Experiment: D-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS23260 and ABIE40_RS23265 are separated by 1 nucleotides ABIE40_RS23265 and ABIE40_RS23270 are separated by 1 nucleotides ABIE40_RS23270 and ABIE40_RS23275 are separated by 1 nucleotides
ABIE40_RS23260: ABIE40_RS23260 - L-aspartate oxidase, at 800,437 to 801,975
_RS23260
ABIE40_RS23265: ABIE40_RS23265 - carboxylating nicotinate-nucleotide diphosphorylase, at 801,977 to 802,834
_RS23265
ABIE40_RS23270: ABIE40_RS23270 - Isoquinoline 1-oxidoreductase subunit, at 802,836 to 803,474
_RS23270
ABIE40_RS23275: ABIE40_RS23275 - molybdopterin cofactor-binding domain-containing protein, at 803,476 to 805,632
_RS23275
Position (kb) 801
802
803 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 801.034 kb on + strand, within ABIE40_RS23260 at 801.034 kb on + strand, within ABIE40_RS23260 at 801.034 kb on + strand, within ABIE40_RS23260 at 801.034 kb on + strand, within ABIE40_RS23260 at 801.034 kb on + strand, within ABIE40_RS23260 at 801.034 kb on + strand, within ABIE40_RS23260 at 801.034 kb on + strand, within ABIE40_RS23260 at 801.034 kb on + strand, within ABIE40_RS23260 at 801.035 kb on - strand, within ABIE40_RS23260 at 801.035 kb on - strand, within ABIE40_RS23260 at 801.035 kb on - strand, within ABIE40_RS23260 at 801.274 kb on - strand, within ABIE40_RS23260 at 801.448 kb on + strand, within ABIE40_RS23260 at 801.448 kb on + strand, within ABIE40_RS23260 at 801.448 kb on + strand, within ABIE40_RS23260 at 801.448 kb on + strand, within ABIE40_RS23260 at 801.449 kb on - strand, within ABIE40_RS23260 at 801.449 kb on - strand, within ABIE40_RS23260 at 801.453 kb on + strand, within ABIE40_RS23260 at 801.453 kb on + strand, within ABIE40_RS23260 at 801.453 kb on + strand, within ABIE40_RS23260 at 801.454 kb on - strand, within ABIE40_RS23260 at 801.454 kb on - strand, within ABIE40_RS23260 at 801.454 kb on - strand, within ABIE40_RS23260 at 801.454 kb on - strand, within ABIE40_RS23260 at 801.454 kb on - strand, within ABIE40_RS23260 at 801.561 kb on + strand, within ABIE40_RS23260 at 801.561 kb on + strand, within ABIE40_RS23260 at 801.561 kb on + strand, within ABIE40_RS23260 at 801.561 kb on + strand, within ABIE40_RS23260 at 801.562 kb on - strand, within ABIE40_RS23260 at 801.562 kb on - strand, within ABIE40_RS23260 at 801.691 kb on - strand, within ABIE40_RS23260 at 801.691 kb on - strand, within ABIE40_RS23260 at 801.691 kb on - strand, within ABIE40_RS23260 at 802.092 kb on - strand, within ABIE40_RS23265 at 802.186 kb on + strand, within ABIE40_RS23265 at 802.186 kb on + strand, within ABIE40_RS23265 at 802.381 kb on + strand, within ABIE40_RS23265 at 802.381 kb on + strand, within ABIE40_RS23265 at 802.381 kb on + strand, within ABIE40_RS23265 at 802.381 kb on + strand, within ABIE40_RS23265 at 802.421 kb on + strand, within ABIE40_RS23265 at 802.421 kb on + strand, within ABIE40_RS23265 at 802.422 kb on - strand, within ABIE40_RS23265 at 802.642 kb on + strand, within ABIE40_RS23265 at 802.643 kb on - strand, within ABIE40_RS23265 at 802.643 kb on - strand, within ABIE40_RS23265 at 802.643 kb on - strand, within ABIE40_RS23265 at 802.680 kb on + strand, within ABIE40_RS23265 at 802.680 kb on + strand, within ABIE40_RS23265 at 802.680 kb on + strand, within ABIE40_RS23265 at 802.680 kb on + strand, within ABIE40_RS23265 at 802.681 kb on - strand, within ABIE40_RS23265 at 802.681 kb on - strand, within ABIE40_RS23265 at 802.681 kb on - strand, within ABIE40_RS23265 at 802.681 kb on - strand, within ABIE40_RS23265 at 802.762 kb on + strand at 802.762 kb on + strand at 802.762 kb on + strand at 802.763 kb on - strand at 802.763 kb on - strand at 802.763 kb on - strand at 802.763 kb on - strand at 802.837 kb on + strand at 802.837 kb on + strand at 802.838 kb on - strand at 802.838 kb on - strand at 803.013 kb on - strand, within ABIE40_RS23270 at 803.392 kb on + strand, within ABIE40_RS23270 at 803.392 kb on + strand, within ABIE40_RS23270 at 803.393 kb on - strand, within ABIE40_RS23270 at 803.393 kb on - strand, within ABIE40_RS23270 at 803.393 kb on - strand, within ABIE40_RS23270 at 803.393 kb on - strand, within ABIE40_RS23270 at 803.393 kb on - strand, within ABIE40_RS23270 at 803.399 kb on + strand, within ABIE40_RS23270 at 803.399 kb on + strand, within ABIE40_RS23270 at 803.400 kb on - strand, within ABIE40_RS23270 at 803.400 kb on - strand, within ABIE40_RS23270 at 803.400 kb on - strand, within ABIE40_RS23270 at 803.720 kb on + strand, within ABIE40_RS23275 at 803.720 kb on + strand, within ABIE40_RS23275 at 803.741 kb on + strand, within ABIE40_RS23275 at 803.741 kb on + strand, within ABIE40_RS23275 at 803.742 kb on - strand, within ABIE40_RS23275
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (C) remove 801,034 + ABIE40_RS23260 0.39 -0.1 801,034 + ABIE40_RS23260 0.39 -0.2 801,034 + ABIE40_RS23260 0.39 +1.9 801,034 + ABIE40_RS23260 0.39 +0.6 801,034 + ABIE40_RS23260 0.39 +0.3 801,034 + ABIE40_RS23260 0.39 +0.8 801,034 + ABIE40_RS23260 0.39 -0.4 801,034 + ABIE40_RS23260 0.39 -0.5 801,035 - ABIE40_RS23260 0.39 +0.3 801,035 - ABIE40_RS23260 0.39 -2.0 801,035 - ABIE40_RS23260 0.39 -0.3 801,274 - ABIE40_RS23260 0.54 +0.7 801,448 + ABIE40_RS23260 0.66 -0.6 801,448 + ABIE40_RS23260 0.66 +0.5 801,448 + ABIE40_RS23260 0.66 +0.2 801,448 + ABIE40_RS23260 0.66 +0.3 801,449 - ABIE40_RS23260 0.66 -1.3 801,449 - ABIE40_RS23260 0.66 +0.8 801,453 + ABIE40_RS23260 0.66 +0.2 801,453 + ABIE40_RS23260 0.66 +1.8 801,453 + ABIE40_RS23260 0.66 +0.5 801,454 - ABIE40_RS23260 0.66 -1.0 801,454 - ABIE40_RS23260 0.66 +0.8 801,454 - ABIE40_RS23260 0.66 -0.5 801,454 - ABIE40_RS23260 0.66 -1.5 801,454 - ABIE40_RS23260 0.66 -1.1 801,561 + ABIE40_RS23260 0.73 -0.4 801,561 + ABIE40_RS23260 0.73 -0.4 801,561 + ABIE40_RS23260 0.73 +0.8 801,561 + ABIE40_RS23260 0.73 +0.1 801,562 - ABIE40_RS23260 0.73 -0.4 801,562 - ABIE40_RS23260 0.73 +2.1 801,691 - ABIE40_RS23260 0.81 -0.8 801,691 - ABIE40_RS23260 0.81 +0.2 801,691 - ABIE40_RS23260 0.81 -2.2 802,092 - ABIE40_RS23265 0.13 -1.3 802,186 + ABIE40_RS23265 0.24 -0.6 802,186 + ABIE40_RS23265 0.24 -1.2 802,381 + ABIE40_RS23265 0.47 -2.8 802,381 + ABIE40_RS23265 0.47 -1.0 802,381 + ABIE40_RS23265 0.47 -1.2 802,381 + ABIE40_RS23265 0.47 -0.4 802,421 + ABIE40_RS23265 0.52 -1.7 802,421 + ABIE40_RS23265 0.52 -3.9 802,422 - ABIE40_RS23265 0.52 -1.9 802,642 + ABIE40_RS23265 0.78 -2.3 802,643 - ABIE40_RS23265 0.78 -2.7 802,643 - ABIE40_RS23265 0.78 -2.3 802,643 - ABIE40_RS23265 0.78 -1.5 802,680 + ABIE40_RS23265 0.82 -4.5 802,680 + ABIE40_RS23265 0.82 +2.1 802,680 + ABIE40_RS23265 0.82 -0.5 802,680 + ABIE40_RS23265 0.82 +0.3 802,681 - ABIE40_RS23265 0.82 -1.9 802,681 - ABIE40_RS23265 0.82 +2.7 802,681 - ABIE40_RS23265 0.82 -1.8 802,681 - ABIE40_RS23265 0.82 -2.1 802,762 + -2.1 802,762 + -1.1 802,762 + -1.6 802,763 - -2.1 802,763 - +2.1 802,763 - -1.7 802,763 - -3.0 802,837 + -1.0 802,837 + -0.3 802,838 - -0.3 802,838 - +0.4 803,013 - ABIE40_RS23270 0.28 -0.0 803,392 + ABIE40_RS23270 0.87 +0.3 803,392 + ABIE40_RS23270 0.87 -0.6 803,393 - ABIE40_RS23270 0.87 -1.6 803,393 - ABIE40_RS23270 0.87 -0.3 803,393 - ABIE40_RS23270 0.87 +0.1 803,393 - ABIE40_RS23270 0.87 -0.5 803,393 - ABIE40_RS23270 0.87 -0.4 803,399 + ABIE40_RS23270 0.88 -0.6 803,399 + ABIE40_RS23270 0.88 +0.0 803,400 - ABIE40_RS23270 0.88 -0.7 803,400 - ABIE40_RS23270 0.88 +1.1 803,400 - ABIE40_RS23270 0.88 -0.2 803,720 + ABIE40_RS23275 0.11 -0.3 803,720 + ABIE40_RS23275 0.11 +0.8 803,741 + ABIE40_RS23275 0.12 +1.5 803,741 + ABIE40_RS23275 0.12 -0.9 803,742 - ABIE40_RS23275 0.12 -0.5
Or see this region's nucleotide sequence