Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2787 and EX28DRAFT_2788 are separated by 35 nucleotides EX28DRAFT_2788 and EX28DRAFT_2789 overlap by 4 nucleotides EX28DRAFT_2789 and EX28DRAFT_2790 are separated by 269 nucleotides
EX28DRAFT_2787: EX28DRAFT_2787 - ABC-type metal ion transport system, periplasmic component/surface adhesin, at 91,025 to 91,882
_2787
EX28DRAFT_2788: EX28DRAFT_2788 - ABC-type Mn2+/Zn2+ transport systems, permease components, at 91,918 to 92,778
_2788
EX28DRAFT_2789: EX28DRAFT_2789 - ABC-type Mn/Zn transport systems, ATPase component, at 92,775 to 93,428
_2789
EX28DRAFT_2790: EX28DRAFT_2790 - lytic murein transglycosylase B, at 93,698 to 94,798
_2790
Position (kb) 92
93
94 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 91.895 kb on - strand at 91.977 kb on + strand at 91.978 kb on - strand at 91.978 kb on - strand at 92.104 kb on + strand, within EX28DRAFT_2788 at 92.334 kb on + strand, within EX28DRAFT_2788 at 92.335 kb on - strand, within EX28DRAFT_2788 at 92.335 kb on - strand, within EX28DRAFT_2788 at 92.335 kb on - strand, within EX28DRAFT_2788 at 92.335 kb on - strand, within EX28DRAFT_2788 at 92.335 kb on - strand, within EX28DRAFT_2788 at 92.465 kb on + strand, within EX28DRAFT_2788 at 92.539 kb on - strand, within EX28DRAFT_2788 at 92.583 kb on + strand, within EX28DRAFT_2788 at 92.598 kb on - strand, within EX28DRAFT_2788 at 92.734 kb on - strand at 92.900 kb on + strand, within EX28DRAFT_2789 at 92.900 kb on + strand, within EX28DRAFT_2789 at 92.901 kb on - strand, within EX28DRAFT_2789 at 92.901 kb on - strand, within EX28DRAFT_2789 at 92.901 kb on - strand, within EX28DRAFT_2789 at 92.902 kb on + strand, within EX28DRAFT_2789 at 92.902 kb on + strand, within EX28DRAFT_2789 at 92.902 kb on + strand, within EX28DRAFT_2789 at 92.902 kb on + strand, within EX28DRAFT_2789 at 92.902 kb on + strand, within EX28DRAFT_2789 at 92.902 kb on + strand, within EX28DRAFT_2789 at 92.902 kb on + strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.903 kb on - strand, within EX28DRAFT_2789 at 92.957 kb on + strand, within EX28DRAFT_2789 at 93.165 kb on + strand, within EX28DRAFT_2789 at 93.166 kb on - strand, within EX28DRAFT_2789 at 93.166 kb on - strand, within EX28DRAFT_2789 at 93.168 kb on + strand, within EX28DRAFT_2789 at 93.169 kb on - strand, within EX28DRAFT_2789 at 93.169 kb on - strand, within EX28DRAFT_2789 at 93.169 kb on - strand, within EX28DRAFT_2789 at 93.169 kb on - strand, within EX28DRAFT_2789 at 93.169 kb on - strand, within EX28DRAFT_2789 at 93.177 kb on + strand, within EX28DRAFT_2789 at 93.178 kb on - strand, within EX28DRAFT_2789 at 93.279 kb on - strand, within EX28DRAFT_2789 at 93.298 kb on - strand, within EX28DRAFT_2789 at 93.380 kb on + strand at 93.555 kb on + strand at 93.555 kb on + strand at 93.560 kb on + strand at 93.561 kb on - strand at 93.561 kb on - strand at 93.587 kb on + strand at 93.588 kb on - strand at 93.588 kb on - strand at 93.636 kb on + strand at 93.637 kb on - strand at 93.689 kb on + strand at 93.690 kb on - strand at 93.790 kb on + strand at 93.791 kb on - strand at 93.831 kb on + strand, within EX28DRAFT_2790 at 93.936 kb on + strand, within EX28DRAFT_2790 at 93.937 kb on - strand, within EX28DRAFT_2790 at 94.029 kb on + strand, within EX28DRAFT_2790 at 94.076 kb on - strand, within