Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS18380

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
3,670,188	-		ABIE40_RS18375	0.14	+1.2
3,670,188	-		ABIE40_RS18375	0.14	+0.3
3,670,188	-		ABIE40_RS18375	0.14	-2.6
3,670,188	-		ABIE40_RS18375	0.14	-1.0
3,670,337	+		ABIE40_RS18375	0.32	-0.7
3,670,337	+		ABIE40_RS18375	0.32	+1.8
3,670,338	-		ABIE40_RS18375	0.32	-1.7
3,670,338	-		ABIE40_RS18375	0.32	+0.8
3,670,339	+		ABIE40_RS18375	0.32	+2.2
3,670,374	+		ABIE40_RS18375	0.36	-2.2
3,670,374	+		ABIE40_RS18375	0.36	-0.7
3,670,374	+		ABIE40_RS18375	0.36	+0.8
3,670,374	+		ABIE40_RS18375	0.36	+1.8
3,670,375	-		ABIE40_RS18375	0.37	-0.6
3,670,375	-		ABIE40_RS18375	0.37	+0.5
3,670,382	+		ABIE40_RS18375	0.37	-0.4
3,670,382	+		ABIE40_RS18375	0.37	-1.0
3,670,382	+		ABIE40_RS18375	0.37	+1.4
3,670,382	+		ABIE40_RS18375	0.37	+1.7
3,670,383	-		ABIE40_RS18375	0.37	-0.3
3,670,383	-		ABIE40_RS18375	0.37	-0.2
3,670,383	-		ABIE40_RS18375	0.37	-4.1
3,670,424	-		ABIE40_RS18375	0.42	+0.5
3,670,469	-		ABIE40_RS18375	0.48	-2.3
3,670,469	-		ABIE40_RS18375	0.48	-2.1
3,670,469	-		ABIE40_RS18375	0.48	-2.4
3,670,469	-		ABIE40_RS18375	0.48	+0.1
3,670,469	-		ABIE40_RS18375	0.48	-3.3
3,670,696	+		ABIE40_RS18375	0.76	-0.5
3,670,696	+		ABIE40_RS18375	0.76	+0.9
3,670,763	+		ABIE40_RS18375	0.84	-0.1
3,670,763	+		ABIE40_RS18375	0.84	-0.2
3,670,763	+		ABIE40_RS18375	0.84	-4.1
3,670,763	+		ABIE40_RS18375	0.84	+1.0
3,670,763	+		ABIE40_RS18375	0.84	+1.0
3,670,764	-		ABIE40_RS18375	0.84	+0.1
3,670,796	+		ABIE40_RS18375	0.88	+0.6
3,670,796	+		ABIE40_RS18375	0.88	-0.8
3,670,796	+		ABIE40_RS18375	0.88	+0.2
3,670,797	-		ABIE40_RS18375	0.88	-0.8
3,670,797	-		ABIE40_RS18375	0.88	-0.2
3,670,811	+		ABIE40_RS18375	0.90	-2.9
3,670,811	+		ABIE40_RS18375	0.90	+0.2
3,670,811	+		ABIE40_RS18375	0.90	-0.2
3,670,811	+		ABIE40_RS18375	0.90	-2.4
3,670,811	+		ABIE40_RS18375	0.90	+0.8
3,670,811	+		ABIE40_RS18375	0.90	-0.4
3,670,811	+		ABIE40_RS18375	0.90	-1.3
3,670,811	+		ABIE40_RS18375	0.90	-0.2
3,670,811	+		ABIE40_RS18375	0.90	-0.8
3,670,811	+		ABIE40_RS18375	0.90	+2.4
3,670,811	+		ABIE40_RS18375	0.90	+1.0
3,670,811	+		ABIE40_RS18375	0.90	-1.0
3,670,811	+		ABIE40_RS18375	0.90	+2.2
3,670,812	-		ABIE40_RS18375	0.90	-0.7
3,670,812	-		ABIE40_RS18375	0.90	-0.7
3,670,812	-		ABIE40_RS18375	0.90	+0.2
3,670,812	-		ABIE40_RS18375	0.90	-0.2
3,670,812	-		ABIE40_RS18375	0.90	-1.7
3,670,812	-		ABIE40_RS18375	0.90	-0.2
3,670,812	-		ABIE40_RS18375	0.90	-0.8
