Experiment: m.b. perchlorate 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4463 and Echvi_4464 are separated by 2 nucleotides Echvi_4464 and Echvi_4465 are separated by 248 nucleotides Echvi_4465 and Echvi_4466 are separated by 57 nucleotides Echvi_4466 and Echvi_4467 are separated by 50 nucleotides Echvi_4467 and Echvi_4468 are separated by 135 nucleotides
Echvi_4463: Echvi_4463 - cation diffusion facilitator family transporter, at 5,339,112 to 5,340,047
_4463
Echvi_4464: Echvi_4464 - hypothetical protein, at 5,340,050 to 5,340,298
_4464
Echvi_4465: Echvi_4465 - hypothetical protein, at 5,340,547 to 5,340,909
_4465
Echvi_4466: Echvi_4466 - Co/Zn/Cd efflux system component, at 5,340,967 to 5,341,764
_4466
Echvi_4467: Echvi_4467 - Uncharacterized conserved protein, at 5,341,815 to 5,342,201
_4467
Echvi_4468: Echvi_4468 - heavy metal translocating P-type ATPase, at 5,342,337 to 5,344,838
_4468
Position (kb) 5340
5341
5342 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5340.018 kb on - strand at 5340.018 kb on - strand at 5340.089 kb on + strand, within Echvi_4464 at 5340.090 kb on - strand, within Echvi_4464 at 5340.111 kb on - strand, within Echvi_4464 at 5340.111 kb on - strand, within Echvi_4464 at 5340.158 kb on + strand, within Echvi_4464 at 5340.159 kb on - strand, within Echvi_4464 at 5340.159 kb on - strand, within Echvi_4464 at 5340.219 kb on + strand, within Echvi_4464 at 5340.219 kb on + strand, within Echvi_4464 at 5340.252 kb on + strand, within Echvi_4464 at 5340.253 kb on - strand, within Echvi_4464 at 5340.256 kb on + strand, within Echvi_4464 at 5340.257 kb on - strand, within Echvi_4464 at 5340.270 kb on + strand, within Echvi_4464 at 5340.271 kb on - strand, within Echvi_4464 at 5340.271 kb on - strand, within Echvi_4464 at 5340.271 kb on - strand, within Echvi_4464 at 5340.276 kb on + strand at 5340.276 kb on + strand at 5340.311 kb on + strand at 5340.323 kb on + strand at 5340.333 kb on + strand at 5340.355 kb on + strand at 5340.355 kb on + strand at 5340.355 kb on + strand at 5340.355 kb on + strand at 5340.356 kb on - strand at 5340.356 kb on - strand at 5340.356 kb on - strand at 5340.356 kb on - strand at 5340.368 kb on - strand at 5340.538 kb on + strand at 5340.601 kb on + strand, within Echvi_4465 at 5340.636 kb on + strand, within Echvi_4465 at 5340.637 kb on - strand, within Echvi_4465 at 5340.725 kb on + strand, within Echvi_4465 at 5340.726 kb on - strand, within Echvi_4465 at 5340.726 kb on - strand, within Echvi_4465 at 5340.726 kb on - strand, within Echvi_4465 at 5340.727 kb on + strand, within Echvi_4465 at 5340.728 kb on - strand, within Echvi_4465 at 5340.771 kb on - strand, within Echvi_4465 at 5340.771 kb on - strand, within