Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS14850

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
2,908,822	+		ABIE40_RS14845	0.41	-2.0
2,908,822	+		ABIE40_RS14845	0.41	-0.3
2,908,823	-		ABIE40_RS14845	0.41	-2.5
2,908,882	+		ABIE40_RS14845	0.45	+0.4
2,908,883	-		ABIE40_RS14845	0.45	+0.4
2,908,883	-		ABIE40_RS14845	0.45	-0.6
2,908,999	+		ABIE40_RS14845	0.53	+0.4
2,909,151	+		ABIE40_RS14845	0.64	-0.4
2,909,151	+		ABIE40_RS14845	0.64	+0.6
2,909,151	+		ABIE40_RS14845	0.64	-1.2
2,909,151	+		ABIE40_RS14845	0.64	-2.0
2,909,151	+		ABIE40_RS14845	0.64	-1.8
2,909,151	+		ABIE40_RS14845	0.64	-2.5
2,909,151	+		ABIE40_RS14845	0.64	-0.7
2,909,151	+		ABIE40_RS14845	0.64	+0.2
2,909,152	-		ABIE40_RS14845	0.64	-0.3
2,909,152	-		ABIE40_RS14845	0.64	+0.4
2,909,152	-		ABIE40_RS14845	0.64	+0.4
2,909,236	+		ABIE40_RS14845	0.70	-0.9
2,909,237	-		ABIE40_RS14845	0.70	-0.1
2,909,237	-		ABIE40_RS14845	0.70	+0.1
2,909,356	+		ABIE40_RS14845	0.78	-0.1
2,909,356	+		ABIE40_RS14845	0.78	-0.5
2,909,356	+		ABIE40_RS14845	0.78	-0.9
2,909,356	+		ABIE40_RS14845	0.78	+0.6
2,909,357	-		ABIE40_RS14845	0.78	-0.9
2,909,357	-		ABIE40_RS14845	0.78	+0.9
2,909,357	-		ABIE40_RS14845	0.78	-2.2
2,909,358	+		ABIE40_RS14845	0.78	-0.2
2,909,359	-		ABIE40_RS14845	0.78	-0.4
2,909,359	-		ABIE40_RS14845	0.78	+1.6
2,909,359	-		ABIE40_RS14845	0.78	+0.2
2,909,359	-		ABIE40_RS14845	0.78	-0.7
2,909,533	+				-0.2
2,909,533	+				-1.0
2,909,533	+				-0.7
2,909,534	-				-0.3
2,909,534	-				+0.9
2,909,534	-				-0.4
2,909,534	-				+1.1
2,909,535	+				-0.1
2,909,614	+				-0.7
2,909,615	-				+1.6
2,909,689	+				-1.0
2,909,689	+				+0.0
2,909,689	+				+0.1
2,909,690	-				-0.8
2,909,705	+				-0.4
2,909,760	-				+0.3
2,909,771	+				-1.5
2,909,772	-				-2.2
2,909,772	-				-2.4
2,909,772	-				-0.7
2,909,777	+				-1.9
2,909,777	+				-0.4
2,909,777	+				-0.7
2,909,777	+				-1.9
2,909,778	-				-2.4
2,909,778	-				+0.2
2,909,778	-				+0.2
2,909,937	-		ABIE40_RS14850	0.13	-0.4
2,910,060	+		ABIE40_RS14850	0.22	-2.2
2,910,060	+		ABIE40_RS14850	0.22	-2.0
2,910,060	+		ABIE40_RS14850	0.22	-2.1
2,910,060	+		ABIE40_RS14850	0.22	-0.5
2,910,060	+		ABIE40_RS14850	0.22	-2.4
2,910,061	-		ABIE40_RS14850	0.22	-2.5
2,910,061	-		ABIE40_RS14850	0.22	-3.1
2,910,061	-		ABIE40_RS14850	0.22	-0.4
2,910,061	-		ABIE40_RS14850	0.22	-0.6
2,910,061	-		ABIE40_RS14850	0.22	-3.4
2,910,061	-		ABIE40_RS14850	0.22	-1.2
2,910,061	-		ABIE40_RS14850	0.22	-1.7