3,670,812	-		ABIE40_RS18375	0.90	+1.0
3,670,817	+				-1.5
3,670,817	+				-1.4
3,670,818	-				+0.1
3,670,818	-				+0.7
3,670,833	+				-0.5
3,670,834	-				-2.9
3,670,936	+				-1.3
3,670,936	+				-0.3
3,670,936	+				+1.2
3,670,937	-				-4.1
3,670,937	-				-5.6
3,670,939	-				-2.5
3,670,939	-				-0.4
3,671,157	+				-5.0
3,671,158	-				-3.8
3,671,162	+				-3.6
3,671,163	-				-2.6
3,671,217	+				-3.8
3,671,217	+				-2.6
3,671,218	-				-4.7
3,671,434	-		ABIE40_RS18380	0.21	-1.7
3,671,436	+		ABIE40_RS18380	0.21	-3.7
3,671,437	-		ABIE40_RS18380	0.21	+0.6
3,671,437	-		ABIE40_RS18380	0.21	-4.1
3,671,518	+		ABIE40_RS18380	0.27	-3.4
3,671,518	+		ABIE40_RS18380	0.27	-3.0
3,671,518	+		ABIE40_RS18380	0.27	-3.4
3,671,519	-		ABIE40_RS18380	0.27	-4.1
3,671,519	-		ABIE40_RS18380	0.27	-4.2
3,671,534	+		ABIE40_RS18380	0.28	-4.2
3,671,534	+		ABIE40_RS18380	0.28	-4.1
3,671,534	+		ABIE40_RS18380	0.28	-4.1
3,671,534	+		ABIE40_RS18380	0.28	-2.4
3,671,534	+		ABIE40_RS18380	0.28	-2.2
3,671,535	-		ABIE40_RS18380	0.28	-4.9
3,671,535	-		ABIE40_RS18380	0.28	-3.5
3,671,535	-		ABIE40_RS18380	0.28	-0.8
3,671,535	-		ABIE40_RS18380	0.28	-1.3
3,671,535	-		ABIE40_RS18380	0.28	-0.6
3,671,739	+		ABIE40_RS18380	0.43	-5.0
3,671,739	+		ABIE40_RS18380	0.43	-2.4
3,671,740	-		ABIE40_RS18380	0.43	-2.5
3,671,752	-		ABIE40_RS18380	0.44	-3.1
3,671,752	-		ABIE40_RS18380	0.44	+0.2
3,671,926	-		ABIE40_RS18380	0.56	-1.7
3,671,961	+		ABIE40_RS18380	0.59	-2.4
3,671,962	-		ABIE40_RS18380	0.59	-2.4
3,671,962	-		ABIE40_RS18380	0.59	-0.2
3,672,035	+		ABIE40_RS18380	0.64	-5.9
3,672,035	+		ABIE40_RS18380	0.64	-2.4
3,672,117	+		ABIE40_RS18380	0.70	-1.2
3,672,117	+		ABIE40_RS18380	0.70	-1.7
3,672,117	+		ABIE40_RS18380	0.70	-3.8
3,672,117	+		ABIE40_RS18380	0.70	-2.1
3,672,118	-		ABIE40_RS18380	0.70	-3.3
3,672,118	-		ABIE40_RS18380	0.70	-4.2
3,672,118	-		ABIE40_RS18380	0.70	-0.8
3,672,119	+		ABIE40_RS18380	0.70	-3.6
3,672,119	+		ABIE40_RS18380	0.70	-1.4
3,672,119	+		ABIE40_RS18380	0.70	-3.6
3,672,119	+		ABIE40_RS18380	0.70	-2.5
3,672,119	+		ABIE40_RS18380	0.70	-3.8
3,672,119	+		ABIE40_RS18380	0.70	-3.9
3,672,119	+		ABIE40_RS18380	0.70	-1.7
3,672,119	+		ABIE40_RS18380	0.70	-5.0
3,672,119	+		ABIE40_RS18380	0.70	-4.9
3,672,119	+		ABIE40_RS18380	0.70	-3.0
3,672,120	-		ABIE40_RS18380	0.70	-3.5
3,672,120	-		ABIE40_RS18380	0.70	-2.0
3,672,120	-		ABIE40_RS18380	0.70	-5.3
3,672,120	-		ABIE40_RS18380	0.70	-2.8
3,672,120	-		ABIE40_RS18380	0.70	-3.2
3,672,137	+		ABIE40_RS18380	0.71	-2.0
