Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0782 and EX28DRAFT_0783 overlap by 8 nucleotides EX28DRAFT_0783 and EX28DRAFT_0784 overlap by 22 nucleotides EX28DRAFT_0784 and EX28DRAFT_0785 are separated by 22 nucleotides
EX28DRAFT_0782: EX28DRAFT_0782 - Fatty acid desaturase, at 779,959 to 781,011
_0782
EX28DRAFT_0783: EX28DRAFT_0783 - ABC-type phosphate/phosphonate transport system, periplasmic component, at 781,004 to 781,762
_0783
EX28DRAFT_0784: EX28DRAFT_0784 - Transcriptional regulator, at 781,741 to 782,637
_0784
EX28DRAFT_0785: EX28DRAFT_0785 - oxidoreductase alpha (molybdopterin) subunit, at 782,660 to 784,948
_0785
Position (kb) 781
782 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 780.012 kb on + strand at 780.013 kb on - strand at 780.013 kb on - strand at 780.147 kb on + strand, within EX28DRAFT_0782 at 780.153 kb on + strand, within EX28DRAFT_0782 at 780.153 kb on + strand, within EX28DRAFT_0782 at 780.157 kb on + strand, within EX28DRAFT_0782 at 780.157 kb on + strand, within EX28DRAFT_0782 at 780.157 kb on + strand, within EX28DRAFT_0782 at 780.157 kb on + strand, within EX28DRAFT_0782 at 780.158 kb on - strand, within EX28DRAFT_0782 at 780.158 kb on - strand, within EX28DRAFT_0782 at 780.244 kb on + strand, within EX28DRAFT_0782 at 780.245 kb on - strand, within EX28DRAFT_0782 at 780.245 kb on - strand, within EX28DRAFT_0782 at 780.245 kb on - strand, within EX28DRAFT_0782 at 780.425 kb on - strand, within EX28DRAFT_0782 at 780.425 kb on - strand, within EX28DRAFT_0782 at 780.425 kb on - strand, within EX28DRAFT_0782 at 780.765 kb on + strand, within EX28DRAFT_0782 at 780.811 kb on + strand, within EX28DRAFT_0782 at 780.811 kb on + strand, within EX28DRAFT_0782 at 780.812 kb on - strand, within EX28DRAFT_0782 at 780.812 kb on - strand, within EX28DRAFT_0782 at 780.868 kb on + strand, within EX28DRAFT_0782 at 780.932 kb on + strand at 781.031 kb on + strand at 781.032 kb on - strand at 781.032 kb on - strand at 781.032 kb on - strand at 781.032 kb on - strand at 781.242 kb on - strand, within EX28DRAFT_0783 at 781.242 kb on - strand, within EX28DRAFT_0783 at 781.348 kb on + strand, within EX28DRAFT_0783 at 781.349 kb on - strand, within EX28DRAFT_0783 at 781.763 kb on + strand at 781.763 kb on + strand at 781.764 kb on - strand at 781.764 kb on - strand at 781.764 kb on - strand at 781.764 kb on - strand at 782.013 kb on + strand, within EX28DRAFT_0784 at 782.201 kb on + strand, within EX28DRAFT_0784 at 782.276 kb on + strand, within EX28DRAFT_0784 at 782.276 kb on + strand, within EX28DRAFT_0784 at 782.360 kb on - strand, within EX28DRAFT_0784 at 782.628 kb on + strand at 782.632 kb on - strand at 782.641 kb on + strand at 782.662 kb on - strand at 782.715 kb on + strand at 782.745 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 780,012 + -0.3 780,013 - -0.2 780,013 - +0.0 780,147 + EX28DRAFT_0782 0.18 -0.3 780,153 + EX28DRAFT_0782 0.18 -2.4 780,153 + EX28DRAFT_0782 0.18 +0.2 780,157 + EX28DRAFT_0782 0.19 +0.2 780,157 + EX28DRAFT_0782 0.19 +0.4 780,157 + EX28DRAFT_0782 0.19 +0.7 780,157 + EX28DRAFT_0782 0.19 +0.1 780,158 - EX28DRAFT_0782 0.19 -3.4 780,158 - EX28DRAFT_0782 0.19 -0.4 780,244 + EX28DRAFT_0782 0.27 -2.3 780,245 - EX28DRAFT_0782 0.27 +0.0 780,245 - EX28DRAFT_0782 0.27 -1.2 780,245 - EX28DRAFT_0782 0.27 -4.0 780,425 - EX28DRAFT_0782 0.44 +0.4 780,425 - EX28DRAFT_0782 0.44 -0.2 780,425 - EX28DRAFT_0782 0.44 +2.1 780,765 + EX28DRAFT_0782 0.77 +0.8 780,811 + EX28DRAFT_0782 0.81 +0.3 780,811 + EX28DRAFT_0782 0.81 +0.5 780,812 - EX28DRAFT_0782 0.81 +0.5 780,812 - EX28DRAFT_0782 0.81 -1.2 780,868 + EX28DRAFT_0782 0.86 +2.4 780,932 + +0.5 781,031 + +0.4 781,032 - +0.1 781,032 - +0.5 781,032 - +0.9 781,032 - -0.6 781,242 - EX28DRAFT_0783 0.31 -2.0 781,242 - EX28DRAFT_0783 0.31 -3.2 781,348 + EX28DRAFT_0783 0.45 +0.2 781,349 - EX28DRAFT_0783 0.45 -0.5 781,763 + +0.2 781,763 + +1.1 781,764 - -0.2 781,764 - +0.8 781,764 - -0.1 781,764 - -0.8 782,013 + EX28DRAFT_0784 0.30 +0.1 782,201 + EX28DRAFT_0784 0.51 -0.2 782,276 + EX28DRAFT_0784 0.60 +1.9 782,276 + EX28DRAFT_0784 0.60 +0.5 782,360 - EX28DRAFT_0784 0.69 +0.5 782,628 + +0.4 782,632 - -0.8 782,641 + -0.5 782,662 - +0.5 782,715 + +0.7 782,745 + -1.1
Or see this region's nucleotide sequence