Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS16145 and ABID97_RS16150 are separated by 72 nucleotides ABID97_RS16150 and ABID97_RS16155 are separated by 189 nucleotides ABID97_RS16155 and ABID97_RS16160 are separated by 45 nucleotides
ABID97_RS16145: ABID97_RS16145 - universal stress protein, at 3,343,145 to 3,343,567
_RS16145
ABID97_RS16150: ABID97_RS16150 - hemerythrin domain-containing protein, at 3,343,640 to 3,344,224
_RS16150
ABID97_RS16155: ABID97_RS16155 - universal stress protein, at 3,344,414 to 3,344,923
_RS16155
ABID97_RS16160: ABID97_RS16160 - fatty acid desaturase, at 3,344,969 to 3,346,153
_RS16160
Position (kb)
3344
3345 Strain fitness (log2 ratio)
-2
-1
0
1 at 3343.513 kb on - strand, within ABID97_RS16145 at 3343.533 kb on + strand at 3343.848 kb on + strand, within ABID97_RS16150 at 3343.849 kb on - strand, within ABID97_RS16150 at 3343.861 kb on - strand, within ABID97_RS16150 at 3343.861 kb on - strand, within ABID97_RS16150 at 3344.082 kb on + strand, within ABID97_RS16150 at 3344.083 kb on - strand, within ABID97_RS16150 at 3344.417 kb on + strand at 3344.417 kb on + strand at 3344.418 kb on - strand at 3344.418 kb on - strand at 3344.564 kb on + strand, within ABID97_RS16155 at 3344.565 kb on - strand, within ABID97_RS16155 at 3344.565 kb on - strand, within ABID97_RS16155 at 3344.565 kb on - strand, within ABID97_RS16155 at 3344.976 kb on + strand at 3344.976 kb on + strand at 3344.976 kb on + strand at 3345.016 kb on + strand at 3345.309 kb on + strand, within ABID97_RS16160 at 3345.310 kb on - strand, within ABID97_RS16160 at 3345.475 kb on - strand, within ABID97_RS16160 at 3345.475 kb on - strand, within ABID97_RS16160 at 3345.609 kb on + strand, within ABID97_RS16160 at 3345.756 kb on + strand, within ABID97_RS16160 at 3345.837 kb on + strand, within ABID97_RS16160
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 3,343,513 - ABID97_RS16145 0.87 -0.4 3,343,533 + +0.6 3,343,848 + ABID97_RS16150 0.36 +0.2 3,343,849 - ABID97_RS16150 0.36 -0.0 3,343,861 - ABID97_RS16150 0.38 -1.2 3,343,861 - ABID97_RS16150 0.38 +0.2 3,344,082 + ABID97_RS16150 0.76 -0.7 3,344,083 - ABID97_RS16150 0.76 -0.5 3,344,417 + -0.3 3,344,417 + -1.2 3,344,418 - -0.7 3,344,418 - -0.2 3,344,564 + ABID97_RS16155 0.29 +0.3 3,344,565 - ABID97_RS16155 0.30 +0.4 3,344,565 - ABID97_RS16155 0.30 -2.7 3,344,565 - ABID97_RS16155 0.30 +0.8 3,344,976 + +0.4 3,344,976 + -1.6 3,344,976 + +1.6 3,345,016 + -0.4 3,345,309 + ABID97_RS16160 0.29 -0.2 3,345,310 - ABID97_RS16160 0.29 -0.7 3,345,475 - ABID97_RS16160 0.43 +0.1 3,345,475 - ABID97_RS16160 0.43 -1.7 3,345,609 + ABID97_RS16160 0.54 +0.2 3,345,756 + ABID97_RS16160 0.66 -0.3 3,345,837 + ABID97_RS16160 0.73 -0.2
Or see this region's nucleotide sequence