Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS18775

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
3,753,030	+		ABIE40_RS18765	0.81	-1.1
3,753,030	+		ABIE40_RS18765	0.81	-0.9
3,753,030	+		ABIE40_RS18765	0.81	-2.0
3,753,030	+		ABIE40_RS18765	0.81	-0.1
3,753,030	+		ABIE40_RS18765	0.81	+0.7
3,753,030	+		ABIE40_RS18765	0.81	-0.5
3,753,030	+		ABIE40_RS18765	0.81	+0.9
3,753,030	-		ABIE40_RS18765	0.81	-2.2
3,753,031	-		ABIE40_RS18765	0.81	-0.6
3,753,031	-		ABIE40_RS18765	0.81	-0.3
3,753,031	-		ABIE40_RS18765	0.81	+0.1
3,753,031	-		ABIE40_RS18765	0.81	+2.5
3,753,031	-		ABIE40_RS18765	0.81	-0.3
3,753,031	-		ABIE40_RS18765	0.81	-1.8
3,753,031	-		ABIE40_RS18765	0.81	-0.9
3,753,048	+		ABIE40_RS18765	0.83	-1.8
3,753,048	+		ABIE40_RS18765	0.83	+0.0
3,753,048	+		ABIE40_RS18765	0.83	-0.8
3,753,048	+		ABIE40_RS18765	0.83	-0.7
3,753,048	+		ABIE40_RS18765	0.83	-1.7
3,753,048	+		ABIE40_RS18765	0.83	-0.9
3,753,049	-		ABIE40_RS18765	0.83	+3.4
3,753,049	-		ABIE40_RS18765	0.83	-1.0
3,753,049	-		ABIE40_RS18765	0.83	-3.4
3,753,049	-		ABIE40_RS18765	0.83	+0.6
3,753,049	-		ABIE40_RS18765	0.83	+0.8
3,753,049	-		ABIE40_RS18765	0.83	-2.5
3,753,069	+		ABIE40_RS18765	0.86	-3.7
3,753,069	+		ABIE40_RS18765	0.86	+1.3
3,753,069	+		ABIE40_RS18765	0.86	-2.3
3,753,069	+		ABIE40_RS18765	0.86	+0.1
3,753,069	+		ABIE40_RS18765	0.86	-0.4
3,753,069	+		ABIE40_RS18765	0.86	-1.1
3,753,070	-		ABIE40_RS18765	0.86	+0.1
3,753,070	-		ABIE40_RS18765	0.86	-1.1
3,753,070	-		ABIE40_RS18765	0.86	+2.2
3,753,736	+		ABIE40_RS18770	0.76	-0.8
3,753,737	-		ABIE40_RS18770	0.76	-2.4
3,753,737	-		ABIE40_RS18770	0.76	-0.8
3,753,908	+				-0.2
3,753,908	+				-1.2
3,753,908	+				+0.3
3,753,908	+				-2.7
3,753,908	+				-0.2
3,753,908	+				-0.8
3,753,909	-				-2.5
3,753,909	-				+0.9
3,753,909	-				+0.1
3,753,909	-				-2.4
3,753,909	-				+0.8
3,753,909	-				+0.5
3,753,909	-				-1.7
3,753,909	-				-1.0
3,753,913	+				+0.1
3,753,913	+				+0.5
3,753,913	+				-0.8
3,753,913	+				-0.2
3,753,913	+				+0.1
3,753,914	-				-3.7
3,753,917	+				-0.2
3,753,917	+				-1.2
3,753,918	-				-3.0
3,753,984	+				-3.8
3,753,985	-				-2.6
3,754,352	-		ABIE40_RS18775	0.11	-2.8
3,754,352	-		ABIE40_RS18775	0.11	-4.6
3,754,352	-		ABIE40_RS18775	0.11	-4.0
3,754,352	-		ABIE40_RS18775	0.11	-2.8
3,754,398	+		ABIE40_RS18775	0.12	-2.3
3,754,398	+		ABIE40_RS18775	0.12	-3.6
3,754,399	-		ABIE40_RS18775	0.12	-2.6
3,754,399	-		ABIE40_RS18775	0.12	-1.5
3,754,404	+		ABIE40_RS18775	0.12	-3.2
3,754,405	-		ABIE40_RS18775	0.12	-4.4
3,754,437	+		ABIE40_RS18775	0.13	-0.6