2,910,061	-		ABIE40_RS14850	0.22	+0.0
2,910,061	-		ABIE40_RS14850	0.22	-0.9
2,910,061	-		ABIE40_RS14850	0.22	-2.7
2,910,061	-		ABIE40_RS14850	0.22	-3.5
2,910,066	+		ABIE40_RS14850	0.23	-0.7
2,910,067	-		ABIE40_RS14850	0.23	-1.8
2,910,067	-		ABIE40_RS14850	0.23	-0.7
2,910,067	-		ABIE40_RS14850	0.23	+0.2
2,910,067	-		ABIE40_RS14850	0.23	-2.9
2,910,318	+		ABIE40_RS14850	0.42	-1.1
2,910,330	+		ABIE40_RS14850	0.43	-2.0
2,910,387	+		ABIE40_RS14850	0.47	-1.4
2,910,566	+		ABIE40_RS14850	0.61	-2.7
2,910,567	-		ABIE40_RS14850	0.61	-3.7
2,910,567	-		ABIE40_RS14850	0.61	-3.0
2,910,567	-		ABIE40_RS14850	0.61	-0.5
2,910,567	-		ABIE40_RS14850	0.61	-2.4
2,910,779	+		ABIE40_RS14850	0.77	-2.2
2,910,780	-		ABIE40_RS14850	0.77	-1.4
2,910,819	+		ABIE40_RS14850	0.80	-1.7
2,910,870	+		ABIE40_RS14850	0.84	-1.3
2,911,011	+				-1.3
2,911,011	+				-0.8
2,911,011	+				-1.7
2,911,011	+				-1.5
2,911,012	-				-2.8
2,911,035	+				-0.2
2,911,035	+				+0.0
2,911,036	-				-1.6
2,911,047	+				-1.5
2,911,048	-				-2.1
2,911,080	+				-0.5
2,911,080	+				+0.7
2,911,081	-				-2.0
2,911,081	-				-2.7
2,911,091	+				-0.5
2,911,091	+				+0.2
2,911,092	-				+0.0
2,911,191	-		ABIE40_RS14855	0.10	-1.1
2,911,193	+		ABIE40_RS14855	0.11	+0.9
2,911,193	+		ABIE40_RS14855	0.11	-1.0
2,911,193	+		ABIE40_RS14855	0.11	-1.4
2,911,194	-		ABIE40_RS14855	0.11	-1.2
2,911,194	-		ABIE40_RS14855	0.11	-0.2
2,911,194	-		ABIE40_RS14855	0.11	+0.1
2,911,194	-		ABIE40_RS14855	0.11	-1.0
2,911,194	-		ABIE40_RS14855	0.11	-0.8
2,911,194	-		ABIE40_RS14855	0.11	-2.4
2,911,213	+		ABIE40_RS14855	0.13	-0.1
2,911,213	+		ABIE40_RS14855	0.13	-0.8
2,911,214	-		ABIE40_RS14855	0.13	+0.9
2,911,214	-		ABIE40_RS14855	0.13	-1.7
2,911,435	+		ABIE40_RS14855	0.34	+0.6
2,911,436	-		ABIE40_RS14855	0.34	-1.2
2,911,538	+		ABIE40_RS14855	0.44	-0.4
2,911,539	-		ABIE40_RS14855	0.44	-0.4
2,911,539	-		ABIE40_RS14855	0.44	-1.5
2,911,539	-		ABIE40_RS14855	0.44	-0.1
2,911,580	+		ABIE40_RS14855	0.48	+0.5
2,911,580	+		ABIE40_RS14855	0.48	-1.2
2,911,580	+		ABIE40_RS14855	0.48	+0.1
2,911,581	-		ABIE40_RS14855	0.48	-0.7
2,911,581	-		ABIE40_RS14855	0.48	-1.6
2,911,593	-		ABIE40_RS14855	0.50	+0.6
2,911,631	+		ABIE40_RS14855	0.53	+0.4
2,911,631	+		ABIE40_RS14855	0.53	+0.4
2,911,709	+		ABIE40_RS14855	0.61	-0.7
2,911,742	+		ABIE40_RS14855	0.64	-2.1
2,911,743	-		ABIE40_RS14855	0.64	-1.2
2,911,744	+		ABIE40_RS14855	0.64	+0.3
2,912,018	+				-2.2
2,912,018	+				-1.1
2,912,019	-				-1.9