Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS11685 and ABID97_RS11690 are separated by 23 nucleotides ABID97_RS11690 and ABID97_RS11695 are separated by 4 nucleotides
ABID97_RS11685: ABID97_RS11685 - M20/M25/M40 family metallo-hydrolase, at 2,413,988 to 2,415,205
_RS11685
ABID97_RS11690: ABID97_RS11690 - hydantoinase B/oxoprolinase family protein, at 2,415,229 to 2,418,876
_RS11690
ABID97_RS11695: ABID97_RS11695 - IS481 family transposase, at 2,418,881 to 2,419,831
_RS11695
Position (kb)
2415
2416
2417
2418
2419 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2414.349 kb on - strand, within ABID97_RS11685 at 2414.796 kb on - strand, within ABID97_RS11685 at 2415.108 kb on - strand at 2415.168 kb on - strand at 2415.234 kb on + strand at 2415.309 kb on + strand at 2415.625 kb on + strand, within ABID97_RS11690 at 2416.145 kb on - strand, within ABID97_RS11690 at 2417.632 kb on + strand, within ABID97_RS11690 at 2417.959 kb on + strand, within ABID97_RS11690 at 2417.960 kb on - strand, within ABID97_RS11690 at 2418.185 kb on - strand, within ABID97_RS11690 at 2418.185 kb on - strand, within ABID97_RS11690 at 2418.185 kb on - strand, within ABID97_RS11690 at 2418.185 kb on - strand, within ABID97_RS11690 at 2418.415 kb on + strand, within ABID97_RS11690 at 2418.416 kb on - strand, within ABID97_RS11690 at 2418.422 kb on - strand, within ABID97_RS11690 at 2418.753 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 2,414,349 - ABID97_RS11685 0.30 -0.2 2,414,796 - ABID97_RS11685 0.66 +2.1 2,415,108 - -0.1 2,415,168 - -0.6 2,415,234 + +0.8 2,415,309 + +0.3 2,415,625 + ABID97_RS11690 0.11 -0.5 2,416,145 - ABID97_RS11690 0.25 -0.6 2,417,632 + ABID97_RS11690 0.66 -1.1 2,417,959 + ABID97_RS11690 0.75 -0.0 2,417,960 - ABID97_RS11690 0.75 -2.3 2,418,185 - ABID97_RS11690 0.81 +1.6 2,418,185 - ABID97_RS11690 0.81 -0.7 2,418,185 - ABID97_RS11690 0.81 -0.0 2,418,185 - ABID97_RS11690 0.81 -0.7 2,418,415 + ABID97_RS11690 0.87 -0.1 2,418,416 - ABID97_RS11690 0.87 +1.1 2,418,422 - ABID97_RS11690 0.88 +0.5 2,418,753 - -0.7
Or see this region's nucleotide sequence