3,754,437	+		ABIE40_RS18775	0.13	-3.8
3,754,437	+		ABIE40_RS18775	0.13	-1.5
3,754,437	+		ABIE40_RS18775	0.13	+1.2
3,754,437	+		ABIE40_RS18775	0.13	-0.6
3,754,438	-		ABIE40_RS18775	0.13	-1.8
3,754,438	-		ABIE40_RS18775	0.13	-4.1
3,754,438	-		ABIE40_RS18775	0.13	-4.9
3,754,438	-		ABIE40_RS18775	0.13	-1.8
3,754,438	-		ABIE40_RS18775	0.13	-3.9
3,754,442	-		ABIE40_RS18775	0.14	-3.5
3,754,442	-		ABIE40_RS18775	0.14	-1.6
3,754,442	-		ABIE40_RS18775	0.14	-0.6
3,754,479	+		ABIE40_RS18775	0.15	-1.6
3,754,479	+		ABIE40_RS18775	0.15	-2.8
3,754,480	-		ABIE40_RS18775	0.15	-2.3
3,754,480	-		ABIE40_RS18775	0.15	-3.1
3,754,488	+		ABIE40_RS18775	0.15	-2.2
3,754,488	+		ABIE40_RS18775	0.15	-3.6
3,754,489	-		ABIE40_RS18775	0.15	-3.0
3,754,594	+		ABIE40_RS18775	0.18	-3.6
3,754,594	+		ABIE40_RS18775	0.18	-2.6
3,754,594	+		ABIE40_RS18775	0.18	-3.3
3,754,596	+		ABIE40_RS18775	0.18	-3.1
3,754,596	+		ABIE40_RS18775	0.18	-3.9
3,754,597	-		ABIE40_RS18775	0.18	-3.0
3,754,597	-		ABIE40_RS18775	0.18	+0.2
3,754,723	+		ABIE40_RS18775	0.22	-3.6
3,754,808	-		ABIE40_RS18775	0.24	-1.9
3,754,837	-		ABIE40_RS18775	0.25	-2.4
3,754,852	+		ABIE40_RS18775	0.25	-3.1
3,754,852	+		ABIE40_RS18775	0.25	-0.4
3,754,852	+		ABIE40_RS18775	0.25	-1.1
3,754,853	-		ABIE40_RS18775	0.25	-0.4
3,754,853	-		ABIE40_RS18775	0.25	+1.2
3,754,853	-		ABIE40_RS18775	0.25	-4.3
3,754,853	-		ABIE40_RS18775	0.25	-2.0
3,754,933	-		ABIE40_RS18775	0.28	-1.0
3,754,977	+		ABIE40_RS18775	0.29	-3.2
3,754,978	-		ABIE40_RS18775	0.29	-3.0
3,755,001	+		ABIE40_RS18775	0.30	-3.4
3,755,001	+		ABIE40_RS18775	0.30	-0.4
3,755,002	-		ABIE40_RS18775	0.30	-0.4
3,755,098	+		ABIE40_RS18775	0.32	-3.0
3,755,099	-		ABIE40_RS18775	0.32	-2.3
3,755,099	-		ABIE40_RS18775	0.32	-1.6
3,755,188	+		ABIE40_RS18775	0.35	-2.8
3,755,188	+		ABIE40_RS18775	0.35	-3.0
3,755,188	+		ABIE40_RS18775	0.35	-2.3
3,755,189	-		ABIE40_RS18775	0.35	-3.2
3,755,189	-		ABIE40_RS18775	0.35	-2.9
3,755,189	-		ABIE40_RS18775	0.35	-2.0
3,755,189	-		ABIE40_RS18775	0.35	-3.6
3,755,299	+		ABIE40_RS18775	0.38	-2.2
3,755,299	+		ABIE40_RS18775	0.38	-2.7
3,755,300	-		ABIE40_RS18775	0.38	-3.6
3,755,340	+		ABIE40_RS18775	0.39	-3.3
3,755,341	-		ABIE40_RS18775	0.39	-2.9
3,755,343	+		ABIE40_RS18775	0.39	-3.3
3,755,343	+		ABIE40_RS18775	0.39	-0.8
3,755,344	-		ABIE40_RS18775	0.40	-3.9
3,755,355	+		ABIE40_RS18775	0.40	-2.5
3,755,356	-		ABIE40_RS18775	0.40	-3.2
3,755,356	-		ABIE40_RS18775	0.40	-4.7
3,755,356	-		ABIE40_RS18775	0.40	-2.6
3,755,389	+		ABIE40_RS18775	0.41	-3.5
3,755,391	+		ABIE40_RS18775	0.41	-3.7
