Strain Fitness in Bosea sp. OAE506 around ABIE41_RS08705

Experiment: D-Mannitol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS08700 and ABIE41_RS08705 are separated by 48 nucleotidesABIE41_RS08705 and ABIE41_RS08710 are separated by 308 nucleotides ABIE41_RS08700: ABIE41_RS08700 - bifunctional diguanylate cyclase/phosphodiesterase, at 1,801,166 to 1,802,860 _RS08700 ABIE41_RS08705: ABIE41_RS08705 - polyhydroxyalkanoate synthesis repressor PhaR, at 1,802,909 to 1,803,505 _RS08705 ABIE41_RS08710: ABIE41_RS08710 - acetyl-CoA C-acetyltransferase, at 1,803,814 to 1,804,992 _RS08710 Position (kb) 1802 1803 1804Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1802.669 kb on + strand, within ABIE41_RS08700at 1802.669 kb on + strand, within ABIE41_RS08700at 1802.669 kb on + strand, within ABIE41_RS08700at 1802.669 kb on + strand, within ABIE41_RS08700at 1802.669 kb on + strand, within ABIE41_RS08700at 1802.670 kb on - strand, within ABIE41_RS08700at 1802.777 kb on + strandat 1802.777 kb on + strandat 1802.777 kb on + strandat 1802.777 kb on + strandat 1802.777 kb on + strandat 1802.778 kb on - strandat 1802.778 kb on - strandat 1802.778 kb on - strandat 1803.372 kb on + strand, within ABIE41_RS08705at 1803.372 kb on + strand, within ABIE41_RS08705at 1803.372 kb on + strand, within ABIE41_RS08705at 1803.429 kb on + strand, within ABIE41_RS08705at 1803.429 kb on + strand, within ABIE41_RS08705at 1803.451 kb on - strandat 1803.469 kb on - strandat 1804.280 kb on - strand, within ABIE41_RS08710

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Mannitol (C)
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1,802,669 + ABIE41_RS08700 0.89 -1.6
1,802,669 + ABIE41_RS08700 0.89 -0.0
1,802,669 + ABIE41_RS08700 0.89 +0.2
1,802,669 + ABIE41_RS08700 0.89 +0.2
1,802,669 + ABIE41_RS08700 0.89 +0.2
1,802,670 - ABIE41_RS08700 0.89 +0.0
1,802,777 + +0.1
1,802,777 + +1.6
1,802,777 + +1.5
1,802,777 + +1.0
1,802,777 + -0.9
1,802,778 - +0.5
1,802,778 - +0.6
1,802,778 - -0.9
1,803,372 + ABIE41_RS08705 0.78 -2.1
1,803,372 + ABIE41_RS08705 0.78 -3.5
1,803,372 + ABIE41_RS08705 0.78 -0.3
1,803,429 + ABIE41_RS08705 0.87 +0.0
1,803,429 + ABIE41_RS08705 0.87 +2.0
1,803,451 - +1.4
1,803,469 - -1.2
1,804,280 - ABIE41_RS08710 0.40 +0.9

Or see this region's nucleotide sequence