Experiment: m.b. Polymyxin B sulfate 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0653 and Echvi_0654 are separated by 5 nucleotides Echvi_0654 and Echvi_0655 are separated by 82 nucleotides Echvi_0655 and Echvi_0656 are separated by 74 nucleotides Echvi_0656 and Echvi_0657 are separated by 10 nucleotides
Echvi_0653: Echvi_0653 - Outer membrane protein/protective antigen OMA87, at 736,440 to 739,154
_0653
Echvi_0654: Echvi_0654 - undecaprenyl diphosphate synthase, at 739,160 to 739,897
_0654
Echvi_0655: Echvi_0655 - hypothetical protein, at 739,980 to 740,771
_0655
Echvi_0656: Echvi_0656 - Predicted sugar kinase, at 740,846 to 741,721
_0656
Echvi_0657: Echvi_0657 - hypothetical protein, at 741,732 to 742,397
_0657
Position (kb) 739
740
741 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 739.932 kb on - strand at 739.978 kb on - strand at 740.041 kb on + strand at 740.068 kb on + strand, within Echvi_0655 at 740.092 kb on + strand, within Echvi_0655 at 740.093 kb on - strand, within Echvi_0655 at 740.211 kb on + strand, within Echvi_0655 at 740.242 kb on + strand, within Echvi_0655 at 740.243 kb on - strand, within Echvi_0655 at 740.243 kb on - strand, within Echvi_0655 at 740.287 kb on + strand, within Echvi_0655 at 740.353 kb on + strand, within Echvi_0655 at 740.354 kb on - strand, within Echvi_0655 at 740.383 kb on + strand, within Echvi_0655 at 740.411 kb on - strand, within Echvi_0655 at 740.425 kb on + strand, within Echvi_0655 at 740.490 kb on - strand, within Echvi_0655 at 740.505 kb on + strand, within Echvi_0655 at 740.505 kb on + strand, within Echvi_0655 at 740.505 kb on + strand, within Echvi_0655 at 740.505 kb on + strand, within Echvi_0655 at 740.505 kb on + strand, within Echvi_0655 at 740.505 kb on + strand, within Echvi_0655 at 740.506 kb on - strand, within Echvi_0655 at 740.506 kb on - strand, within Echvi_0655 at 740.545 kb on + strand, within Echvi_0655 at 740.546 kb on - strand, within Echvi_0655 at 740.630 kb on + strand, within Echvi_0655 at 740.631 kb on - strand, within Echvi_0655 at 740.631 kb on - strand, within Echvi_0655 at 740.633 kb on + strand, within Echvi_0655 at 740.634 kb on - strand, within Echvi_0655 at 740.634 kb on - strand, within Echvi_0655 at 740.664 kb on + strand, within Echvi_0655 at 740.665 kb on - strand, within Echvi_0655 at 740.665 kb on - strand, within Echvi_0655 at 740.665 kb on - strand, within Echvi_0655 at 740.718 kb on + strand at 740.786 kb on + strand at 740.820 kb on - strand at 740.836 kb on + strand at 740.837 kb on - strand at 741.733 kb on + strand at 741.733 kb on + strand at 741.734 kb on - strand at 741.738 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 1 mg/ml remove 739,932 - -0.9 739,978 - +1.3 740,041 + -2.1 740,068 + Echvi_0655 0.11 -2.7 740,092 + Echvi_0655 0.14 -3.2 740,093 - Echvi_0655 0.14 -1.3 740,211 + Echvi_0655 0.29 -5.2 740,242 + Echvi_0655 0.33 -2.9 740,243 - Echvi_0655 0.33 -1.4 740,243 - Echvi_0655 0.33 +0.1 740,287 + Echvi_0655 0.39 -2.8 740,353 + Echvi_0655 0.47 -4.6 740,354 - Echvi_0655 0.47 +0.6 740,383 + Echvi_0655 0.51 -3.2 740,411 - Echvi_0655 0.54 -2.3 740,425 + Echvi_0655 0.56 -6.0 740,490 - Echvi_0655 0.64 -0.4 740,505 + Echvi_0655 0.66 -1.7 740,505 + Echvi_0655 0.66 -5.0 740,505 + Echvi_0655 0.66 -1.6 740,505 + Echvi_0655 0.66 -2.0 740,505 + Echvi_0655 0.66 -3.4 740,505 + Echvi_0655 0.66 -3.8 740,506 - Echvi_0655 0.66 -1.3 740,506 - Echvi_0655 0.66 -1.1 740,545 + Echvi_0655 0.71 -2.9 740,546 - Echvi_0655 0.71 -2.4 740,630 + Echvi_0655 0.82 -3.7 740,631 - Echvi_0655 0.82 -2.3 740,631 - Echvi_0655 0.82 -1.5 740,633 + Echvi_0655 0.82 -1.7 740,634 - Echvi_0655 0.83 -1.5 740,634 - Echvi_0655 0.83 -1.9 740,664 + Echvi_0655 0.86 -5.8 740,665 - Echvi_0655 0.86 -1.2 740,665 - Echvi_0655 0.86 -1.6 740,665 - Echvi_0655 0.86 -0.8 740,718 + -2.1 740,786 + -2.8 740,820 - -2.3 740,836 + -1.8 740,837 - +0.4 741,733 + +0.1 741,733 + +0.0 741,734 - +0.3 741,738 - -1.1
Or see this region's nucleotide sequence