Experiment: m.b. perchlorate 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0744 and Echvi_0745 are separated by 360 nucleotides Echvi_0745 and Echvi_0746 are separated by 2 nucleotides Echvi_0746 and Echvi_0747 are separated by 352 nucleotides
Echvi_0744: Echvi_0744 - glycine dehydrogenase (decarboxylating), at 832,222 to 835,122
_0744
Echvi_0745: Echvi_0745 - Predicted aminopeptidases, at 835,483 to 836,979
_0745
Echvi_0746: Echvi_0746 - hypothetical protein, at 836,982 to 837,125
_0746
Echvi_0747: Echvi_0747 - Superfamily II DNA and RNA helicases, at 837,478 to 838,839
_0747
Position (kb) 835
836
837 Strain fitness (log2 ratio) -2
-1
0
1
2 at 834.679 kb on - strand, within Echvi_0744 at 834.789 kb on - strand, within Echvi_0744 at 834.795 kb on + strand, within Echvi_0744 at 834.807 kb on - strand, within Echvi_0744 at 834.807 kb on - strand, within Echvi_0744 at 834.840 kb on + strand at 834.840 kb on + strand at 834.841 kb on - strand at 834.863 kb on + strand at 834.880 kb on - strand at 834.880 kb on - strand at 835.139 kb on - strand at 835.142 kb on - strand at 835.143 kb on + strand at 835.143 kb on + strand at 835.144 kb on - strand at 835.144 kb on - strand at 835.154 kb on + strand at 835.155 kb on - strand at 835.155 kb on - strand at 835.293 kb on - strand at 835.294 kb on + strand at 835.295 kb on - strand at 835.295 kb on - strand at 835.378 kb on + strand at 835.429 kb on - strand at 835.439 kb on - strand at 835.439 kb on - strand at 835.442 kb on + strand at 835.443 kb on - strand at 835.443 kb on - strand at 835.448 kb on + strand at 835.448 kb on + strand at 835.465 kb on + strand at 835.466 kb on - strand at 835.476 kb on + strand at 835.476 kb on + strand at 835.476 kb on + strand at 835.477 kb on - strand at 835.478 kb on + strand at 835.495 kb on + strand at 835.496 kb on - strand at 835.521 kb on - strand at 835.607 kb on - strand at 835.607 kb on - strand at 835.616 kb on - strand at 835.725 kb on - strand, within Echvi_0745 at 835.735 kb on + strand, within Echvi_0745 at 835.735 kb on + strand, within Echvi_0745 at 835.736 kb on - strand, within Echvi_0745 at 835.855 kb on + strand, within Echvi_0745 at 836.057 kb on - strand, within Echvi_0745 at 836.176 kb on - strand, within Echvi_0745 at 836.176 kb on - strand, within Echvi_0745 at 836.255 kb on + strand, within Echvi_0745 at 836.255 kb on + strand, within Echvi_0745 at 836.279 kb on - strand, within Echvi_0745 at 836.282 kb on + strand, within Echvi_0745 at 836.310 kb on - strand, within Echvi_0745 at 836.329 kb on + strand, within Echvi_0745 at 836.329 kb on + strand, within Echvi_0745 at 836.329 kb on + strand, within Echvi_0745 at 836.349 kb on + strand, within Echvi_0745 at 836.349 kb on + strand, within Echvi_0745 at 836.349 kb on + strand, within Echvi_0745 at 836.468 kb on + strand, within Echvi_0745 at 836.507 kb on + strand, within Echvi_0745 at 836.508 kb on - strand, within Echvi_0745 at 836.508 kb on - strand, within Echvi_0745 at 836.508 kb on - strand, within Echvi_0745 at 836.508 kb on - strand, within Echvi_0745 at 836.518 kb on + strand, within Echvi_0745 at 836.518 kb on + strand, within Echvi_0745 at 836.518 kb on + strand, within