Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS17705

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
3,532,791	+		ABIE40_RS17695	0.41	+0.8
3,532,791	+		ABIE40_RS17695	0.41	-0.3
3,532,791	+		ABIE40_RS17695	0.41	-1.2
3,532,791	+		ABIE40_RS17695	0.41	-0.1
3,532,792	-		ABIE40_RS17695	0.41	-1.5
3,532,792	-		ABIE40_RS17695	0.41	-1.4
3,532,792	-		ABIE40_RS17695	0.41	-2.6
3,532,792	-		ABIE40_RS17695	0.41	-0.9
3,532,878	+		ABIE40_RS17695	0.48	-0.9
3,532,878	+		ABIE40_RS17695	0.48	-0.6
3,532,878	+		ABIE40_RS17695	0.48	-0.6
3,532,878	+		ABIE40_RS17695	0.48	-1.1
3,532,878	+		ABIE40_RS17695	0.48	-0.1
3,532,878	+		ABIE40_RS17695	0.48	-0.7
3,532,879	-		ABIE40_RS17695	0.48	-0.6
3,532,879	-		ABIE40_RS17695	0.48	+2.1
3,532,879	-		ABIE40_RS17695	0.48	+0.4
3,532,879	-		ABIE40_RS17695	0.48	-2.6
3,532,879	-		ABIE40_RS17695	0.48	-4.0
3,532,879	-		ABIE40_RS17695	0.48	-2.1
3,532,902	+		ABIE40_RS17695	0.50	+0.3
3,532,902	+		ABIE40_RS17695	0.50	-2.1
3,532,989	+		ABIE40_RS17695	0.57	+1.4
3,532,989	+		ABIE40_RS17695	0.57	+0.1
3,532,989	+		ABIE40_RS17695	0.57	-4.0
3,532,989	+		ABIE40_RS17695	0.57	+0.7
3,532,989	+		ABIE40_RS17695	0.57	-0.6
3,532,990	-		ABIE40_RS17695	0.57	+2.3
3,532,990	-		ABIE40_RS17695	0.57	-3.4
3,533,091	+		ABIE40_RS17695	0.65	+0.1
3,533,092	-		ABIE40_RS17695	0.65	+0.5
3,533,104	-		ABIE40_RS17695	0.66	+3.2
3,533,115	+		ABIE40_RS17695	0.67	-0.1
3,533,115	+		ABIE40_RS17695	0.67	-1.4
3,533,115	+		ABIE40_RS17695	0.67	+0.9
3,533,116	-		ABIE40_RS17695	0.67	-1.4
3,533,154	+		ABIE40_RS17695	0.70	+0.6
3,533,154	+		ABIE40_RS17695	0.70	-2.9
3,533,220	+		ABIE40_RS17695	0.75	-0.2
3,533,220	+		ABIE40_RS17695	0.75	+0.9
3,533,555	+		ABIE40_RS17700	0.10	+1.2
3,533,555	+		ABIE40_RS17700	0.10	-1.6
3,533,555	+		ABIE40_RS17700	0.10	+0.6
3,533,555	+		ABIE40_RS17700	0.10	-2.9
3,533,555	+		ABIE40_RS17700	0.10	-0.6
3,533,556	-		ABIE40_RS17700	0.11	-3.2
3,533,556	-		ABIE40_RS17700	0.11	-1.9
3,533,556	-		ABIE40_RS17700	0.11	+1.2
3,533,556	-		ABIE40_RS17700	0.11	+0.2
3,533,556	-		ABIE40_RS17700	0.11	-0.4
3,533,556	-		ABIE40_RS17700	0.11	+0.7
3,533,762	+				+0.1
3,533,763	-				+1.5
3,533,763	-				+0.5
3,534,263	+		ABIE40_RS17705	0.42	-0.3
3,534,312	+		ABIE40_RS17705	0.47	-2.9
3,534,313	-		ABIE40_RS17705	0.47	-0.7
3,534,313	-		ABIE40_RS17705	0.47	-2.1
3,534,313	-		ABIE40_RS17705	0.47	-1.5
3,534,416	+		ABIE40_RS17705	0.56	+0.1
3,534,416	+		ABIE40_RS17705	0.56	-3.1