Echvi_4465 at 5340.850 kb on - strand, within Echvi_4465 at 5340.915 kb on + strand at 5340.922 kb on + strand at 5340.943 kb on + strand at 5340.943 kb on + strand at 5340.947 kb on + strand at 5340.948 kb on - strand at 5340.950 kb on + strand at 5340.950 kb on + strand at 5340.950 kb on + strand at 5340.950 kb on + strand at 5340.950 kb on + strand at 5340.952 kb on + strand at 5340.952 kb on + strand at 5340.989 kb on - strand at 5340.995 kb on - strand at 5341.068 kb on - strand, within Echvi_4466 at 5341.068 kb on - strand, within Echvi_4466 at 5341.102 kb on + strand, within Echvi_4466 at 5341.102 kb on + strand, within Echvi_4466 at 5341.106 kb on - strand, within Echvi_4466 at 5341.106 kb on - strand, within Echvi_4466 at 5341.270 kb on + strand, within Echvi_4466 at 5341.271 kb on - strand, within Echvi_4466 at 5341.388 kb on - strand, within Echvi_4466 at 5341.404 kb on + strand, within Echvi_4466 at 5341.405 kb on - strand, within Echvi_4466 at 5341.431 kb on + strand, within Echvi_4466 at 5341.462 kb on + strand, within Echvi_4466 at 5341.462 kb on + strand, within Echvi_4466 at 5341.521 kb on + strand, within Echvi_4466 at 5341.530 kb on + strand, within Echvi_4466 at 5341.531 kb on - strand, within Echvi_4466 at 5341.531 kb on - strand, within Echvi_4466 at 5341.533 kb on + strand, within Echvi_4466 at 5341.533 kb on + strand, within Echvi_4466 at 5341.534 kb on - strand, within Echvi_4466 at 5341.540 kb on + strand, within Echvi_4466 at 5341.541 kb on - strand, within Echvi_4466 at 5341.541 kb on - strand, within Echvi_4466 at 5341.594 kb on + strand, within Echvi_4466 at 5341.597 kb on - strand, within Echvi_4466 at 5341.631 kb on + strand, within Echvi_4466 at 5341.631 kb on + strand, within Echvi_4466 at 5341.631 kb on + strand, within Echvi_4466 at 5341.631 kb on + strand, within Echvi_4466 at 5341.651 kb on - strand, within Echvi_4466 at 5341.651 kb on - strand, within Echvi_4466 at 5341.683 kb on + strand, within Echvi_4466 at 5341.767 kb on + strand at 5341.768 kb on - strand at 5341.803 kb on - strand at 5341.819 kb on - strand at 5341.880 kb on + strand, within Echvi_4467 at 5341.881 kb on - strand, within Echvi_4467 at 5341.898 kb on + strand, within Echvi_4467 at 5341.898 kb on + strand, within Echvi_4467 at 5341.898 kb on + strand, within Echvi_4467 at 5341.899 kb on - strand, within Echvi_4467 at 5341.924 kb on - strand, within Echvi_4467 at 5341.924 kb on - strand, within Echvi_4467 at 5341.956 kb on + strand, within Echvi_4467 at 5341.956 kb on + strand, within Echvi_4467 at 5341.956 kb on + strand, within Echvi_4467 at 5341.956 kb on + strand, within Echvi_4467 at 5341.957 kb on - strand, within Echvi_4467 at 5341.986 kb on - strand, within Echvi_4467 