Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1292

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
1,485,686	+		Echvi_1291	0.71	+0.4
1,485,686	+		Echvi_1291	0.71	-1.0
1,485,687	-		Echvi_1291	0.71	+1.0
1,485,687	-		Echvi_1291	0.71	+0.3
1,485,687	-		Echvi_1291	0.71	-0.3
1,485,696	+		Echvi_1291	0.72	+0.2
1,485,738	-		Echvi_1291	0.73	-1.6
1,485,774	+		Echvi_1291	0.75	+0.1
1,485,847	-		Echvi_1291	0.77	-0.3
1,485,885	+		Echvi_1291	0.79	-2.2
1,485,886	-		Echvi_1291	0.79	-0.0
1,485,915	+		Echvi_1291	0.80	+0.5
1,486,001	+		Echvi_1291	0.83	-0.1
1,486,001	+		Echvi_1291	0.83	-1.6
1,486,002	-		Echvi_1291	0.83	-0.4
1,486,002	-		Echvi_1291	0.83	-0.5
1,486,002	-		Echvi_1291	0.83	+0.0
1,486,002	-		Echvi_1291	0.83	-0.5
1,486,002	-		Echvi_1291	0.83	+1.0
1,486,011	+		Echvi_1291	0.83	-0.0
1,486,011	+		Echvi_1291	0.83	-0.3
1,486,011	+		Echvi_1291	0.83	-0.4
1,486,012	-		Echvi_1291	0.83	-1.1
1,486,012	-		Echvi_1291	0.83	-0.0
1,486,012	-		Echvi_1291	0.83	+1.6
1,486,012	-		Echvi_1291	0.83	+0.1
1,486,026	-		Echvi_1291	0.84	-1.1
1,486,090	+		Echvi_1291	0.86	+0.3
1,486,091	-		Echvi_1291	0.86	+0.1
1,486,153	+		Echvi_1291	0.89	-1.5
1,486,154	-		Echvi_1291	0.89	-1.3
1,486,252	-				+1.7
1,486,252	-				+0.2
1,486,252	-				+0.5
1,486,252	-				-0.4
1,486,273	+				+0.8
1,486,352	+				-1.9
1,486,353	-				-0.1
1,486,391	+				-1.4
1,486,392	-				-1.7
1,486,392	-				-0.8
1,486,392	-				-0.8
1,486,515	+				+0.1
1,486,516	-				+0.3
1,486,516	-				-0.2
1,486,519	-				-0.3
1,486,519	-				+0.2
1,486,521	-				+0.6
1,486,521	-				-0.0
1,486,579	+				+0.4
1,486,580	-				-1.2
1,486,609	+				-0.6
1,486,609	+				-0.5
1,486,618	-				+0.4
1,486,618	-				-0.5
1,486,734	-		Echvi_1292	0.12	-2.7
1,486,751	-		Echvi_1292	0.14	-1.8
1,486,778	-		Echvi_1292	0.18	-2.5
1,486,829	+		Echvi_1292	0.25	-2.0
1,486,829	+		Echvi_1292	0.25	-3.0
1,486,830	-		Echvi_1292	0.26	-0.1
1,486,832	+		Echvi_1292	0.26	-2.2
1,486,833	-		Echvi_1292	0.26	-0.6
1,486,878	+		Echvi_1292	0.32	-4.1
1,486,921	+		Echvi_1292	0.39	-1.2
1,486,922	-		Echvi_1292	0.39	-4.0
1,486,922	-		Echvi_1292	0.39	-2.7
1,486,922	-		Echvi_1292	0.39	+0.1
1,486,926	+		Echvi_1292	0.39	-0.8
1,486,949	-		Echvi_1292	0.43	-2.4
1,487,033	+		Echvi_1292	0.55	-3.9
1,487,034	-		Echvi_1292	0.55	-3.0
1,487,034	-		Echvi_1292	0.55	-3.6
1,487,049	-		Echvi_1292	0.57	-1.1
1,487,050	+		Echvi_1292	0.57	-3.7
1,487,050	+		Echvi_1292	0.57	-2.5
1,487,050	+		Echvi_1292	0.57	-3.6
1,487,051	-		Echvi_1292	0.57	-1.8
1,487,051	-		Echvi_1292	0.57	-2.6
1,487,051	-		Echvi_1292	0.57	-1.1
1,487,109	-		Echvi_1292	0.65	-1.1
1,487,163	-		Echvi_1292	0.73	-0.3
1,487,209	+		Echvi_1292	0.80	-1.0
1,487,210	-		Echvi_1292	0.80	-3.2
1,487,288	-				-1.3
1,487,300	+				-4.4
1,487,301	-				-2.8
1,487,301	-				-1.2
1,487,331	+				-2.2
1,487,331	+				-2.3
1,487,331	+				-2.1
1,487,331	+				-3.0
1,487,331	+				-0.7
1,487,374	+				-2.2
1,487,374	+				+1.1
1,487,374	+				-1.5
1,487,380	+				-3.5
1,487,380	+				-1.1
1,487,405	+				-2.0
1,487,422	+				-3.7
1,487,448	+				-0.7
1,487,448	+				-1.7
1,487,597	+		Echvi_1293	0.15	-2.4
1,487,597	+		Echvi_1293	0.15	-1.8
1,487,609	+		Echvi_1293	0.16	-2.2
1,487,611	+		Echvi_1293	0.16	-3.3
1,487,612	-		Echvi_1293	0.16	+1.3
1,487,698	-		Echvi_1293	0.21	+0.1
1,487,708	+		Echvi_1293	0.21	-2.5
1,487,726	+		Echvi_1293	0.23	-0.8
1,487,861	+		Echvi_1293	0.31	-3.9
1,487,893	+		Echvi_1293	0.32	-1.1
1,487,960	+		Echvi_1293	0.36	-0.1
1,488,016	+		Echvi_1293	0.40	-0.3
1,488,083	+		Echvi_1293	0.44	-1.3
1,488,083	+		Echvi_1293	0.44	-1.8
1,488,212	+		Echvi_1293	0.51	-1.2
1,488,262	+		Echvi_1293	0.54	-2.9
1,488,286	+		Echvi_1293	0.56	-1.0