Echvi_0745 at 836.518 kb on + strand, within Echvi_0745 at 836.519 kb on - strand, within Echvi_0745 at 836.521 kb on + strand, within Echvi_0745 at 836.521 kb on + strand, within Echvi_0745 at 836.522 kb on - strand, within Echvi_0745 at 836.522 kb on - strand, within Echvi_0745 at 836.568 kb on + strand, within Echvi_0745 at 836.568 kb on + strand, within Echvi_0745 at 836.596 kb on + strand, within Echvi_0745 at 836.596 kb on + strand, within Echvi_0745 at 836.602 kb on + strand, within Echvi_0745 at 836.626 kb on + strand, within Echvi_0745 at 836.626 kb on + strand, within Echvi_0745 at 836.626 kb on + strand, within Echvi_0745 at 836.626 kb on + strand, within Echvi_0745 at 836.627 kb on - strand, within Echvi_0745 at 836.627 kb on - strand, within Echvi_0745 at 836.627 kb on - strand, within Echvi_0745 at 836.627 kb on - strand, within Echvi_0745 at 836.630 kb on + strand, within Echvi_0745 at 836.631 kb on - strand, within Echvi_0745 at 836.631 kb on - strand, within Echvi_0745 at 836.631 kb on - strand, within Echvi_0745 at 836.632 kb on + strand, within Echvi_0745 at 836.632 kb on + strand, within Echvi_0745 at 836.632 kb on + strand, within Echvi_0745 at 836.633 kb on - strand, within Echvi_0745 at 836.633 kb on - strand, within Echvi_0745 at 836.684 kb on - strand, within Echvi_0745 at 836.689 kb on - strand, within Echvi_0745 at 836.689 kb on - strand, within Echvi_0745 at 836.689 kb on - strand, within Echvi_0745 at 836.689 kb on - strand, within Echvi_0745 at 836.691 kb on + strand, within Echvi_0745 at 836.692 kb on - strand, within Echvi_0745 at 836.692 kb on - strand, within Echvi_0745 at 836.725 kb on + strand, within Echvi_0745 at 836.726 kb on - strand, within Echvi_0745 at 836.755 kb on + strand, within Echvi_0745 at 836.759 kb on - strand, within Echvi_0745 at 836.773 kb on + strand, within Echvi_0745 at 836.773 kb on + strand, within Echvi_0745 at 836.774 kb on - strand, within Echvi_0745 at 836.774 kb on - strand, within Echvi_0745 at 836.801 kb on + strand, within Echvi_0745 at 836.834 kb on - strand at 836.905 kb on + strand at 836.907 kb on + strand at 836.907 kb on + strand at 836.929 kb on - strand at 836.977 kb on + strand at 836.984 kb on - strand at 836.991 kb on + strand at 836.992 kb on - strand at 836.992 kb on - strand at 837.125 kb on + strand at 837.125 kb on + strand at 837.126 kb on - strand at 837.126 kb on - strand at 837.126 kb on - strand at 837.126 kb on - strand at 837.129 kb on + strand at 837.129 kb on + strand at 837.168 kb on - strand at 837.168 kb on - strand at 837.313 kb on + strand at 837.343 kb on + strand at 837.343 kb on + strand at 837.398 kb on - strand at 837.447 kb on + strand at 837.450 kb on + strand at 837.450 kb on + strand at 837.451 kb on - strand at 837.451 kb on - strand at 837.467 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 25 mM remove 834,679 - Echvi_0744 0.85 +1.7 834,789 - Echvi_0744 0.88 +0.5 834,795 + Echvi_0744 0.89 +0.2 834,807 - Echvi_0744 0.89 +0.6 834,807 - Echvi_0744 0.89 +0.2 834,840 + +0.3 834,840 + -0.3 834,841 - +1.2 834,863 + +0.9 834,880 - +0.3 834,880 - -2.0 835,139 - -1.1 835,142 - +0.0 835,143 + -1.1 835,143 + -2.1 835,144 - +0.1 835,144 - +1.1 835,154 + -0.1 835,155 - -0.5 835,155 - +0.5 835,293 - -0.2 835,294 + +0.6 835,295 - +0.5 835,295 - +0.6 835,378 + -0.2 835,429 - +0.8 835,439 - -0.5 835,439 - +0.7 835,442 + +1.0 835,443 - +0.6 835,443 - -0.0 835,448 + -1.1 835,448 + +0.7 835,465 + +0.5 835,466 - +0.2 835,476 + +0.1 835,476 + -1.4 835,476 + +0.4 835,477 - +0.5 835,478 + +0.7 835,495 + +0.7 835,496 - +1.2 835,521 - +1.1 835,607 - +0.5 835,607 - +0.4 835,616 - +0.2 835,725 - Echvi_0745 0.16 +1.0 835,735 + Echvi_0745 0.17 -0.3 835,735 + Echvi_0745 0.17 +0.4 835,736 - Echvi_0745 0.17 +1.1 835,855 + Echvi_0745 0.25 +0.7 836,057 - Echvi_0745 0.38 +0.5 836,176 - Echvi_0745 0.46 +0.6 836,176 - Echvi_0745 0.46 +0.8 836,255 + Echvi_0745 0.52 -0.0 836,255 + Echvi_0745 0.52 +1.3 836,279 - Echvi_0745 0.53 +0.3 836,282 + Echvi_0745 0.53 +1.3 836,310 - Echvi_0745 0.55 +0.7 836,329 + Echvi_0745 0.57 +1.0 836,329 + Echvi_0745 0.57 +0.7 836,329 + Echvi_0745 0.57 +0.9 836,349 + Echvi_0745 0.58 +0.4 836,349 + Echvi_0745 0.58 -0.4 836,349 + Echvi_0745 0.58 +0.3 836,468 + Echvi_0745 0.66 +0.4 836,507 + Echvi_0745 0.68 +0.9 836,508 - Echvi_0745 0.68 +0.7 836,508 - Echvi_0745 0.68 -1.8 836,508 - Echvi_0745 0.68 +0.2 836,508 - Echvi_0745 0.68 +0.3 836,518 + Echvi_0745 0.69 +0.3 836,518 + Echvi_0745 0.69 +0.4 836,518 + Echvi_0745 0.69 +0.5 836,518 + Echvi_0745 0.69 +0.5 836,519 - Echvi_0745 0.69 +1.2 836,521 + Echvi_0745 0.69 +0.4 836,521 + Echvi_0745 0.69 -0.4 836,522 - Echvi_0745 0.69 +0.7 836,522 - Echvi_0745 0.69 -0.4 836,568 + Echvi_0745 0.72 +0.6 836,568 + Echvi_0745 0.72 +1.1 836,596 + Echvi_0745 0.74 +0.8 836,596 + Echvi_0745 0.74 +0.5 836,602 + Echvi_0745 0.75 +0.4 836,626 + Echvi_0745 0.76 +1.6 836,626 + Echvi_0745 0.76 +1.0 836,626 + Echvi_0745 0.76 +0.4 836,626 + Echvi_0745 0.76 +2.2 836,627 - Echvi_0745 0.76 +1.1 836,627 - Echvi_0745 0.76 +0.9 836,627 - Echvi_0745 0.76 +0.4 836,627 - Echvi_0745 0.76 +0.7 836,630 + Echvi_0745 0.77 +1.1 836,631 - Echvi_0745 0.77 +1.8 836,631 - Echvi_0745 0.77 +2.4 836,631 - Echvi_0745 0.77 +0.7 836,632 + Echvi_0745 0.77 +0.7 836,632 + Echvi_0745 0.77 -0.8 836,632 + Echvi_0745 0.77 +0.6 836,633 - Echvi_0745 0.77 +0.7 836,633 - Echvi_0745 0.77 -0.8 836,684 - Echvi_0745 0.80 -0.7 836,689 - Echvi_0745 0.81 +0.3 836,689 - Echvi_0745 0.81 +1.9 836,689 - Echvi_0745 0.81 +1.3 836,689 - Echvi_0745 0.81 +0.6 836,691 + Echvi_0745 0.81 +1.3 836,692 - Echvi_0745 0.81 +0.8 836,692 - Echvi_0745 0.81 +1.5 836,725 + Echvi_0745 0.83 +0.7 836,726 - Echvi_0745 0.83 +0.4 836,755 + Echvi_0745 0.85 -0.0 836,759 - Echvi_0745 0.85 +1.8 836,773 + Echvi_0745 0.86 +0.8 836,773 + Echvi_0745 0.86 +1.0 836,774 - Echvi_0745 0.86 +0.2 836,774 - Echvi_0745 0.86 +1.2 836,801 + Echvi_0745 0.88 +2.1 836,834 - -1.4 836,905 + +0.4 836,907 + +1.1 836,907 + +0.6 836,929 - +1.0 836,977 + -2.0 836,984 - -0.4 836,991 + -0.4 836,992 - -0.0 836,992 - +1.5 837,125 + -1.2 837,125 + +0.3 837,126 - -0.4 837,126 - +0.7 837,126 - +0.5 837,126 - +0.7 837,129 + +0.0 837,129 + -1.8 837,168 - -0.6 837,168 - -0.9 837,313 + -0.2 837,343 + -1.4 837,343 + -0.8 837,398 - +0.8 837,447 + -0.1 837,450 + -1.0 837,450 + -0.8 837,451 - +1.4 837,451 - -2.1 837,467 + -0.2
Or see this region's nucleotide sequence