EX28DRAFT_2790 at 94.105 kb on - strand, within EX28DRAFT_2790 at 94.111 kb on + strand, within EX28DRAFT_2790 at 94.111 kb on + strand, within EX28DRAFT_2790 at 94.112 kb on - strand, within EX28DRAFT_2790 at 94.113 kb on + strand, within EX28DRAFT_2790 at 94.233 kb on + strand, within EX28DRAFT_2790 at 94.234 kb on - strand, within EX28DRAFT_2790 at 94.234 kb on - strand, within EX28DRAFT_2790 at 94.234 kb on - strand, within EX28DRAFT_2790 at 94.251 kb on + strand, within EX28DRAFT_2790 at 94.252 kb on - strand, within EX28DRAFT_2790 at 94.255 kb on + strand, within EX28DRAFT_2790
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 91,895 - +0.9 91,977 + +1.8 91,978 - -0.6 91,978 - -0.1 92,104 + EX28DRAFT_2788 0.22 +0.3 92,334 + EX28DRAFT_2788 0.48 -0.4 92,335 - EX28DRAFT_2788 0.48 +1.5 92,335 - EX28DRAFT_2788 0.48 +0.8 92,335 - EX28DRAFT_2788 0.48 +0.3 92,335 - EX28DRAFT_2788 0.48 +1.7 92,335 - EX28DRAFT_2788 0.48 +1.2 92,465 + EX28DRAFT_2788 0.64 -0.6 92,539 - EX28DRAFT_2788 0.72 +1.9 92,583 + EX28DRAFT_2788 0.77 +0.1 92,598 - EX28DRAFT_2788 0.79 -0.1 92,734 - +0.2 92,900 + EX28DRAFT_2789 0.19 -0.4 92,900 + EX28DRAFT_2789 0.19 +0.2 92,901 - EX28DRAFT_2789 0.19 +0.4 92,901 - EX28DRAFT_2789 0.19 +1.1 92,901 - EX28DRAFT_2789 0.19 +0.2 92,902 + EX28DRAFT_2789 0.19 +1.7 92,902 + EX28DRAFT_2789 0.19 -1.8 92,902 + EX28DRAFT_2789 0.19 +1.1 92,902 + EX28DRAFT_2789 0.19 -1.2 92,902 + EX28DRAFT_2789 0.19 +0.1 92,902 + EX28DRAFT_2789 0.19 +0.0 92,902 + EX28DRAFT_2789 0.19 -0.1 92,903 - EX28DRAFT_2789 0.20 -0.2 92,903 - EX28DRAFT_2789 0.20 +0.2 92,903 - EX28DRAFT_2789 0.20 +0.4 92,903 - EX28DRAFT_2789 0.20 +0.3 92,903 - EX28DRAFT_2789 0.20 -1.2 92,903 - EX28DRAFT_2789 0.20 -0.1 92,903 - EX28DRAFT_2789 0.20 +0.6 92,903 - EX28DRAFT_2789 0.20 +0.5 92,903 - EX28DRAFT_2789 0.20 -0.4 92,903 - EX28DRAFT_2789 0.20 +0.1 92,903 - EX28DRAFT_2789 0.20 +0.4 92,903 - EX28DRAFT_2789 0.20 +0.2 92,903 - EX28DRAFT_2789 0.20 +0.3 92,903 - EX28DRAFT_2789 0.20 -0.5 92,903 - EX28DRAFT_2789 0.20 -0.0 92,903 - EX28DRAFT_2789 0.20 +0.9 92,957 + EX28DRAFT_2789 0.28 -2.2 93,165 + EX28DRAFT_2789 0.60 +0.6 93,166 - EX28DRAFT_2789 0.60 +0.3 93,166 - EX28DRAFT_2789 0.60 -0.7 93,168 + EX28DRAFT_2789 0.60 +0.0 93,169 - EX28DRAFT_2789 0.60 -1.7 93,169 - EX28DRAFT_2789 0.60 +0.9 93,169 - EX28DRAFT_2789 0.60 -0.9 93,169 - EX28DRAFT_2789 0.60 +0.6 93,169 - EX28DRAFT_2789 0.60 +0.3 93,177 + EX28DRAFT_2789 0.61 +0.2 93,178 - EX28DRAFT_2789 0.62 +1.3 93,279 - EX28DRAFT_2789 0.77 +0.5 93,298 - EX28DRAFT_2789 0.80 -0.1 93,380 + -1.3 93,555 + -2.5 93,555 + +0.4 93,560 + +0.5 93,561 - -2.8 93,561 - +0.6 93,587 + +0.5 93,588 - +1.8 93,588 - -1.4 93,636 + +0.8 93,637 - -0.2 93,689 + -1.3 93,690 - -1.2 93,790 + -0.1 93,791 - +0.3 93,831 + EX28DRAFT_2790 0.12 -0.7 93,936 + EX28DRAFT_2790 0.22 -0.2 93,937 - EX28DRAFT_2790 0.22 -0.4 94,029 + EX28DRAFT_2790 0.30 -0.1 94,076 - EX28DRAFT_2790 0.34 +1.2 94,105 - EX28DRAFT_2790 0.37 +0.1 94,111 + EX28DRAFT_2790 0.38 +0.4 94,111 + EX28DRAFT_2790 0.38 +0.1 94,112 - EX28DRAFT_2790 0.38 -1.7 94,113 + EX28DRAFT_2790 0.38 -0.2 94,233 + EX28DRAFT_2790 0.49 +0.4 94,234 - EX28DRAFT_2790 0.49 +1.6 94,234 - EX28DRAFT_2790 0.49 -1.0 94,234 - EX28DRAFT_2790 0.49 -0.1 94,251 + EX28DRAFT_2790 0.50 +0.2 94,252 - EX28DRAFT_2790 0.50 -1.8 94,255 + EX28DRAFT_2790 0.51 -0.2
Or see this region's nucleotide sequence