3,672,137	+		ABIE40_RS18380	0.71	-5.4
3,672,152	+		ABIE40_RS18380	0.72	-3.8
3,672,152	+		ABIE40_RS18380	0.72	-4.5
3,672,428	+				-2.5
3,672,429	-				-4.2
3,672,552	-				-0.2
3,672,558	+				-2.9
3,672,558	+				-2.1
3,672,558	+				-0.9
3,672,558	+				-0.9
3,672,559	-				-1.9
3,672,559	-				+2.7
3,672,559	-				-0.7
3,672,559	-				-2.5
3,672,559	-				+0.1
3,672,559	-				-1.6
3,672,615	+				-0.4
3,672,617	+				-1.0
3,672,618	-				+1.1
3,672,672	+				+0.3
3,672,673	-				+1.1
3,672,768	+		ABIE40_RS18385	0.20	+0.0
3,672,768	+		ABIE40_RS18385	0.20	-1.3
3,672,769	-		ABIE40_RS18385	0.20	+0.1
3,672,769	-		ABIE40_RS18385	0.20	-3.4
3,672,769	-		ABIE40_RS18385	0.20	+0.7
3,672,769	-		ABIE40_RS18385	0.20	-1.3
3,672,885	+		ABIE40_RS18385	0.34	+0.2
3,672,886	-		ABIE40_RS18385	0.34	+0.6
3,672,886	-		ABIE40_RS18385	0.34	-0.9
3,672,886	-		ABIE40_RS18385	0.34	+1.1
3,673,004	+		ABIE40_RS18385	0.48	+0.5
3,673,080	-		ABIE40_RS18385	0.58	+0.5
3,673,116	-		ABIE40_RS18385	0.62	+0.3
3,673,116	-		ABIE40_RS18385	0.62	-1.6
3,673,127	+		ABIE40_RS18385	0.63	+0.4
3,673,127	+		ABIE40_RS18385	0.63	+0.5
3,673,127	+		ABIE40_RS18385	0.63	+0.4
3,673,127	+		ABIE40_RS18385	0.63	-0.2
3,673,127	+		ABIE40_RS18385	0.63	-0.2
3,673,128	-		ABIE40_RS18385	0.63	+1.5
3,673,128	-		ABIE40_RS18385	0.63	+1.5
3,673,173	+		ABIE40_RS18385	0.69	-1.7
3,673,173	+		ABIE40_RS18385	0.69	-3.1
3,673,173	+		ABIE40_RS18385	0.69	+0.9
3,673,173	+		ABIE40_RS18385	0.69	-1.3
3,673,173	+		ABIE40_RS18385	0.69	-0.1
3,673,173	+		ABIE40_RS18385	0.69	+2.1
3,673,174	-		ABIE40_RS18385	0.69	+0.1
3,673,174	-		ABIE40_RS18385	0.69	+0.0
3,673,181	+		ABIE40_RS18385	0.70	+0.3
3,673,293	+		ABIE40_RS18385	0.83	+0.5
3,673,410	+				-1.2
3,673,410	+				+2.3
3,673,411	-				+0.5
3,673,413	+				+1.8
3,673,413	+				+1.8
3,673,414	-				-1.2
3,673,414	-				-0.4
3,673,414	-				-0.1
3,673,434	+				+1.0
3,673,434	+				-2.1
3,673,434	+				-0.6
3,673,434	+				-0.8
3,673,434	+				+0.5
3,673,434	+				+1.2
3,673,434	+				-1.0
3,673,434	+				-0.0
3,673,435	-				+0.2
3,673,435	-				+0.7
3,673,435	-				-2.4
3,673,435	-				-0.6
3,673,491	-				-1.6
3,673,491	-				-2.8
3,673,492	+				-2.0
3,673,492	+				-0.7
3,673,492	+				-0.4
3,673,492	+				+1.7
3,673,493	-				-0.4
3,673,493	-				+0.4
3,673,493	-				+2.2
3,673,493	-				-1.7
3,673,493	-				+1.0
3,673,493	-				+1.0
3,673,493	-				+2.2
3,673,493	-				-0.5
3,673,493	-				-3.4
3,673,493	-				-0.6
3,673,493	-				+0.5
3,673,512	-				+0.3
3,673,512	-				-0.0