at 5342.024 kb on + strand, within Echvi_4467 at 5342.024 kb on + strand, within Echvi_4467 at 5342.024 kb on + strand, within Echvi_4467 at 5342.024 kb on + strand, within Echvi_4467 at 5342.089 kb on - strand, within Echvi_4467 at 5342.102 kb on + strand, within Echvi_4467 at 5342.168 kb on + strand at 5342.169 kb on - strand at 5342.194 kb on + strand at 5342.194 kb on + strand at 5342.194 kb on + strand at 5342.195 kb on - strand at 5342.195 kb on - strand at 5342.235 kb on + strand at 5342.238 kb on - strand at 5342.238 kb on - strand at 5342.266 kb on + strand at 5342.267 kb on - strand at 5342.272 kb on + strand at 5342.314 kb on + strand at 5342.314 kb on + strand at 5342.314 kb on + strand at 5342.347 kb on + strand at 5342.373 kb on + strand at 5342.374 kb on - strand at 5342.376 kb on + strand at 5342.376 kb on + strand at 5342.377 kb on - strand at 5342.380 kb on - strand at 5342.388 kb on - strand at 5342.406 kb on + strand at 5342.418 kb on + strand at 5342.430 kb on - strand at 5342.456 kb on + strand at 5342.475 kb on + strand at 5342.499 kb on - strand at 5342.504 kb on + strand at 5342.624 kb on + strand, within Echvi_4468 at 5342.624 kb on + strand, within Echvi_4468 at 5342.627 kb on + strand, within Echvi_4468 at 5342.652 kb on + strand, within Echvi_4468 at 5342.652 kb on + strand, within Echvi_4468
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 25 mM remove 5,340,018 - +0.9 5,340,018 - -1.3 5,340,089 + Echvi_4464 0.16 -0.5 5,340,090 - Echvi_4464 0.16 +0.3 5,340,111 - Echvi_4464 0.24 +0.3 5,340,111 - Echvi_4464 0.24 -0.4 5,340,158 + Echvi_4464 0.43 +0.1 5,340,159 - Echvi_4464 0.44 +1.2 5,340,159 - Echvi_4464 0.44 -0.3 5,340,219 + Echvi_4464 0.68 +1.5 5,340,219 + Echvi_4464 0.68 -1.5 5,340,252 + Echvi_4464 0.81 +1.2 5,340,253 - Echvi_4464 0.82 +0.7 5,340,256 + Echvi_4464 0.83 +0.6 5,340,257 - Echvi_4464 0.83 +0.7 5,340,270 + Echvi_4464 0.88 +0.6 5,340,271 - Echvi_4464 0.89 +0.2 5,340,271 - Echvi_4464 0.89 -0.7 5,340,271 - Echvi_4464 0.89 +0.3 5,340,276 + -0.1 5,340,276 + -0.0 5,340,311 + +0.5 5,340,323 + -0.6 5,340,333 + -0.3 5,340,355 + -1.1 5,340,355 + +1.0 5,340,355 + -0.1 5,340,355 + +0.1 5,340,356 - +0.2 5,340,356 - -1.2 5,340,356 - -0.1 5,340,356 - +0.2 5,340,368 - -0.8 5,340,538 + +1.1 5,340,601 + Echvi_4465 0.15 -0.5 5,340,636 + Echvi_4465 0.25 -0.6 5,340,637 - Echvi_4465 0.25 -0.0 5,340,725 + Echvi_4465 0.49 -0.0 5,340,726 - Echvi_4465 0.49 +0.1 5,340,726 - Echvi_4465 0.49 +0.5 5,340,726 - Echvi_4465 0.49 +1.8 5,340,727 + Echvi_4465 0.50 +0.1 5,340,728 - Echvi_4465 0.50 +0.1 5,340,771 - Echvi_4465 0.62 -1.0 5,340,771 - Echvi_4465 0.62 -0.6 5,340,850 - Echvi_4465 0.83 -1.8 5,340,915 + +0.3 5,340,922 + -1.2 5,340,943 + -0.4 5,340,943 + +0.3 5,340,947 + -0.0 5,340,948 - +1.1 5,340,950 + +0.1 5,340,950 + -0.4 5,340,950 + +0.8 5,340,950 + -2.3 5,340,950 + -1.6 5,340,952 + +1.0 5,340,952 + +0.3 5,340,989 - +0.6 5,340,995 - +0.1 5,341,068 - Echvi_4466 0.13 +0.5 5,341,068 - Echvi_4466 0.13 +1.0 5,341,102 + Echvi_4466 0.17 +0.9 5,341,102 + Echvi_4466 0.17 +0.5 5,341,106 - Echvi_4466 0.17 +0.1 5,341,106 - Echvi_4466 0.17 +1.1 5,341,270 + Echvi_4466 0.38 -0.7 5,341,271 - Echvi_4466 0.38 +1.0 5,341,388 - Echvi_4466 0.53 +0.9 5,341,404 + Echvi_4466 0.55 +0.9 5,341,405 - Echvi_4466 0.55 +0.4 5,341,431 + Echvi_4466 0.58 +0.6 5,341,462 + Echvi_4466 0.62 -0.2 5,341,462 + Echvi_4466 0.62 -0.3 5,341,521 + Echvi_4466 0.69 +0.7 5,341,530 + Echvi_4466 0.71 +0.3 5,341,531 - Echvi_4466 0.71 +0.1 5,341,531 - Echvi_4466 0.71 +1.5 5,341,533 + Echvi_4466 0.71 -1.5 5,341,533 + Echvi_4466 0.71 +1.3 5,341,534 - Echvi_4466 0.71 +0.5 5,341,540 + Echvi_4466 0.72 +0.2 5,341,541 - Echvi_4466 0.72 +0.7 5,341,541 - Echvi_4466 0.72 +0.2 5,341,594 + Echvi_4466 0.79 +0.0 5,341,597 - Echvi_4466 0.79 -0.4 5,341,631 + Echvi_4466 0.83 +2.7 5,341,631 + Echvi_4466 0.83 +0.3 5,341,631 + Echvi_4466 0.83 +0.2 5,341,631 + Echvi_4466 0.83 -1.0 5,341,651 - Echvi_4466 0.86 +0.0 5,341,651 - Echvi_4466 0.86 +1.1 5,341,683 + Echvi_4466 0.90 -0.2 5,341,767 + -0.3 5,341,768 - -0.2 5,341,803 - -1.2 5,341,819 - +0.5 5,341,880 + Echvi_4467 0.17 +1.1 5,341,881 - Echvi_4467 0.17 +0.0 5,341,898 + Echvi_4467 0.21 +0.7 5,341,898 + Echvi_4467 0.21 +0.9 5,341,898 + Echvi_4467 0.21 -0.6 5,341,899 - Echvi_4467 0.22 +1.0 5,341,924 - Echvi_4467 0.28 -0.0 5,341,924 - Echvi_4467 0.28 +0.1 5,341,956 + Echvi_4467 0.36 -0.1 5,341,956 + Echvi_4467 0.36 -0.2 5,341,956 + Echvi_4467 0.36 +0.1 5,341,956 + Echvi_4467 0.36 +0.5 5,341,957 - Echvi_4467 0.37 +0.5 5,341,986 - Echvi_4467 0.44 -0.6 5,342,024 + Echvi_4467 0.54 +1.5 5,342,024 + Echvi_4467 0.54 +2.1 5,342,024 + Echvi_4467 0.54 -0.5 5,342,024 + Echvi_4467 0.54 +0.1 5,342,089 - Echvi_4467 0.71 -0.4 5,342,102 + Echvi_4467 0.74 +0.2 5,342,168 + +0.1 5,342,169 - -1.8 5,342,194 + +0.7 5,342,194 + +0.3 5,342,194 + -2.7 5,342,195 - +0.7 5,342,195 - +0.0 5,342,235 + +0.3 5,342,238 - +0.2 5,342,238 - +0.5 5,342,266 + +0.5 5,342,267 - -0.4 5,342,272 + +1.1 5,342,314 + +1.4 5,342,314 + +0.3 5,342,314 + -0.1 5,342,347 + -0.0 5,342,373 + -0.5 5,342,374 - -0.0 5,342,376 + -0.4 5,342,376 + +0.4 5,342,377 - -3.0 5,342,380 - -0.3 5,342,388 - -1.6 5,342,406 + +0.5 5,342,418 + -0.1 5,342,430 - +0.0 5,342,456 + +0.1 5,342,475 + -0.1 5,342,499 - +0.5 5,342,504 + +0.7 5,342,624 + Echvi_4468 0.11 -1.2 5,342,624 + Echvi_4468 0.11 -1.9 5,342,627 + Echvi_4468 0.12 +0.0 5,342,652 + Echvi_4468 0.13 +0.6 5,342,652 + Echvi_4468 0.13 +0.6
Or see this region's nucleotide sequence