Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4126 and EX28DRAFT_4127 are separated by 67 nucleotides EX28DRAFT_4127 and EX28DRAFT_4128 are separated by 385 nucleotides
EX28DRAFT_4126: EX28DRAFT_4126 - 4-alpha-glucanotransferase, at 105,063 to 107,141
_4126
EX28DRAFT_4127: EX28DRAFT_4127 - gluconate transporter, at 107,209 to 108,525
_4127
EX28DRAFT_4128: EX28DRAFT_4128 - IscR-regulated protein YhgI, at 108,911 to 109,486
_4128
Position (kb)
107
108
109 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 106.467 kb on + strand, within EX28DRAFT_4126 at 106.518 kb on - strand, within EX28DRAFT_4126 at 106.518 kb on - strand, within EX28DRAFT_4126 at 106.602 kb on + strand, within EX28DRAFT_4126 at 106.602 kb on + strand, within EX28DRAFT_4126 at 106.608 kb on + strand, within EX28DRAFT_4126 at 106.609 kb on - strand, within EX28DRAFT_4126 at 106.610 kb on + strand, within EX28DRAFT_4126 at 106.611 kb on - strand, within EX28DRAFT_4126 at 106.611 kb on - strand, within EX28DRAFT_4126 at 106.722 kb on + strand, within EX28DRAFT_4126 at 106.797 kb on + strand, within EX28DRAFT_4126 at 106.877 kb on + strand, within EX28DRAFT_4126 at 106.930 kb on - strand, within EX28DRAFT_4126 at 107.019 kb on + strand at 107.019 kb on + strand at 107.025 kb on + strand at 107.026 kb on - strand at 107.026 kb on - strand at 107.099 kb on + strand at 107.107 kb on + strand at 107.170 kb on + strand at 107.206 kb on - strand at 107.221 kb on - strand at 107.316 kb on - strand at 107.404 kb on + strand, within EX28DRAFT_4127 at 107.499 kb on + strand, within EX28DRAFT_4127 at 107.499 kb on + strand, within EX28DRAFT_4127 at 107.500 kb on - strand, within EX28DRAFT_4127 at 107.555 kb on + strand, within EX28DRAFT_4127 at 107.556 kb on - strand, within EX28DRAFT_4127 at 107.556 kb on - strand, within EX28DRAFT_4127 at 107.556 kb on - strand, within EX28DRAFT_4127 at 107.556 kb on - strand, within EX28DRAFT_4127 at 107.655 kb on + strand, within EX28DRAFT_4127 at 107.901 kb on - strand, within EX28DRAFT_4127 at 108.009 kb on + strand, within EX28DRAFT_4127 at 108.009 kb on + strand, within EX28DRAFT_4127 at 108.113 kb on + strand, within EX28DRAFT_4127 at 108.113 kb on + strand, within EX28DRAFT_4127 at 108.114 kb on - strand, within EX28DRAFT_4127 at 108.277 kb on - strand, within EX28DRAFT_4127 at 108.490 kb on + strand at 108.490 kb on + strand at 108.490 kb on + strand at 108.491 kb on - strand at 108.491 kb on - strand at 108.491 kb on - strand at 108.531 kb on - strand at 108.759 kb on + strand at 108.761 kb on + strand at 108.762 kb on - strand at 108.762 kb on - strand at 108.817 kb on + strand at 108.912 kb on + strand at 108.913 kb on - strand at 108.916 kb on - strand at 108.919 kb on - strand at 108.919 kb on - strand at 109.360 kb on - strand, within EX28DRAFT_4128 at 109.478 kb on - strand at 109.487 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 106,467 + EX28DRAFT_4126 0.68 +0.4 106,518 - EX28DRAFT_4126 0.70 +0.8 106,518 - EX28DRAFT_4126 0.70 +0.0 106,602 + EX28DRAFT_4126 0.74 -0.4 106,602 + EX28DRAFT_4126 0.74 +1.9 106,608 + EX28DRAFT_4126 0.74 -0.5 106,609 - EX28DRAFT_4126 0.74 +0.9 106,610 + EX28DRAFT_4126 0.74 +0.3 106,611 - EX28DRAFT_4126 0.74 +0.2 106,611 - EX28DRAFT_4126 0.74 -0.0 106,722 + EX28DRAFT_4126 0.80 +0.4 106,797 + EX28DRAFT_4126 0.83 +0.0 106,877 + EX28DRAFT_4126 0.87 -3.0 106,930 - EX28DRAFT_4126 0.90 +0.7 107,019 + +0.5 107,019 + +1.0 107,025 + -0.9 107,026 - -1.8 107,026 - -2.0 107,099 + -0.3 107,107 + -0.9 107,170 + +1.2 107,206 - -0.6 107,221 - -0.5 107,316 - +0.6 107,404 + EX28DRAFT_4127 0.15 +0.8 107,499 + EX28DRAFT_4127 0.22 -0.3 107,499 + EX28DRAFT_4127 0.22 +0.5 107,500 - EX28DRAFT_4127 0.22 +0.1 107,555 + EX28DRAFT_4127 0.26 -1.1 107,556 - EX28DRAFT_4127 0.26 -0.3 107,556 - EX28DRAFT_4127 0.26 -0.2 107,556 - EX28DRAFT_4127 0.26 +0.1 107,556 - EX28DRAFT_4127 0.26 -1.2 107,655 + EX28DRAFT_4127 0.34 -0.8 107,901 - EX28DRAFT_4127 0.53 -0.0 108,009 + EX28DRAFT_4127 0.61 -0.5 108,009 + EX28DRAFT_4127 0.61 -0.1 108,113 + EX28DRAFT_4127 0.69 -0.5 108,113 + EX28DRAFT_4127 0.69 +0.1 108,114 - EX28DRAFT_4127 0.69 -0.1 108,277 - EX28DRAFT_4127 0.81 +0.0 108,490 + -1.8 108,490 + -0.6 108,490 + -1.3 108,491 - +0.2 108,491 - -0.8 108,491 - +0.2 108,531 - -0.2 108,759 + +0.9 108,761 + -0.4 108,762 - +0.2 108,762 - +0.1 108,817 + +0.5 108,912 + +0.3 108,913 - +0.4 108,916 - +0.1 108,919 - +0.5 108,919 - +0.2 109,360 - EX28DRAFT_4128 0.78 -1.9 109,478 - -1.5 109,487 - +0.6
Or see this region's nucleotide sequence