3,755,392	-		ABIE40_RS18775	0.41	-3.3
3,755,526	+		ABIE40_RS18775	0.45	-2.8
3,755,527	-		ABIE40_RS18775	0.45	-0.4
3,755,527	-		ABIE40_RS18775	0.45	-2.0
3,755,527	-		ABIE40_RS18775	0.45	-3.5
3,755,527	-		ABIE40_RS18775	0.45	-2.8
3,755,557	-		ABIE40_RS18775	0.46	-1.3
3,755,557	-		ABIE40_RS18775	0.46	-2.5
3,755,662	+		ABIE40_RS18775	0.49	-0.6
3,755,727	+		ABIE40_RS18775	0.51	-1.0
3,755,727	+		ABIE40_RS18775	0.51	-1.5
3,755,727	+		ABIE40_RS18775	0.51	+0.2
3,755,727	+		ABIE40_RS18775	0.51	-2.9
3,755,727	+		ABIE40_RS18775	0.51	+2.2
3,755,728	-		ABIE40_RS18775	0.51	-4.2
3,755,728	-		ABIE40_RS18775	0.51	-2.5
3,755,728	-		ABIE40_RS18775	0.51	-3.8
3,755,728	-		ABIE40_RS18775	0.51	-2.5
3,755,728	-		ABIE40_RS18775	0.51	-2.2
3,755,728	-		ABIE40_RS18775	0.51	-1.8
3,755,754	+		ABIE40_RS18775	0.51	-2.8
3,755,754	+		ABIE40_RS18775	0.51	-3.3
3,755,754	+		ABIE40_RS18775	0.51	-1.6
3,755,755	-		ABIE40_RS18775	0.51	-3.3
3,755,755	-		ABIE40_RS18775	0.51	-2.1
3,755,858	-		ABIE40_RS18775	0.54	-2.1
3,755,916	+		ABIE40_RS18775	0.56	-3.5
3,755,916	+		ABIE40_RS18775	0.56	-2.6
3,755,916	+		ABIE40_RS18775	0.56	-3.4
3,755,917	-		ABIE40_RS18775	0.56	-2.9
3,755,917	-		ABIE40_RS18775	0.56	-2.3
3,756,003	+		ABIE40_RS18775	0.59	-0.4
3,756,003	+		ABIE40_RS18775	0.59	+1.2
3,756,003	+		ABIE40_RS18775	0.59	-4.5
3,756,004	-		ABIE40_RS18775	0.59	-2.5
3,756,084	+		ABIE40_RS18775	0.61	+2.2
3,756,085	-		ABIE40_RS18775	0.61	-3.8
3,756,085	-		ABIE40_RS18775	0.61	-2.6
3,756,092	-		ABIE40_RS18775	0.61	-3.9
3,756,184	+		ABIE40_RS18775	0.64	-0.8
3,756,184	+		ABIE40_RS18775	0.64	-1.7
3,756,246	+		ABIE40_RS18775	0.66	-1.8
3,756,331	+		ABIE40_RS18775	0.68	-3.4
3,756,332	-		ABIE40_RS18775	0.68	-4.0
3,756,355	+		ABIE40_RS18775	0.69	-3.1
3,756,355	+		ABIE40_RS18775	0.69	-1.0
3,756,355	+		ABIE40_RS18775	0.69	-1.0
3,756,355	+		ABIE40_RS18775	0.69	-0.8
3,756,356	-		ABIE40_RS18775	0.69	-1.4
3,756,356	-		ABIE40_RS18775	0.69	-2.9
3,756,356	-		ABIE40_RS18775	0.69	-1.6
3,756,356	-		ABIE40_RS18775	0.69	-3.9
3,756,356	-		ABIE40_RS18775	0.69	-3.3
3,756,469	+		ABIE40_RS18775	0.72	-1.0
3,756,469	+		ABIE40_RS18775	0.72	-2.3
3,756,470	-		ABIE40_RS18775	0.72	-3.4
3,756,470	-		ABIE40_RS18775	0.72	-0.8
3,756,559	+		ABIE40_RS18775	0.75	-4.3
3,756,613	+		ABIE40_RS18775	0.76	-3.7
3,756,613	+		ABIE40_RS18775	0.76	-2.4
3,756,613	+		ABIE40_RS18775	0.76	+0.2
3,756,613	+		ABIE40_RS18775	0.76	-4.0
3,756,613	+		ABIE40_RS18775	0.76	-3.1
3,756,614	-		ABIE40_RS18775	0.76	-1.5
3,756,614	-		ABIE40_RS18775	0.76	-2.8
3,756,614	-		ABIE40_RS18775	0.76	-3.2
