Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1110

Experiment: m.b. Polymyxin B sulfate 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Polymyxin B sulfate 1 mg/ml
1,272,150	+		Echvi_1108	0.59	-0.8
1,272,150	+		Echvi_1108	0.59	+0.9
1,272,212	-		Echvi_1108	0.65	+1.7
1,272,221	-		Echvi_1108	0.66	+0.7
1,272,225	+		Echvi_1108	0.66	+0.4
1,272,225	+		Echvi_1108	0.66	+1.2
1,272,225	+		Echvi_1108	0.66	+1.0
1,272,226	-		Echvi_1108	0.66	+1.6
1,272,226	-		Echvi_1108	0.66	+2.0
1,272,295	+		Echvi_1108	0.73	+0.1
1,272,295	+		Echvi_1108	0.73	+0.8
1,272,295	+		Echvi_1108	0.73	+1.2
1,272,295	+		Echvi_1108	0.73	+0.9
1,272,295	+		Echvi_1108	0.73	+0.5
1,272,295	+		Echvi_1108	0.73	+1.4
1,272,295	+		Echvi_1108	0.73	+1.2
1,272,296	-		Echvi_1108	0.73	+0.9
1,272,296	-		Echvi_1108	0.73	+1.1
1,272,296	-		Echvi_1108	0.73	+1.0
1,272,296	-		Echvi_1108	0.73	+1.1
1,272,296	-		Echvi_1108	0.73	+1.4
1,272,298	+		Echvi_1108	0.73	+1.1
1,272,299	-		Echvi_1108	0.73	+0.9
1,272,299	-		Echvi_1108	0.73	+1.6
1,272,469	+		Echvi_1108	0.89	+0.4
1,272,469	+		Echvi_1108	0.89	+1.1
1,272,469	+		Echvi_1108	0.89	+0.2
1,272,470	-		Echvi_1108	0.89	+1.1
1,272,470	-		Echvi_1108	0.89	+0.9
1,272,499	+				+1.2
1,272,499	+				+0.8
1,272,499	+				+0.9
1,272,499	+				+0.4
1,272,499	+				+1.5
1,272,499	+				+1.5
1,272,499	+				+1.1
1,272,499	+				+1.1
1,272,500	-				+0.9
1,272,500	-				+0.7
1,272,500	-				+1.0
1,272,500	-				+0.6
1,272,500	-				+1.0
1,272,500	-				+0.7
1,272,500	-				+1.0
1,272,500	-				+1.7
1,272,502	-				+1.1
1,272,608	+				+0.1
1,272,720	+		Echvi_1109	0.21	-0.5
1,272,819	+		Echvi_1109	0.40	+1.3
1,272,820	-		Echvi_1109	0.40	+0.7
1,272,868	-		Echvi_1109	0.49	-0.3
1,272,873	+		Echvi_1109	0.50	-0.2
1,273,060	-		Echvi_1109	0.84	+1.0
1,273,160	+				-2.5
1,273,160	+				-1.4
1,273,161	-				+0.1
1,273,174	-				+1.5
1,273,174	-				+0.3
1,273,221	-		Echvi_1110	0.15	-2.0
1,273,221	-		Echvi_1110	0.15	+0.3
1,273,221	-		Echvi_1110	0.15	-0.2
1,273,237	+		Echvi_1110	0.18	+0.8
1,273,243	+		Echvi_1110	0.19	-1.2
1,273,315	+		Echvi_1110	0.30	+1.6
1,273,316	-		Echvi_1110	0.30	-1.5
1,273,316	-		Echvi_1110	0.30	-0.7
1,273,376	+		Echvi_1110	0.40	-0.4
1,273,376	+		Echvi_1110	0.40	-1.0
1,273,378	+		Echvi_1110	0.40	-1.0
1,273,397	-		Echvi_1110	0.43	+0.4
1,273,408	+		Echvi_1110	0.45	+1.2
1,273,409	-		Echvi_1110	0.45	+0.5
1,273,422	+		Echvi_1110	0.47	+0.7
1,273,423	-		Echvi_1110	0.48	-0.9
1,273,423	-		Echvi_1110	0.48	+0.2
1,273,491	-		Echvi_1110	0.58	-1.4
1,273,491	-		Echvi_1110	0.58	-1.3
1,273,507	+		Echvi_1110	0.61	-1.1
1,273,507	+		Echvi_1110	0.61	-0.7
1,273,507	+		Echvi_1110	0.61	+1.3
1,273,508	-		Echvi_1110	0.61	+0.1
1,273,535	-		Echvi_1110	0.66	+0.5
1,273,535	-		Echvi_1110	0.66	-0.1
1,273,561	+		Echvi_1110	0.70	+1.8
1,273,591	+		Echvi_1110	0.75	+0.0
1,273,591	+		Echvi_1110	0.75	-1.3
1,273,592	-		Echvi_1110	0.75	+0.7
1,273,592	-		Echvi_1110	0.75	+1.3
1,273,592	-		Echvi_1110	0.75	-0.2
1,273,689	+				+0.3
1,273,689	+				-0.1
1,273,829	+				+1.4
1,273,830	-				-2.0
1,273,836	-				+0.5
1,273,865	+				+2.1
1,273,866	-				+1.1
1,273,866	-				-0.8
1,273,877	+				-1.4
1,273,878	-				-0.2
1,273,881	+				-0.2
1,273,882	-				+0.5
1,273,882	-				-0.9
1,273,931	-				+0.1
1,273,941	-				+0.0
1,273,950	-				-0.4
1,273,978	-				-1.9
1,273,978	-				+1.2
1,273,980	-				+0.3
1,273,980	-				+0.3
1,273,980	-				+0.7
1,273,985	-				-0.3
1,274,133	+				-1.1
1,274,162	+				-0.2
1,274,162	+				+0.1
1,274,163	-				+0.4
1,274,163	-				+0.3
1,274,163	-				+0.1
1,274,163	-				+1.5
1,274,227	+				+1.0
1,274,228	-				-1.0
1,274,253	+				+0.2
1,274,253	+				+0.1
1,274,254	-				-0.7
1,274,254	-				-0.9
1,274,254	-				-0.9
1,274,254	-				+0.2
1,274,357	-				-0.3
1,274,359	+				+0.1
1,274,359	+				+0.6
1,274,360	-				-0.8
1,274,360	-				-0.8
1,274,360	-				+0.1
1,274,365	-				-0.0
1,274,365	-				-1.5
1,274,388	+				+0.7
1,274,389	-				+0.6