Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS17620

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
3,517,827	-				-2.4
3,517,991	+		ABIE40_RS17615	0.19	+0.2
3,517,991	+		ABIE40_RS17615	0.19	-0.2
3,518,037	-		ABIE40_RS17615	0.24	-1.6
3,518,037	-		ABIE40_RS17615	0.24	-3.0
3,518,049	-		ABIE40_RS17615	0.25	+0.5
3,518,049	-		ABIE40_RS17615	0.25	-2.3
3,518,139	+		ABIE40_RS17615	0.35	+0.3
3,518,283	-		ABIE40_RS17615	0.51	-2.7
3,518,283	-		ABIE40_RS17615	0.51	-2.8
3,518,283	-		ABIE40_RS17615	0.51	-0.9
3,518,363	+		ABIE40_RS17615	0.60	-0.1
3,518,363	+		ABIE40_RS17615	0.60	-0.7
3,518,363	+		ABIE40_RS17615	0.60	-2.7
3,518,364	-		ABIE40_RS17615	0.60	-0.9
3,518,364	-		ABIE40_RS17615	0.60	-1.7
3,518,427	-		ABIE40_RS17615	0.67	+1.0
3,518,478	-		ABIE40_RS17615	0.73	-1.7
3,518,490	-		ABIE40_RS17615	0.74	+1.5
3,518,590	-		ABIE40_RS17615	0.86	+0.3
3,518,762	+				+1.1
3,518,763	-				+0.4
3,518,763	-				+1.4
3,518,805	+				-1.5
3,518,805	+				-2.1
3,518,813	+				+0.5
3,518,813	+				-0.2
3,518,814	-				+0.4
3,518,825	+				+1.2
3,518,825	+				-1.4
3,518,825	+				-0.2
3,518,825	+				+0.3
3,518,826	-				+1.9
3,518,826	-				+1.9
3,518,826	-				+0.9
3,518,826	-				-0.8
3,518,827	+		ABIE40_RS17620	0.10	-1.8
3,518,827	+		ABIE40_RS17620	0.10	-1.1
3,518,827	+		ABIE40_RS17620	0.10	-1.7
3,518,827	+		ABIE40_RS17620	0.10	+0.0
3,518,827	+		ABIE40_RS17620	0.10	-4.7
3,518,827	+		ABIE40_RS17620	0.10	-0.7
3,518,828	-		ABIE40_RS17620	0.10	+1.9
3,518,828	-		ABIE40_RS17620	0.10	+1.9
3,518,828	-		ABIE40_RS17620	0.10	+0.4
3,518,828	-		ABIE40_RS17620	0.10	-0.4
3,518,828	-		ABIE40_RS17620	0.10	+0.2
3,518,885	+		ABIE40_RS17620	0.18	-2.8
3,518,885	+		ABIE40_RS17620	0.18	-2.2
3,518,886	-		ABIE40_RS17620	0.18	-0.9
3,518,886	-		ABIE40_RS17620	0.18	-0.2
3,518,912	+		ABIE40_RS17620	0.21	-1.1
3,519,032	+		ABIE40_RS17620	0.36	-0.5
3,519,032	+		ABIE40_RS17620	0.36	-0.6
3,519,033	-		ABIE40_RS17620	0.37	-0.4
3,519,033	-		ABIE40_RS17620	0.37	-1.4
3,519,033	-		ABIE40_RS17620	0.37	-0.7
3,519,063	+		ABIE40_RS17620	0.40	-0.1
3,519,111	+		ABIE40_RS17620	0.47	-1.2
3,519,181	-		ABIE40_RS17620	0.56	-2.7
3,519,181	-		ABIE40_RS17620	0.56	-1.9
3,519,195	-		ABIE40_RS17620	0.57	-0.9
3,519,196	+		ABIE40_RS17620	0.58	-0.4
3,519,206	+		ABIE40_RS17620	0.59	-1.2
3,519,206	+		ABIE40_RS17620	0.59	+1.3
3,519,206	+		ABIE40_RS17620	0.59	+0.6
3,519,207	-		ABIE40_RS17620	0.59	+1.0
3,519,233	+		ABIE40_RS17620	0.62	-2.7
3,519,233	+		ABIE40_RS17620	0.62	-1.2
