Strain Fitness in Escherichia coli BW25113 around b2151

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmglB and galS are separated by 279 nucleotidesgalS and yeiB are separated by 141 nucleotides b2150: mglB - methyl-galactoside transporter subunit (NCBI), at 2,237,372 to 2,238,370 mglB b2151: galS - DNA-binding transcriptional repressor (NCBI), at 2,238,650 to 2,239,690 galS b2152: yeiB - conserved inner membrane protein (NCBI), at 2,239,832 to 2,240,989 yeiB Position (kb) 2238 2239 2240Strain fitness (log2 ratio) -1 0 1 2at 2237.897 kb on - strand, within mglBat 2237.901 kb on + strand, within mglBat 2237.927 kb on - strand, within mglBat 2237.989 kb on - strand, within mglBat 2238.223 kb on - strand, within mglBat 2238.269 kb on + strand, within mglBat 2238.309 kb on + strandat 2238.309 kb on + strandat 2238.488 kb on + strandat 2238.488 kb on + strandat 2238.602 kb on + strandat 2238.602 kb on + strandat 2238.647 kb on + strandat 2238.762 kb on - strand, within galSat 2238.762 kb on - strand, within galSat 2238.839 kb on - strand, within galSat 2238.857 kb on - strand, within galSat 2239.012 kb on + strand, within galSat 2239.042 kb on - strand, within galSat 2239.066 kb on + strand, within galSat 2239.098 kb on - strand, within galSat 2239.098 kb on - strand, within galSat 2239.112 kb on - strand, within galSat 2239.267 kb on - strand, within galSat 2239.394 kb on + strand, within galSat 2239.429 kb on - strand, within galSat 2239.429 kb on - strand, within galSat 2239.452 kb on + strand, within galSat 2239.532 kb on + strand, within galSat 2239.590 kb on - strandat 2239.590 kb on - strandat 2239.605 kb on - strandat 2239.605 kb on - strandat 2239.699 kb on - strandat 2239.752 kb on - strandat 2239.937 kb on + strandat 2239.953 kb on + strand, within yeiBat 2240.119 kb on - strand, within yeiBat 2240.217 kb on + strand, within yeiBat 2240.262 kb on - strand, within yeiBat 2240.313 kb on - strand, within yeiBat 2240.566 kb on + strand, within yeiBat 2240.566 kb on + strand, within yeiB

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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2,237,897 - mglB b2150 0.53 -0.5
2,237,901 + mglB b2150 0.53 -0.2
2,237,927 - mglB b2150 0.56 +0.1
2,237,989 - mglB b2150 0.62 -0.1
2,238,223 - mglB b2150 0.85 -0.4
2,238,269 + mglB b2150 0.90 +0.0
2,238,309 + +0.1
2,238,309 + -0.1
2,238,488 + -0.9
2,238,488 + -0.8
2,238,602 + -0.9
2,238,602 + +1.9
2,238,647 + -0.3
2,238,762 - galS b2151 0.11 -0.3
2,238,762 - galS b2151 0.11 +1.3
2,238,839 - galS b2151 0.18 +0.6
2,238,857 - galS b2151 0.20 -0.3
2,239,012 + galS b2151 0.35 -0.5
2,239,042 - galS b2151 0.38 +0.7
2,239,066 + galS b2151 0.40 -0.5
2,239,098 - galS b2151 0.43 +0.5
2,239,098 - galS b2151 0.43 -0.7
2,239,112 - galS b2151 0.44 +1.5
2,239,267 - galS b2151 0.59 -1.5
2,239,394 + galS b2151 0.71 +0.5
2,239,429 - galS b2151 0.75 +0.5
2,239,429 - galS b2151 0.75 -0.3
2,239,452 + galS b2151 0.77 +0.4
2,239,532 + galS b2151 0.85 -0.5
2,239,590 - +0.1
2,239,590 - +0.3
2,239,605 - +0.0
2,239,605 - -0.8
2,239,699 - -0.6
2,239,752 - -0.4
2,239,937 + +0.1
2,239,953 + yeiB b2152 0.10 -0.5
2,240,119 - yeiB b2152 0.25 +0.4
2,240,217 + yeiB b2152 0.33 +0.0
2,240,262 - yeiB b2152 0.37 +0.8
2,240,313 - yeiB b2152 0.42 -0.2
2,240,566 + yeiB b2152 0.63 -0.3
2,240,566 + yeiB b2152 0.63 -0.5

Or see this region's nucleotide sequence