Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS25025 and ABID97_RS25030 are separated by 252 nucleotides ABID97_RS25030 and ABID97_RS25035 are separated by 140 nucleotides ABID97_RS25035 and ABID97_RS25040 are separated by 76 nucleotides
ABID97_RS25025: ABID97_RS25025 - adenosylhomocysteinase, at 5,179,550 to 5,180,989
_RS25025
ABID97_RS25030: ABID97_RS25030 - hypothetical protein, at 5,181,242 to 5,181,874
_RS25030
ABID97_RS25035: ABID97_RS25035 - TIGR01841 family phasin, at 5,182,015 to 5,182,527
_RS25035
ABID97_RS25040: ABID97_RS25040 - peptide chain release factor 3, at 5,182,604 to 5,184,234
_RS25040
Position (kb)
5181
5182 Strain fitness (log2 ratio)
-1
0
1 at 5181.007 kb on + strand at 5181.008 kb on - strand at 5181.008 kb on - strand at 5181.008 kb on - strand at 5181.135 kb on - strand at 5181.135 kb on - strand at 5181.207 kb on + strand at 5181.207 kb on + strand at 5181.207 kb on + strand at 5181.207 kb on + strand at 5181.208 kb on - strand at 5181.208 kb on - strand at 5181.452 kb on + strand, within ABID97_RS25030 at 5181.453 kb on - strand, within ABID97_RS25030 at 5181.692 kb on + strand, within ABID97_RS25030 at 5181.693 kb on - strand, within ABID97_RS25030 at 5181.693 kb on - strand, within ABID97_RS25030 at 5181.872 kb on + strand at 5181.872 kb on + strand at 5181.872 kb on + strand at 5181.873 kb on - strand at 5181.938 kb on - strand at 5182.045 kb on - strand at 5182.249 kb on + strand, within ABID97_RS25035 at 5182.469 kb on + strand, within ABID97_RS25035 at 5182.469 kb on + strand, within ABID97_RS25035 at 5182.526 kb on - strand at 5182.526 kb on - strand at 5182.572 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 5,181,007 + +0.4 5,181,008 - +0.4 5,181,008 - -0.2 5,181,008 - +0.0 5,181,135 - -0.5 5,181,135 - +0.3 5,181,207 + -0.5 5,181,207 + +0.3 5,181,207 + +0.5 5,181,207 + +0.0 5,181,208 - -0.1 5,181,208 - +0.1 5,181,452 + ABID97_RS25030 0.33 -0.2 5,181,453 - ABID97_RS25030 0.33 +0.6 5,181,692 + ABID97_RS25030 0.71 +0.2 5,181,693 - ABID97_RS25030 0.71 +0.1 5,181,693 - ABID97_RS25030 0.71 +0.1 5,181,872 + -0.0 5,181,872 + +0.0 5,181,872 + +0.3 5,181,873 - -0.4 5,181,938 - -0.1 5,182,045 - +0.2 5,182,249 + ABID97_RS25035 0.46 +0.1 5,182,469 + ABID97_RS25035 0.88 -0.5 5,182,469 + ABID97_RS25035 0.88 +0.3 5,182,526 - -0.1 5,182,526 - +0.1 5,182,572 - +0.4
Or see this region's nucleotide sequence