Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS28555 and ABID97_RS28560 are separated by 331 nucleotides ABID97_RS28560 and ABID97_RS28565 are separated by 42 nucleotides ABID97_RS28565 and ABID97_RS28570 are separated by 20 nucleotides
ABID97_RS28555: ABID97_RS28555 - methyltransferase domain-containing protein, at 630,168 to 630,980
_RS28555
ABID97_RS28560: ABID97_RS28560 - aldehyde dehydrogenase family protein, at 631,312 to 632,793
_RS28560
ABID97_RS28565: ABID97_RS28565 - cupin domain-containing protein, at 632,836 to 633,555
_RS28565
ABID97_RS28570: ABID97_RS28570 - FAD-binding oxidoreductase, at 633,576 to 634,901
_RS28570
Position (kb) 631
632
633 Strain fitness (log2 ratio) -1
0
1 at 630.464 kb on - strand, within ABID97_RS28555 at 630.758 kb on - strand, within ABID97_RS28555 at 630.934 kb on + strand at 630.935 kb on - strand at 631.033 kb on + strand at 631.034 kb on - strand at 631.034 kb on - strand at 631.034 kb on - strand at 632.853 kb on - strand at 633.013 kb on + strand, within ABID97_RS28565 at 633.399 kb on + strand, within ABID97_RS28565
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 630,464 - ABID97_RS28555 0.36 +0.9 630,758 - ABID97_RS28555 0.73 -0.2 630,934 + +0.5 630,935 - -0.2 631,033 + +0.1 631,034 - -0.0 631,034 - -0.1 631,034 - -0.0 632,853 - -0.7 633,013 + ABID97_RS28565 0.25 -0.7 633,399 + ABID97_RS28565 0.78 -0.3
Or see this region's nucleotide sequence