Experiment: m.b. perchlorate 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2285 and Echvi_2286 are separated by 341 nucleotides Echvi_2286 and Echvi_2287 are separated by 33 nucleotides
Echvi_2285: Echvi_2285 - hypothetical protein, at 2,706,936 to 2,707,610
_2285
Echvi_2286: Echvi_2286 - hypothetical protein, at 2,707,952 to 2,709,088
_2286
Echvi_2287: Echvi_2287 - hypothetical protein, at 2,709,122 to 2,709,904
_2287
Position (kb)
2707
2708
2709
2710 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2707.014 kb on + strand, within Echvi_2285 at 2707.070 kb on - strand, within Echvi_2285 at 2707.096 kb on + strand, within Echvi_2285 at 2707.096 kb on + strand, within Echvi_2285 at 2707.096 kb on + strand, within Echvi_2285 at 2707.096 kb on + strand at 2707.096 kb on + strand, within Echvi_2285 at 2707.096 kb on + strand, within Echvi_2285 at 2707.097 kb on - strand, within Echvi_2285 at 2707.097 kb on - strand, within Echvi_2285 at 2707.097 kb on - strand, within Echvi_2285 at 2707.097 kb on - strand, within Echvi_2285 at 2707.097 kb on - strand, within Echvi_2285 at 2707.104 kb on + strand, within Echvi_2285 at 2707.212 kb on - strand, within Echvi_2285 at 2707.245 kb on + strand, within Echvi_2285 at 2707.333 kb on + strand, within Echvi_2285 at 2707.333 kb on + strand, within Echvi_2285 at 2707.334 kb on - strand, within Echvi_2285 at 2707.334 kb on - strand, within Echvi_2285 at 2707.399 kb on + strand, within Echvi_2285 at 2707.399 kb on + strand, within Echvi_2285 at 2707.425 kb on + strand, within Echvi_2285 at 2707.558 kb on - strand at 2707.560 kb on + strand at 2707.561 kb on - strand at 2707.569 kb on + strand at 2707.613 kb on + strand at 2707.645 kb on + strand at 2707.646 kb on - strand at 2707.646 kb on - strand at 2707.646 kb on - strand at 2707.679 kb on + strand at 2707.683 kb on + strand at 2707.779 kb on + strand at 2707.780 kb on - strand at 2707.780 kb on - strand at 2707.856 kb on - strand at 2708.033 kb on - strand at 2708.033 kb on - strand at 2708.033 kb on - strand at 2708.036 kb on + strand at 2708.036 kb on + strand at 2708.037 kb on - strand at 2708.037 kb on - strand at 2708.041 kb on - strand at 2708.065 kb on + strand at 2708.096 kb on + strand, within Echvi_2286 at 2708.106 kb on - strand, within Echvi_2286 at 2708.108 kb on - strand, within Echvi_2286 at 2708.161 kb on + strand, within Echvi_2286 at 2708.162 kb on - strand, within Echvi_2286 at 2708.166 kb on + strand, within Echvi_2286 at 2708.480 kb on + strand, within Echvi_2286 at 2708.519 kb on - strand, within Echvi_2286 at 2708.705 kb on + strand, within Echvi_2286 at 2708.706 kb on - strand, within Echvi_2286 at 2708.706 kb on - strand, within Echvi_2286 at 2708.706 kb on - strand, within Echvi_2286 at 2708.767 kb on - strand, within Echvi_2286 at 2708.768 kb on + strand, within Echvi_2286 at 2708.889 kb on + strand, within Echvi_2286 at 2708.889 kb on + strand, within Echvi_2286 at 2708.897 kb on + strand, within Echvi_2286 at 2708.898 kb on - strand, within Echvi_2286 at 2708.898 kb on - strand, within Echvi_2286 at 2708.947 kb on - strand, within Echvi_2286 at 2709.079 kb on - strand at 2709.087 kb on - strand at 2709.125 kb on + strand at 2709.125 kb on + strand at 2709.125 kb on + strand at 2709.226 kb on + strand, within Echvi_2287 at 2709.227 kb on - strand, within Echvi_2287 at 2709.231 kb on - strand, within Echvi_2287 at 2709.283 kb on - strand, within Echvi_2287 at 2709.501 kb on - strand, within Echvi_2287 at 2709.521 kb