Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS10480

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
2,026,404	-				-0.1
2,026,408	-				-0.4
2,026,464	+				-2.7
2,026,506	-				-1.6
2,026,506	-				+3.0
2,026,517	+				-1.5
2,026,557	+				+0.6
2,026,557	+				+0.6
2,026,558	-				+2.1
2,026,593	+				-0.1
2,026,948	+		ABIE40_RS10480	0.18	-1.2
2,026,948	+		ABIE40_RS10480	0.18	+2.8
2,026,948	+		ABIE40_RS10480	0.18	+0.2
2,026,948	+		ABIE40_RS10480	0.18	-2.2
2,026,949	-		ABIE40_RS10480	0.18	-3.6
2,026,949	-		ABIE40_RS10480	0.18	+0.7
2,026,949	-		ABIE40_RS10480	0.18	+0.2
2,026,949	-		ABIE40_RS10480	0.18	-0.2
2,026,949	-		ABIE40_RS10480	0.18	-1.1
2,026,966	+		ABIE40_RS10480	0.19	-0.0
2,026,966	+		ABIE40_RS10480	0.19	+0.3
2,026,967	-		ABIE40_RS10480	0.19	+2.3
2,027,209	+		ABIE40_RS10480	0.32	+2.3
2,027,215	+		ABIE40_RS10480	0.32	-2.1
2,027,216	-		ABIE40_RS10480	0.32	+0.4
2,027,270	-		ABIE40_RS10480	0.35	-0.8
2,027,274	+		ABIE40_RS10480	0.35	-0.1
2,027,302	+		ABIE40_RS10480	0.36	+0.9
2,027,346	+		ABIE40_RS10480	0.39	-2.3
2,027,380	+		ABIE40_RS10480	0.40	+0.1
2,027,380	+		ABIE40_RS10480	0.40	+1.3
2,027,381	-		ABIE40_RS10480	0.40	-1.7
2,027,381	-		ABIE40_RS10480	0.40	-0.9
2,027,381	-		ABIE40_RS10480	0.40	+3.5
2,027,381	-		ABIE40_RS10480	0.40	+1.5
2,027,386	+		ABIE40_RS10480	0.41	+0.9
2,027,387	-		ABIE40_RS10480	0.41	-1.9
2,027,518	+		ABIE40_RS10480	0.48	-2.5
2,027,617	+		ABIE40_RS10480	0.53	+0.8
2,027,626	+		ABIE40_RS10480	0.53	-0.2
2,027,626	+		ABIE40_RS10480	0.53	+0.1
2,027,626	+		ABIE40_RS10480	0.53	-2.1
2,027,626	+		ABIE40_RS10480	0.53	-0.6
2,027,626	+		ABIE40_RS10480	0.53	-1.3
2,027,626	+		ABIE40_RS10480	0.53	+2.9
2,027,626	+		ABIE40_RS10480	0.53	+2.1
2,027,626	+		ABIE40_RS10480	0.53	+1.7
2,027,627	-		ABIE40_RS10480	0.53	-2.3
2,027,627	-		ABIE40_RS10480	0.53	-0.6
2,027,627	-		ABIE40_RS10480	0.53	+2.0
2,027,627	-		ABIE40_RS10480	0.53	-3.5
2,027,627	-		ABIE40_RS10480	0.53	-2.1
2,027,627	-		ABIE40_RS10480	0.53	-1.7
2,027,628	+		ABIE40_RS10480	0.53	-0.3
2,027,629	-		ABIE40_RS10480	0.53	-0.4
2,027,629	-		ABIE40_RS10480	0.53	+1.6
2,027,629	-		ABIE40_RS10480	0.53	-3.1
2,027,678	-		ABIE40_RS10480	0.56	-1.2
2,027,734	+		ABIE40_RS10480	0.59	-1.9
2,027,734	+		ABIE40_RS10480	0.59	-1.6
2,027,734	+		ABIE40_RS10480	0.59	-1.5
2,027,734	+		ABIE40_RS10480	0.59	+0.5
2,027,735	-		ABIE40_RS10480	0.59	-0.6
2,027,735	-		ABIE40_RS10480	0.59	+1.0
2,027,950	-		ABIE40_RS10480	0.70	+1.4
2,027,986	+		ABIE40_RS10480	0.72	-3.3
2,027,987	-		ABIE40_RS10480	0.72	-0.6
2,027,987	-		ABIE40_RS10480	0.72	+0.7
2,027,987	-		ABIE40_RS10480	0.72	-1.4
2,027,987	-		ABIE40_RS10480	0.72	-2.0
2,027,988	+		ABIE40_RS10480	0.72	-0.2
2,027,988	+		ABIE40_RS10480	0.72	-0.9
2,027,988	+		ABIE40_RS10480	0.72	-1.3
