Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS16535 and ABID97_RS16540 are separated by 108 nucleotides ABID97_RS16540 and ABID97_RS16545 are separated by 23 nucleotides ABID97_RS16545 and ABID97_RS16550 are separated by 24 nucleotides
ABID97_RS16535: ABID97_RS16535 - arginine/lysine/ornithine decarboxylase, at 3,421,389 to 3,423,689
_RS16535
ABID97_RS16540: ABID97_RS16540 - NfeD family protein, at 3,423,798 to 3,424,223
_RS16540
ABID97_RS16545: ABID97_RS16545 - stomatin-like protein, at 3,424,247 to 3,425,176
_RS16545
ABID97_RS16550: ABID97_RS16550 - tRNA-Ser, at 3,425,201 to 3,425,291
_RS16550
Position (kb) 3423
3424
3425 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 3423.388 kb on + strand, within ABID97_RS16535 at 3423.388 kb on + strand, within ABID97_RS16535 at 3423.389 kb on - strand, within ABID97_RS16535 at 3423.395 kb on - strand, within ABID97_RS16535 at 3423.559 kb on + strand at 3423.560 kb on - strand at 3423.712 kb on + strand at 3423.713 kb on - strand at 3423.726 kb on + strand at 3423.726 kb on + strand at 3423.826 kb on + strand at 3423.870 kb on + strand, within ABID97_RS16540 at 3423.871 kb on - strand, within ABID97_RS16540 at 3423.990 kb on + strand, within ABID97_RS16540 at 3423.990 kb on + strand, within ABID97_RS16540 at 3423.990 kb on + strand, within ABID97_RS16540 at 3423.990 kb on + strand, within ABID97_RS16540 at 3423.991 kb on - strand, within ABID97_RS16540 at 3423.991 kb on - strand, within ABID97_RS16540 at 3423.991 kb on - strand, within ABID97_RS16540 at 3424.221 kb on + strand at 3424.221 kb on + strand at 3424.253 kb on + strand at 3424.358 kb on + strand, within ABID97_RS16545 at 3424.359 kb on - strand, within ABID97_RS16545 at 3424.359 kb on - strand, within ABID97_RS16545 at 3424.359 kb on - strand, within ABID97_RS16545 at 3424.418 kb on + strand, within ABID97_RS16545 at 3424.418 kb on + strand, within ABID97_RS16545 at 3424.418 kb on + strand, within ABID97_RS16545 at 3424.419 kb on - strand, within ABID97_RS16545 at 3424.511 kb on + strand, within ABID97_RS16545 at 3424.512 kb on - strand, within ABID97_RS16545 at 3424.545 kb on - strand, within ABID97_RS16545 at 3424.545 kb on - strand, within ABID97_RS16545 at 3424.559 kb on + strand, within ABID97_RS16545 at 3424.559 kb on + strand, within ABID97_RS16545 at 3424.559 kb on + strand, within ABID97_RS16545 at 3424.560 kb on - strand, within ABID97_RS16545 at 3424.560 kb on - strand, within ABID97_RS16545 at 3424.560 kb on - strand, within ABID97_RS16545 at 3424.560 kb on - strand, within ABID97_RS16545 at 3424.560 kb on - strand, within ABID97_RS16545 at 3424.560 kb on - strand, within ABID97_RS16545 at 3424.560 kb on - strand, within ABID97_RS16545 at 3424.560 kb on - strand, within ABID97_RS16545 at 3424.560 kb on - strand, within ABID97_RS16545 at 3424.560 kb on - strand, within ABID97_RS16545 at 3425.052 kb on - strand, within ABID97_RS16545
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 3,423,388 + ABID97_RS16535 0.87 -2.8 3,423,388 + ABID97_RS16535 0.87 -3.2 3,423,389 - ABID97_RS16535 0.87 -3.4 3,423,395 - ABID97_RS16535 0.87 -2.1 3,423,559 + -2.2 3,423,560 - -2.1 3,423,712 + -1.2 3,423,713 - -0.0 3,423,726 + +0.3 3,423,726 + +0.3 3,423,826 + +0.1 3,423,870 + ABID97_RS16540 0.17 +0.7 3,423,871 - ABID97_RS16540 0.17 +0.1 3,423,990 + ABID97_RS16540 0.45 +0.2 3,423,990 + ABID97_RS16540 0.45 -0.3 3,423,990 + ABID97_RS16540 0.45 -0.5 3,423,990 + ABID97_RS16540 0.45 +0.5 3,423,991 - ABID97_RS16540 0.45 +0.2 3,423,991 - ABID97_RS16540 0.45 +0.2 3,423,991 - ABID97_RS16540 0.45 +0.2 3,424,221 + -0.6 3,424,221 + +0.3 3,424,253 + -0.3 3,424,358 + ABID97_RS16545 0.12 -0.4 3,424,359 - ABID97_RS16545 0.12 +0.5 3,424,359 - ABID97_RS16545 0.12 +0.1 3,424,359 - ABID97_RS16545 0.12 +0.3 3,424,418 + ABID97_RS16545 0.18 -0.8 3,424,418 + ABID97_RS16545 0.18 +0.2 3,424,418 + ABID97_RS16545 0.18 +0.0 3,424,419 - ABID97_RS16545 0.18 -0.4 3,424,511 + ABID97_RS16545 0.28 -0.3 3,424,512 - ABID97_RS16545 0.28 +1.0 3,424,545 - ABID97_RS16545 0.32 +0.1 3,424,545 - ABID97_RS16545 0.32 +0.2 3,424,559 + ABID97_RS16545 0.34 +0.0 3,424,559 + ABID97_RS16545 0.34 -0.5 3,424,559 + ABID97_RS16545 0.34 -0.1 3,424,560 - ABID97_RS16545 0.34 -0.1 3,424,560 - ABID97_RS16545 0.34 -0.6 3,424,560 - ABID97_RS16545 0.34 +0.2 3,424,560 - ABID97_RS16545 0.34 +1.0 3,424,560 - ABID97_RS16545 0.34 +0.2 3,424,560 - ABID97_RS16545 0.34 +0.7 3,424,560 - ABID97_RS16545 0.34 -0.4 3,424,560 - ABID97_RS16545 0.34 -0.2 3,424,560 - ABID97_RS16545 0.34 -0.1 3,424,560 - ABID97_RS16545 0.34 +0.5 3,425,052 - ABID97_RS16545 0.87 -0.0
Or see this region's nucleotide sequence