3,534,417	-		ABIE40_RS17705	0.56	-3.7
3,534,947	+				+1.1
3,534,947	+				+1.4
3,534,948	-				-1.2
3,535,092	+		ABIE40_RS17710	0.13	+1.9
3,535,093	-		ABIE40_RS17710	0.13	-2.7
3,535,093	-		ABIE40_RS17710	0.13	-1.0
3,535,093	-		ABIE40_RS17710	0.13	-1.9
3,535,094	+		ABIE40_RS17710	0.13	-0.9
3,535,094	+		ABIE40_RS17710	0.13	+0.2
3,535,094	+		ABIE40_RS17710	0.13	+0.2
3,535,095	-		ABIE40_RS17710	0.13	-1.5
3,535,095	-		ABIE40_RS17710	0.13	+1.4
3,535,182	+		ABIE40_RS17710	0.21	-1.2
3,535,211	+		ABIE40_RS17710	0.24	-1.5
3,535,212	-		ABIE40_RS17710	0.24	-1.1
3,535,212	-		ABIE40_RS17710	0.24	+0.2
3,535,233	+		ABIE40_RS17710	0.26	-1.4
3,535,234	-		ABIE40_RS17710	0.26	+1.9
3,535,452	+		ABIE40_RS17710	0.45	-0.6
3,535,453	-		ABIE40_RS17710	0.45	-1.5
3,535,491	-		ABIE40_RS17710	0.49	+0.4
3,535,499	+		ABIE40_RS17710	0.49	+0.3
3,535,499	+		ABIE40_RS17710	0.49	-0.2
3,535,500	-		ABIE40_RS17710	0.49	-3.6
3,535,559	+		ABIE40_RS17710	0.55	-0.2
3,535,559	+		ABIE40_RS17710	0.55	-0.7
3,535,560	-		ABIE40_RS17710	0.55	+1.1
3,535,695	+		ABIE40_RS17710	0.67	-0.3
3,535,695	+		ABIE40_RS17710	0.67	-2.1
3,535,702	-		ABIE40_RS17710	0.67	+1.7
3,535,763	+		ABIE40_RS17710	0.73	-2.8
3,535,763	+		ABIE40_RS17710	0.73	-1.5
3,535,763	+		ABIE40_RS17710	0.73	-2.8
3,535,763	+		ABIE40_RS17710	0.73	-2.3
3,535,763	+		ABIE40_RS17710	0.73	-3.2
3,535,764	-		ABIE40_RS17710	0.73	-2.0
3,535,764	-		ABIE40_RS17710	0.73	+0.9
3,535,764	-		ABIE40_RS17710	0.73	-1.9
3,535,764	-		ABIE40_RS17710	0.73	+0.6
3,535,764	-		ABIE40_RS17710	0.73	+0.6
3,535,766	+		ABIE40_RS17710	0.73	-2.6
3,535,766	+		ABIE40_RS17710	0.73	-1.6
3,535,766	+		ABIE40_RS17710	0.73	-1.6
3,535,766	+		ABIE40_RS17710	0.73	+1.1
3,535,766	+		ABIE40_RS17710	0.73	-2.8
3,535,766	+		ABIE40_RS17710	0.73	-2.1
3,535,766	+		ABIE40_RS17710	0.73	-1.8
3,535,767	-		ABIE40_RS17710	0.73	+0.2
3,535,767	-		ABIE40_RS17710	0.73	+0.5
3,535,767	-		ABIE40_RS17710	0.73	-1.1
3,535,767	-		ABIE40_RS17710	0.73	-1.2
3,535,860	+		ABIE40_RS17710	0.81	-2.2
3,535,860	+		ABIE40_RS17710	0.81	-1.2
3,535,861	-		ABIE40_RS17710	0.82	-1.2
3,535,861	-		ABIE40_RS17710	0.82	-0.9
3,535,861	-		ABIE40_RS17710	0.82	-1.7
3,535,861	-		ABIE40_RS17710	0.82	-1.5
3,535,862	+		ABIE40_RS17710	0.82	+1.6
3,535,862	+		ABIE40_RS17710	0.82	+1.9
3,535,862	+		ABIE40_RS17710	0.82	+0.2
3,535,862	+		ABIE40_RS17710	0.82	+1.2
3,535,863	-		ABIE40_RS17710	0.82	+2.5
3,535,896	-		ABIE40_RS17710	0.85	+1.3