Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS15465 and ABID97_RS15470 are separated by 18 nucleotides ABID97_RS15470 and ABID97_RS15475 are separated by 102 nucleotides ABID97_RS15475 and ABID97_RS15480 are separated by 12 nucleotides ABID97_RS15480 and ABID97_RS15485 overlap by 1 nucleotides ABID97_RS15485 and ABID97_RS15490 are separated by 32 nucleotides
ABID97_RS15465: ABID97_RS15465 - sulfate ABC transporter substrate-binding protein, at 3,201,163 to 3,202,188
_RS15465
ABID97_RS15470: ABID97_RS15470 - NADPH-dependent FMN reductase, at 3,202,207 to 3,202,791
_RS15470
ABID97_RS15475: ABID97_RS15475 - hypothetical protein, at 3,202,894 to 3,203,028
_RS15475
ABID97_RS15480: ABID97_RS15480 - sulfonate ABC transporter substrate-binding protein, at 3,203,041 to 3,203,997
_RS15480
ABID97_RS15485: ABID97_RS15485 - hypothetical protein, at 3,203,997 to 3,204,146
_RS15485
ABID97_RS15490: ABID97_RS15490 - FMNH2-dependent alkanesulfonate monooxygenase, at 3,204,179 to 3,205,348
_RS15490
Position (kb) 3203
3204 Strain fitness (log2 ratio) -1
0
1 at 3202.069 kb on + strand, within ABID97_RS15465 at 3202.069 kb on + strand, within ABID97_RS15465 at 3202.180 kb on + strand at 3202.180 kb on + strand at 3202.180 kb on + strand at 3202.180 kb on + strand at 3202.181 kb on - strand at 3202.186 kb on + strand at 3202.562 kb on - strand, within ABID97_RS15470 at 3202.618 kb on + strand, within ABID97_RS15470 at 3202.782 kb on + strand at 3202.782 kb on + strand at 3202.782 kb on + strand at 3202.783 kb on - strand at 3203.357 kb on - strand, within ABID97_RS15480 at 3203.483 kb on - strand, within ABID97_RS15480 at 3203.522 kb on - strand, within ABID97_RS15480 at 3203.689 kb on + strand, within ABID97_RS15480 at 3203.692 kb on + strand, within ABID97_RS15480 at 3203.692 kb on + strand, within ABID97_RS15480 at 3203.693 kb on - strand, within ABID97_RS15480 at 3203.929 kb on + strand at 3204.187 kb on - strand at 3204.264 kb on - strand at 3204.537 kb on - strand, within ABID97_RS15490 at 3204.558 kb on - strand, within ABID97_RS15490 at 3204.674 kb on + strand, within ABID97_RS15490 at 3204.764 kb on + strand, within ABID97_RS15490 at 3204.765 kb on - strand, within ABID97_RS15490 at 3204.765 kb on - strand, within ABID97_RS15490 at 3204.765 kb on - strand, within ABID97_RS15490
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 3,202,069 + ABID97_RS15465 0.88 +0.9 3,202,069 + ABID97_RS15465 0.88 +0.8 3,202,180 + -1.2 3,202,180 + +0.1 3,202,180 + +0.4 3,202,180 + -0.2 3,202,181 - +0.3 3,202,186 + +0.1 3,202,562 - ABID97_RS15470 0.61 +0.5 3,202,618 + ABID97_RS15470 0.70 +0.1 3,202,782 + +0.3 3,202,782 + +0.8 3,202,782 + -0.2 3,202,783 - +0.2 3,203,357 - ABID97_RS15480 0.33 -1.1 3,203,483 - ABID97_RS15480 0.46 +0.2 3,203,522 - ABID97_RS15480 0.50 +0.0 3,203,689 + ABID97_RS15480 0.68 +0.5 3,203,692 + ABID97_RS15480 0.68 -1.7 3,203,692 + ABID97_RS15480 0.68 +0.6 3,203,693 - ABID97_RS15480 0.68 +0.1 3,203,929 + -0.8 3,204,187 - -0.4 3,204,264 - -0.8 3,204,537 - ABID97_RS15490 0.31 -0.5 3,204,558 - ABID97_RS15490 0.32 +0.3 3,204,674 + ABID97_RS15490 0.42 +1.5 3,204,764 + ABID97_RS15490 0.50 +0.5 3,204,765 - ABID97_RS15490 0.50 -0.0 3,204,765 - ABID97_RS15490 0.50 -0.2 3,204,765 - ABID97_RS15490 0.50 +0.6
Or see this region's nucleotide sequence