3,519,233	+		ABIE40_RS17620	0.62	-4.9
3,519,233	+		ABIE40_RS17620	0.62	-0.4
3,519,234	-		ABIE40_RS17620	0.62	-0.9
3,519,234	-		ABIE40_RS17620	0.62	-2.6
3,519,234	-		ABIE40_RS17620	0.62	+0.2
3,519,234	-		ABIE40_RS17620	0.62	+0.2
3,519,234	-		ABIE40_RS17620	0.62	-0.2
3,519,234	-		ABIE40_RS17620	0.62	+0.0
3,519,234	-		ABIE40_RS17620	0.62	+0.1
3,519,234	-		ABIE40_RS17620	0.62	+1.8
3,519,236	+		ABIE40_RS17620	0.63	-1.5
3,519,236	+		ABIE40_RS17620	0.63	+0.5
3,519,237	-		ABIE40_RS17620	0.63	-1.2
3,519,237	-		ABIE40_RS17620	0.63	+0.4
3,519,242	+		ABIE40_RS17620	0.63	-1.4
3,519,242	+		ABIE40_RS17620	0.63	-1.2
3,519,242	+		ABIE40_RS17620	0.63	-0.1
3,519,242	+		ABIE40_RS17620	0.63	-0.0
3,519,242	+		ABIE40_RS17620	0.63	-2.7
3,519,243	-		ABIE40_RS17620	0.64	-1.2
3,519,243	-		ABIE40_RS17620	0.64	-0.1
3,519,243	-		ABIE40_RS17620	0.64	+0.2
3,519,243	-		ABIE40_RS17620	0.64	+1.8
3,519,243	-		ABIE40_RS17620	0.64	+0.3
3,519,243	-		ABIE40_RS17620	0.64	+0.5
3,519,243	-		ABIE40_RS17620	0.64	-0.7
3,519,245	+		ABIE40_RS17620	0.64	-1.8
3,519,359	+		ABIE40_RS17620	0.79	+1.6
3,519,359	+		ABIE40_RS17620	0.79	-1.1
3,519,359	+		ABIE40_RS17620	0.79	+0.6
3,519,359	+		ABIE40_RS17620	0.79	+0.3
3,519,530	+				-1.4
3,519,530	+				-0.1
3,519,530	+				+0.6
3,519,530	+				+0.5
3,519,530	+				+1.9
3,519,531	-				+1.7
3,519,531	-				+2.9
3,519,531	-				-2.3
3,519,531	-				-1.8
3,519,531	-				-0.6
3,519,531	-				+1.9
3,519,531	-				-0.5
3,519,572	+				+0.2
3,519,572	+				+3.7
3,519,572	+				-0.7
3,519,572	+				+0.7
3,519,572	+				+1.5
3,519,573	-				-2.2
3,519,573	-				+0.1
3,519,573	-				+0.6
3,519,573	-				+1.0
3,519,573	-				-2.2
3,519,573	-				+1.1
3,519,574	+				+1.1
3,519,574	+				+1.0
3,519,574	+				+1.1
3,519,574	+				-1.7
3,519,574	+				-1.1
3,519,575	-				+0.2
3,520,211	+				+1.5
3,520,212	-				-1.4
3,520,212	-				+0.5
3,520,219	+				-2.5
3,520,223	+				-0.5
3,520,223	+				-0.6
3,520,223	+				-0.4
3,520,223	+				+0.1
3,520,223	+				-0.1
3,520,223	+				-1.9
3,520,223	+				-0.1
3,520,223	+				+0.8
3,520,224	-				+3.3
3,520,224	-				+0.6
3,520,224	-				+0.6
3,520,224	-				+0.1
3,520,224	-				+1.6
3,520,224	-				-0.3
3,520,224	-				+0.7
3,520,224	-				-1.6
3,520,224	-				-0.7
3,520,224	-				-1.4
3,520,224	-				+1.5
3,520,224	-				+2.3
3,520,341	-		ABIE40_RS17630	0.23	-3.0
3,520,341	-		ABIE40_RS17630	0.23	-1.0
3,520,448	+		ABIE40_RS17630	0.40	-0.9
3,520,449	-		ABIE40_RS17630	0.40	-0.9
3,520,449	-		ABIE40_RS17630	0.40	+0.2
3,520,490	+		ABIE40_RS17630	0.46	+0.1