Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS19960 and ABID97_RS19965 are separated by 370 nucleotides ABID97_RS19965 and ABID97_RS19970 are separated by 26 nucleotides ABID97_RS19970 and ABID97_RS19975 are separated by 13 nucleotides
ABID97_RS19960: ABID97_RS19960 - DeoR/GlpR family DNA-binding transcription regulator, at 4,120,923 to 4,121,690
_RS19960
ABID97_RS19965: ABID97_RS19965 - glycerol kinase GlpK, at 4,122,061 to 4,123,554
_RS19965
ABID97_RS19970: ABID97_RS19970 - hypothetical protein, at 4,123,581 to 4,124,225
_RS19970
ABID97_RS19975: ABID97_RS19975 - hypothetical protein, at 4,124,239 to 4,125,114
_RS19975
Position (kb)
4122
4123
4124 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 4122.067 kb on + strand at 4122.075 kb on - strand at 4122.844 kb on + strand, within ABID97_RS19965 at 4122.844 kb on + strand, within ABID97_RS19965 at 4122.844 kb on + strand, within ABID97_RS19965 at 4122.845 kb on - strand, within ABID97_RS19965 at 4122.845 kb on - strand, within ABID97_RS19965 at 4123.356 kb on - strand, within ABID97_RS19965 at 4123.424 kb on - strand at 4123.619 kb on - strand at 4123.619 kb on - strand at 4123.619 kb on - strand at 4123.694 kb on - strand, within ABID97_RS19970 at 4123.711 kb on + strand, within ABID97_RS19970 at 4123.762 kb on + strand, within ABID97_RS19970 at 4123.849 kb on + strand, within ABID97_RS19970 at 4123.850 kb on - strand, within ABID97_RS19970 at 4123.850 kb on - strand, within ABID97_RS19970 at 4123.931 kb on - strand, within ABID97_RS19970 at 4123.998 kb on - strand, within ABID97_RS19970 at 4124.051 kb on + strand, within ABID97_RS19970 at 4124.051 kb on + strand, within ABID97_RS19970 at 4124.051 kb on + strand, within ABID97_RS19970 at 4124.052 kb on - strand, within ABID97_RS19970 at 4124.052 kb on - strand, within ABID97_RS19970 at 4124.056 kb on - strand, within ABID97_RS19970 at 4124.074 kb on + strand at 4124.090 kb on - strand, within ABID97_RS19970 at 4124.113 kb on + strand, within ABID97_RS19970 at 4124.215 kb on + strand at 4124.339 kb on - strand, within ABID97_RS19975
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 4,122,067 + -4.0 4,122,075 - -4.9 4,122,844 + ABID97_RS19965 0.52 -3.1 4,122,844 + ABID97_RS19965 0.52 -1.9 4,122,844 + ABID97_RS19965 0.52 -5.0 4,122,845 - ABID97_RS19965 0.52 -4.0 4,122,845 - ABID97_RS19965 0.52 -6.2 4,123,356 - ABID97_RS19965 0.87 -5.8 4,123,424 - -5.6 4,123,619 - -2.0 4,123,619 - -1.0 4,123,619 - -0.7 4,123,694 - ABID97_RS19970 0.18 -0.4 4,123,711 + ABID97_RS19970 0.20 -0.4 4,123,762 + ABID97_RS19970 0.28 -0.0 4,123,849 + ABID97_RS19970 0.42 -0.3 4,123,850 - ABID97_RS19970 0.42 -0.3 4,123,850 - ABID97_RS19970 0.42 -0.6 4,123,931 - ABID97_RS19970 0.54 +0.3 4,123,998 - ABID97_RS19970 0.65 -0.0 4,124,051 + ABID97_RS19970 0.73 +0.1 4,124,051 + ABID97_RS19970 0.73 +0.2 4,124,051 + ABID97_RS19970 0.73 -0.4 4,124,052 - ABID97_RS19970 0.73 +1.3 4,124,052 - ABID97_RS19970 0.73 +0.2 4,124,056 - ABID97_RS19970 0.74 -0.1 4,124,074 + +1.7 4,124,090 - ABID97_RS19970 0.79 +0.4 4,124,113 + ABID97_RS19970 0.82 +0.0 4,124,215 + +0.2 4,124,339 - ABID97_RS19975 0.11 -0.1
Or see this region's nucleotide sequence