	0.24	+0.7
1,599,010	+		Echvi_1385	0.47	-0.5
1,599,056	-		Echvi_1385	0.59	+1.4
1,599,169	+		Echvi_1385	0.88	+0.9
1,599,169	+		Echvi_1385	0.88	-1.0
1,599,169	+		Echvi_1385	0.88	+1.7
1,599,169	+		Echvi_1385	0.88	+0.8
1,599,213	+				-0.2
1,599,380	+				+0.4
1,599,380	+				+0.5
1,599,504	+		Echvi_1386	0.46	-2.0
1,599,504	+		Echvi_1386	0.46	+0.3
1,599,544	+		Echvi_1386	0.64	-0.5
1,599,573	+		Echvi_1386	0.76	-1.1
1,599,573	+		Echvi_1386	0.76	-0.5
1,599,573	+		Echvi_1386	0.76	+0.7
1,599,714	+				+0.7
1,599,746	-				-0.1
1,599,748	+				+0.1
1,599,749	-				-0.8
1,599,762	+				-1.9
1,599,762	+				-0.8
1,599,766	-				+0.9
1,599,864	-				-1.3
1,599,878	+				+0.0
1,599,879	-				+0.4
1,599,879	-				-0.7
1,599,879	-				+1.1
1,599,879	-				+1.4
1,599,884	+				-0.0
1,599,884	+				-1.6
1,599,885	-				+0.1
1,599,885	-				+0.7
1,599,885	-				-0.2
1,599,912	-				+0.7
1,599,917	-				-0.2
1,599,917	-				-0.8
1,599,920	-				+1.7
1,599,925	-				-0.1
1,599,928	+				-0.3
1,599,929	-				-0.6
1,599,929	-				-1.9
1,599,965	+				-0.7
1,599,966	-				-0.5
1,599,971	+				-0.7
1,599,992	+				-0.9
1,600,037	+		Echvi_1387	0.14	+0.4
1,600,122	+		Echvi_1387	0.23	+0.0
1,600,123	-		Echvi_1387	0.24	+0.5
1,600,124	+		Echvi_1387	0.24	+1.4
1,600,139	+		Echvi_1387	0.25	+0.2
1,600,139	+		Echvi_1387	0.25	-0.5
1,600,140	-		Echvi_1387	0.26	+0.5
1,600,145	+		Echvi_1387	0.26	-0.2
1,600,205	+		Echvi_1387	0.33	+0.1
1,600,205	+		Echvi_1387	0.33	-0.2
1,600,205	+		Echvi_1387	0.33	-1.3
1,600,206	-		Echvi_1387	0.33	-0.3