Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS01880 and ABID97_RS01885 overlap by 17 nucleotides ABID97_RS01885 and ABID97_RS01890 overlap by 11 nucleotides ABID97_RS01890 and ABID97_RS01895 are separated by 102 nucleotides
ABID97_RS01880: ABID97_RS01880 - ABC transporter ATP-binding protein, at 372,302 to 373,096
_RS01880
ABID97_RS01885: ABID97_RS01885 - ABC transporter permease, at 373,080 to 373,970
_RS01885
ABID97_RS01890: ABID97_RS01890 - FAD-binding oxidoreductase, at 373,960 to 375,339
_RS01890
ABID97_RS01895: ABID97_RS01895 - ABC transporter substrate-binding protein, at 375,442 to 376,470
_RS01895
Position (kb) 373
374
375
376 Strain fitness (log2 ratio) -2
-1
0
1 at 373.284 kb on + strand, within ABID97_RS01885 at 373.284 kb on + strand, within ABID97_RS01885 at 373.285 kb on - strand, within ABID97_RS01885 at 373.285 kb on - strand, within ABID97_RS01885 at 373.285 kb on - strand, within ABID97_RS01885 at 373.524 kb on + strand, within ABID97_RS01885 at 373.524 kb on + strand, within ABID97_RS01885 at 373.524 kb on + strand, within ABID97_RS01885 at 373.525 kb on - strand, within ABID97_RS01885 at 373.525 kb on - strand, within ABID97_RS01885 at 373.525 kb on - strand, within ABID97_RS01885 at 373.525 kb on - strand, within ABID97_RS01885 at 373.650 kb on + strand, within ABID97_RS01885 at 373.969 kb on - strand at 374.075 kb on - strand at 374.075 kb on - strand at 374.228 kb on - strand, within ABID97_RS01890 at 374.662 kb on + strand, within ABID97_RS01890 at 374.663 kb on - strand, within ABID97_RS01890 at 374.755 kb on + strand, within ABID97_RS01890 at 374.755 kb on + strand, within ABID97_RS01890 at 374.755 kb on + strand, within ABID97_RS01890 at 374.980 kb on + strand, within ABID97_RS01890 at 374.995 kb on + strand, within ABID97_RS01890 at 374.996 kb on - strand, within ABID97_RS01890 at 375.145 kb on + strand, within ABID97_RS01890 at 375.601 kb on + strand, within ABID97_RS01895 at 375.610 kb on + strand, within ABID97_RS01895 at 375.931 kb on + strand, within ABID97_RS01895 at 375.931 kb on + strand, within ABID97_RS01895 at 375.986 kb on - strand, within ABID97_RS01895 at 375.986 kb on - strand, within ABID97_RS01895 at 376.072 kb on + strand, within ABID97_RS01895 at 376.072 kb on + strand, within ABID97_RS01895 at 376.073 kb on - strand, within ABID97_RS01895 at 376.073 kb on - strand, within ABID97_RS01895 at 376.073 kb on - strand, within ABID97_RS01895 at 376.168 kb on + strand, within ABID97_RS01895 at 376.168 kb on + strand, within ABID97_RS01895 at 376.168 kb on + strand, within ABID97_RS01895 at 376.168 kb on + strand, within ABID97_RS01895 at 376.169 kb on - strand, within ABID97_RS01895 at 376.169 kb on - strand, within ABID97_RS01895 at 376.169 kb on - strand, within ABID97_RS01895 at 376.174 kb on + strand, within ABID97_RS01895
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 373,284 + ABID97_RS01885 0.23 -0.1 373,284 + ABID97_RS01885 0.23 -0.2 373,285 - ABID97_RS01885 0.23 +0.2 373,285 - ABID97_RS01885 0.23 +0.4 373,285 - ABID97_RS01885 0.23 -0.4 373,524 + ABID97_RS01885 0.50 -0.3 373,524 + ABID97_RS01885 0.50 -0.0 373,524 + ABID97_RS01885 0.50 +0.0 373,525 - ABID97_RS01885 0.50 +0.5 373,525 - ABID97_RS01885 0.50 -0.6 373,525 - ABID97_RS01885 0.50 -1.3 373,525 - ABID97_RS01885 0.50 -0.1 373,650 + ABID97_RS01885 0.64 -0.5 373,969 - -0.2 374,075 - +0.7 374,075 - +0.3 374,228 - ABID97_RS01890 0.19 -0.6 374,662 + ABID97_RS01890 0.51 +0.2 374,663 - ABID97_RS01890 0.51 -2.4 374,755 + ABID97_RS01890 0.58 -0.6 374,755 + ABID97_RS01890 0.58 -0.2 374,755 + ABID97_RS01890 0.58 -0.6 374,980 + ABID97_RS01890 0.74 -0.5 374,995 + ABID97_RS01890 0.75 -0.0 374,996 - ABID97_RS01890 0.75 -0.0 375,145 + ABID97_RS01890 0.86 -0.3 375,601 + ABID97_RS01895 0.15 -0.1 375,610 + ABID97_RS01895 0.16 -0.0 375,931 + ABID97_RS01895 0.48 +0.0 375,931 + ABID97_RS01895 0.48 -1.1 375,986 - ABID97_RS01895 0.53 +0.7 375,986 - ABID97_RS01895 0.53 +1.2 376,072 + ABID97_RS01895 0.61 -0.0 376,072 + ABID97_RS01895 0.61 -0.1 376,073 - ABID97_RS01895 0.61 +0.1 376,073 - ABID97_RS01895 0.61 +0.2 376,073 - ABID97_RS01895 0.61 -0.1 376,168 + ABID97_RS01895 0.71 +0.3 376,168 + ABID97_RS01895 0.71 +0.4 376,168 + ABID97_RS01895 0.71 -1.3 376,168 + ABID97_RS01895 0.71 -0.1 376,169 - ABID97_RS01895 0.71 +0.1 376,169 - ABID97_RS01895 0.71 -0.2 376,169 - ABID97_RS01895 0.71 +0.1 376,174 + ABID97_RS01895 0.71 +0.1
Or see this region's nucleotide sequence