3,756,614	-		ABIE40_RS18775	0.76	-2.7
3,756,614	-		ABIE40_RS18775	0.76	-1.9
3,756,614	-		ABIE40_RS18775	0.76	-3.5
3,756,679	+		ABIE40_RS18775	0.78	-3.2
3,756,679	+		ABIE40_RS18775	0.78	-2.8
3,756,679	+		ABIE40_RS18775	0.78	-3.6
3,756,679	+		ABIE40_RS18775	0.78	-4.4
3,756,680	-		ABIE40_RS18775	0.78	-1.3
3,756,680	-		ABIE40_RS18775	0.78	-2.4
3,756,680	-		ABIE40_RS18775	0.78	-0.6
3,756,680	-		ABIE40_RS18775	0.78	-2.3
3,756,680	-		ABIE40_RS18775	0.78	-0.6
3,756,768	-		ABIE40_RS18775	0.81	-3.2
3,756,768	-		ABIE40_RS18775	0.81	-2.4
3,756,823	+		ABIE40_RS18775	0.82	-2.6
3,756,823	+		ABIE40_RS18775	0.82	-0.6
3,756,824	-		ABIE40_RS18775	0.82	-2.0
3,757,092	-		ABIE40_RS18775	0.90	-1.1
3,757,110	-				-3.5
3,757,237	+				-3.9
3,757,237	+				-2.7
3,757,237	+				-0.6
3,757,238	-				-0.6
3,757,238	-				-1.1
3,757,238	-				-2.5
3,757,291	+				-1.6
3,757,292	-				-2.0
3,757,292	-				-0.1
3,757,541	+				-4.2
3,757,562	+				-0.6
3,757,562	+				+1.2
3,757,562	+				+1.2
3,757,567	-				-0.1
3,757,574	-				+0.7
3,757,577	+				+0.8
3,757,642	+		ABIE40_RS18780	0.11	+1.2
3,757,642	+		ABIE40_RS18780	0.11	-1.0
3,757,643	-		ABIE40_RS18780	0.12	+0.4
3,757,643	-		ABIE40_RS18780	0.12	-1.3
3,757,643	-		ABIE40_RS18780	0.12	-1.2
3,757,643	-		ABIE40_RS18780	0.12	-0.2
3,757,714	+		ABIE40_RS18780	0.21	-1.9
3,757,714	+		ABIE40_RS18780	0.21	+0.8
3,757,930	+		ABIE40_RS18780	0.50	+0.7
3,757,930	+		ABIE40_RS18780	0.50	+1.2
3,757,930	+		ABIE40_RS18780	0.50	+0.2
3,757,930	+		ABIE40_RS18780	0.50	-2.4
3,757,930	+		ABIE40_RS18780	0.50	-2.0
3,757,930	+		ABIE40_RS18780	0.50	-1.5
3,757,930	+		ABIE40_RS18780	0.50	+0.7
3,757,930	+		ABIE40_RS18780	0.50	-1.7
3,757,930	+		ABIE40_RS18780	0.50	-0.2
3,757,930	+		ABIE40_RS18780	0.50	-0.2
3,757,930	+		ABIE40_RS18780	0.50	-1.7
3,757,931	-		ABIE40_RS18780	0.50	-1.1
3,757,931	-		ABIE40_RS18780	0.50	-2.5
3,757,931	-		ABIE40_RS18780	0.50	+0.3
3,757,931	-		ABIE40_RS18780	0.50	-1.9
3,757,931	-		ABIE40_RS18780	0.50	+0.7
3,758,083	+		ABIE40_RS18780	0.71	-0.4
3,758,084	-		ABIE40_RS18780	0.71	+0.2
3,758,098	+		ABIE40_RS18780	0.73	+0.8
3,758,098	+		ABIE40_RS18780	0.73	+1.0
3,758,098	+		ABIE40_RS18780	0.73	+0.0
3,758,099	-		ABIE40_RS18780	0.73	+1.1
3,758,189	-		ABIE40_RS18780	0.85	+0.6
3,758,200	+		ABIE40_RS18780	0.87	-0.8
3,758,200	+		ABIE40_RS18780	0.87	+0.8
3,758,200	+		ABIE40_RS18780	0.87	-0.2
3,758,201	-		ABIE40_RS18780	0.87	-4.0
3,758,292	-				+0.3
3,758,383	-				+0.9
3,758,391	+				+0.6
3,758,398	+				-0.1
3,758,405	+				-2.3
3,758,417	+				-0.5
3,758,418	-				+0.3
3,758,418	-				-0.6
3,758,418	-				+0.5