on + strand, within Echvi_2287 at 2709.522 kb on - strand, within Echvi_2287 at 2709.522 kb on - strand, within Echvi_2287 at 2709.530 kb on + strand, within Echvi_2287 at 2709.530 kb on + strand, within Echvi_2287 at 2709.531 kb on - strand, within Echvi_2287 at 2709.594 kb on - strand, within Echvi_2287 at 2709.668 kb on - strand, within Echvi_2287 at 2709.691 kb on - strand, within Echvi_2287 at 2709.700 kb on - strand, within Echvi_2287 at 2709.754 kb on + strand, within Echvi_2287 at 2709.754 kb on + strand, within Echvi_2287 at 2709.755 kb on - strand, within Echvi_2287 at 2709.799 kb on + strand, within Echvi_2287 at 2709.825 kb on + strand, within Echvi_2287 at 2709.922 kb on - strand at 2709.925 kb on - strand at 2710.009 kb on + strand at 2710.048 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 25 mM remove 2,707,014 + Echvi_2285 0.12 -0.3 2,707,070 - Echvi_2285 0.20 +0.2 2,707,096 + Echvi_2285 0.24 -0.3 2,707,096 + Echvi_2285 0.24 -0.5 2,707,096 + Echvi_2285 0.24 -0.1 2,707,096 + -0.1 2,707,096 + Echvi_2285 0.24 -0.2 2,707,096 + Echvi_2285 0.24 +0.6 2,707,097 - Echvi_2285 0.24 -0.7 2,707,097 - Echvi_2285 0.24 -0.0 2,707,097 - Echvi_2285 0.24 +0.3 2,707,097 - Echvi_2285 0.24 +1.0 2,707,097 - Echvi_2285 0.24 +0.0 2,707,104 + Echvi_2285 0.25 -0.5 2,707,212 - Echvi_2285 0.41 +1.0 2,707,245 + Echvi_2285 0.46 +1.0 2,707,333 + Echvi_2285 0.59 -0.6 2,707,333 + Echvi_2285 0.59 +0.3 2,707,334 - Echvi_2285 0.59 -1.2 2,707,334 - Echvi_2285 0.59 +0.9 2,707,399 + Echvi_2285 0.69 -1.8 2,707,399 + Echvi_2285 0.69 -0.3 2,707,425 + Echvi_2285 0.72 +0.3 2,707,558 - -0.1 2,707,560 + -0.3 2,707,561 - -0.5 2,707,569 + -0.2 2,707,613 + -0.4 2,707,645 + -0.5 2,707,646 - +0.2 2,707,646 - +1.6 2,707,646 - -1.5 2,707,679 + +1.4 2,707,683 + +1.3 2,707,779 + -1.5 2,707,780 - -0.7 2,707,780 - -0.6 2,707,856 - +1.0 2,708,033 - +2.2 2,708,033 - +1.0 2,708,033 - +0.3 2,708,036 + +0.6 2,708,036 + -1.6 2,708,037 - -0.0 2,708,037 - -0.5 2,708,041 - +1.7 2,708,065 + +0.8 2,708,096 + Echvi_2286 0.13 +3.5 2,708,106 - Echvi_2286 0.14 +0.6 2,708,108 - Echvi_2286 0.14 +0.0 2,708,161 + Echvi_2286 0.18 -0.3 2,708,162 - Echvi_2286 0.18 -1.4 2,708,166 + Echvi_2286 0.19 +1.2 2,708,480 + Echvi_2286 0.46 -0.5 2,708,519 - Echvi_2286 0.50 -0.7 2,708,705 + Echvi_2286 0.66 +1.0 2,708,706 - Echvi_2286 0.66 +0.8 2,708,706 - Echvi_2286 0.66 -0.8 2,708,706 - Echvi_2286 0.66 -0.6 2,708,767 - Echvi_2286 0.72 -0.5 2,708,768 + Echvi_2286 0.72 +0.7 2,708,889 + Echvi_2286 0.82 +0.7 2,708,889 + Echvi_2286 0.82 -0.5 2,708,897 + Echvi_2286 0.83 +1.3 2,708,898 - Echvi_2286 0.83 +1.1 2,708,898 - Echvi_2286 0.83 -0.1 2,708,947 - Echvi_2286 0.88 +0.6 2,709,079 - -0.2 2,709,087 - +0.4 2,709,125 + -0.1 2,709,125 + -0.7 2,709,125 + -0.1 2,709,226 + Echvi_2287 0.13 +0.3 2,709,227 - Echvi_2287 0.13 -0.1 2,709,231 - Echvi_2287 0.14 +0.4 2,709,283 - Echvi_2287 0.21 -0.2 2,709,501 - Echvi_2287 0.48 -0.4 2,709,521 + Echvi_2287 0.51 -0.8 2,709,522 - Echvi_2287 0.51 -0.7 2,709,522 - Echvi_2287 0.51 -1.0 2,709,530 + Echvi_2287 0.52 -1.7 2,709,530 + Echvi_2287 0.52 +0.2 2,709,531 - Echvi_2287 0.52 -2.4 2,709,594 - Echvi_2287 0.60 +0.2 2,709,668 - Echvi_2287 0.70 +0.0 2,709,691 - Echvi_2287 0.73 -0.3 2,709,700 - Echvi_2287 0.74 +0.4 2,709,754 + Echvi_2287 0.81 +0.8 2,709,754 + Echvi_2287 0.81 -0.1 2,709,755 - Echvi_2287 0.81 -0.6 2,709,799 + Echvi_2287 0.86 -0.2 2,709,825 + Echvi_2287 0.90 +0.2 2,709,922 - -0.7 2,709,925 - -1.3 2,710,009 + +0.2 2,710,048 - +1.9
Or see this region's nucleotide sequence