2,027,989	-		ABIE40_RS10480	0.72	+0.3
2,028,066	+		ABIE40_RS10480	0.76	+1.2
2,028,067	-		ABIE40_RS10480	0.76	+2.9
2,028,067	-		ABIE40_RS10480	0.76	+0.5
2,028,109	+		ABIE40_RS10480	0.78	-0.9
2,028,109	+		ABIE40_RS10480	0.78	+0.7
2,028,110	-		ABIE40_RS10480	0.78	-0.1
2,028,110	-		ABIE40_RS10480	0.78	-3.1
2,028,125	-		ABIE40_RS10480	0.79	+0.9
2,028,125	-		ABIE40_RS10480	0.79	-1.4
2,028,125	-		ABIE40_RS10480	0.79	+1.4
2,028,262	+		ABIE40_RS10480	0.86	-1.3
2,028,263	-		ABIE40_RS10480	0.86	-2.2
2,028,264	+		ABIE40_RS10480	0.86	-0.0
2,028,265	-		ABIE40_RS10480	0.86	-1.8
2,028,298	+		ABIE40_RS10480	0.88	+1.7
2,028,298	+		ABIE40_RS10480	0.88	-1.3
2,028,298	+		ABIE40_RS10480	0.88	+1.6
2,028,298	+		ABIE40_RS10480	0.88	-3.2
2,028,298	+		ABIE40_RS10480	0.88	+0.3
2,028,298	+		ABIE40_RS10480	0.88	+1.2
2,028,298	+		ABIE40_RS10480	0.88	-1.0
2,028,334	+		ABIE40_RS10480	0.90	+2.5
2,028,335	-		ABIE40_RS10480	0.90	+0.7
2,028,335	-		ABIE40_RS10480	0.90	+0.2
2,028,343	-				+0.6
2,028,433	+				-0.0
2,028,439	+				-1.9
2,028,439	+				+0.1
2,028,440	-				+1.7
2,028,440	-				-1.0
2,028,523	+				+0.8
2,028,523	+				+0.3
2,028,533	-				+0.4
2,028,533	-				-0.1
2,028,541	-				-1.0
2,028,589	+				-1.8
2,028,611	+				+1.0
2,028,611	+				-2.0
2,028,611	+				-1.6
2,028,611	+				-1.0
2,028,611	+				+0.5
2,028,611	+				-4.1
2,028,611	+				-0.4
2,028,611	+				-0.2
2,028,611	+				-3.8
2,028,611	+				-1.6
2,028,611	+				-1.3
2,028,612	-				+0.9
2,028,612	-				+1.1
2,028,612	-				+0.3
2,028,612	-				-1.7
2,028,612	-				-1.1
2,028,612	-				-0.2
2,028,612	-				+0.4
2,028,612	-				-0.9
2,028,612	-				+0.8
2,028,612	-				-0.4
2,028,613	+				-0.3
2,028,613	+				-1.6
2,028,613	+				-2.7
2,028,614	-				+0.3
2,028,614	-				+0.2
2,028,614	-				-0.5
2,028,614	-				+0.8
2,029,004	+		ABIE40_RS10485	0.74	-1.4
2,029,004	+		ABIE40_RS10485	0.74	-1.9
2,029,005	-		ABIE40_RS10485	0.74	-0.6
2,029,005	-		ABIE40_RS10485	0.74	+1.1
2,029,139	+				-1.7
2,029,139	+				-4.7
2,029,205	+		ABIE40_RS10490	0.17	+2.2
2,029,205	+		ABIE40_RS10490	0.17	+2.5
2,029,205	+		ABIE40_RS10490	0.17	-0.3
2,029,205	+		ABIE40_RS10490	0.17	+0.1
2,029,205	+		ABIE40_RS10490	0.17	-1.2
2,029,206	-		ABIE40_RS10490	0.17	+1.0
2,029,206	-		ABIE40_RS10490	0.17	-0.3
2,029,206	-		ABIE40_RS10490	0.17	-0.2
2,029,206	-		ABIE40_RS10490	0.17	-5.1
2,029,215	-		ABIE40_RS10490	0.19	-0.5
2,029,350	-		ABIE40_RS10490	0.54	-0.7
2,029,415	+		ABIE40_RS10490	0.70	+1.5
2,029,415	+		ABIE40_RS10490	0.70	+2.5
2,029,417	-		ABIE40_RS10490	0.70	+0.1
2,029,518	+				+0.6
2,029,519	-				+0.2
2,029,519	-				+1.3
2,029,519	-				-2.1
2,029,519	-				-3.0
2,029,519	-				-2.0
2,029,519	-				+0.6
2,029,519	-				-0.4
2,029,520	+				-0.9
2,029,520	+				+0.5
2,029,521	-				-2.2