Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS14565

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
2,850,607	-		ABIE40_RS14560	0.50	-1.0
2,850,682	+		ABIE40_RS14560	0.56	-0.2
2,850,695	+		ABIE40_RS14560	0.58	+1.1
2,850,695	+		ABIE40_RS14560	0.58	+1.4
2,850,695	+		ABIE40_RS14560	0.58	-1.4
2,850,696	-		ABIE40_RS14560	0.58	-0.4
2,850,696	-		ABIE40_RS14560	0.58	-0.2
2,850,696	-		ABIE40_RS14560	0.58	-0.4
2,850,870	+		ABIE40_RS14560	0.73	-0.0
2,850,870	+		ABIE40_RS14560	0.73	-0.4
2,850,870	+		ABIE40_RS14560	0.73	+2.4
2,850,871	-		ABIE40_RS14560	0.73	-0.5
2,850,871	-		ABIE40_RS14560	0.73	-0.2
2,850,871	-		ABIE40_RS14560	0.73	-0.6
2,850,871	-		ABIE40_RS14560	0.73	+1.0
2,850,883	-		ABIE40_RS14560	0.74	-0.1
2,851,158	-				-0.0
2,851,170	+				-0.6
2,851,170	+				-0.2
2,851,171	-				-0.7
2,851,171	-				+0.6
2,851,171	-				-0.6
2,851,182	+				-0.3
2,851,183	-				-0.0
2,851,183	-				+0.5
2,851,207	+				+0.3
2,851,207	+				-0.5
2,851,350	+		ABIE40_RS14565	0.12	-0.1
2,851,353	+		ABIE40_RS14565	0.13	-0.0
2,851,353	+		ABIE40_RS14565	0.13	+0.6
2,851,353	+		ABIE40_RS14565	0.13	-0.9
2,851,353	+		ABIE40_RS14565	0.13	+0.6
2,851,354	-		ABIE40_RS14565	0.13	-0.2
2,851,354	-		ABIE40_RS14565	0.13	+1.3
2,851,374	+		ABIE40_RS14565	0.15	+0.5
2,851,374	+		ABIE40_RS14565	0.15	-0.1
2,851,375	-		ABIE40_RS14565	0.15	-0.3
2,851,377	+		ABIE40_RS14565	0.15	+0.3
2,851,377	+		ABIE40_RS14565	0.15	+2.1
2,851,377	+		ABIE40_RS14565	0.15	+1.7
2,851,377	+		ABIE40_RS14565	0.15	+0.4
2,851,378	-		ABIE40_RS14565	0.15	+0.3
2,851,378	-		ABIE40_RS14565	0.15	+2.4
2,851,378	-		ABIE40_RS14565	0.15	-1.1
2,851,378	-		ABIE40_RS14565	0.15	-0.1
2,851,378	-		ABIE40_RS14565	0.15	-0.6
2,851,540	-		ABIE40_RS14565	0.32	-0.6
2,851,613	+		ABIE40_RS14565	0.39	-0.1
2,851,613	+		ABIE40_RS14565	0.39	+0.9
2,851,613	+		ABIE40_RS14565	0.39	+1.3
2,851,613	+		ABIE40_RS14565	0.39	-0.5
2,851,613	+		ABIE40_RS14565	0.39	+0.1
2,851,613	+		ABIE40_RS14565	0.39	-0.3
2,851,613	+		ABIE40_RS14565	0.39	-0.9
2,851,613	+		ABIE40_RS14565	0.39	-0.3
2,851,613	+		ABIE40_RS14565	0.39	-0.1
2,851,613	+		ABIE40_RS14565	0.39	-0.2
2,851,613	+		ABIE40_RS14565	0.39	-0.7
2,851,614	-		ABIE40_RS14565	0.40	+1.9
2,851,614	-		ABIE40_RS14565	0.40	-0.7
2,851,614	-		ABIE40_RS14565	0.40	-0.1
2,851,614	-		ABIE40_RS14565	0.40	-0.3
2,851,614	-		ABIE40_RS14565	0.40	+0.3
2,851,614	-		ABIE40_RS14565	0.40	-0.3
2,851,779	+		ABIE40_RS14565	0.56	-1.1
2,851,779	+		ABIE40_RS14565	0.56	+1.4
2,851,779	+		ABIE40_RS14565	0.56	+2.5
2,851,779	+		ABIE40_RS14565	0.56	-1.1
2,851,779	+		ABIE40_RS14565	0.56	-0.6
2,851,779	+		ABIE40_RS14565	0.56	+0.9
2,851,780	-		ABIE40_RS14565	0.57	-0.2
2,851,780	-		ABIE40_RS14565	0.57	+0.2
2,851,780	-		ABIE40_RS14565	0.57	-0.5
2,851,781	+		ABIE40_RS14565	0.57	-1.1
2,851,781	+		ABIE40_RS14565	0.57	-2.9
2,851,785	+		ABIE40_RS14565	0.57	+0.2
2,851,785	+		ABIE40_RS14565	0.57	-0.0
2,851,789	-		ABIE40_RS14565	0.58	+0.7
2,851,842	+		ABIE40_RS14565	0.63	-0.3
2,851,843	-		ABIE40_RS14565	0.63	-0.7
2,851,843	-		ABIE40_RS14565	0.63	+0.8
2,851,881	+		ABIE40_RS14565	0.67	-0.1
2,851,881	+		ABIE40_RS14565	0.67	+1.7
2,851,881	+		ABIE40_RS14565	0.67	+1.7
2,851,881	+		ABIE40_RS14565	0.67	-0.7
2,851,881	+		ABIE40_RS14565	0.67	-0.5
2,851,882	-		ABIE40_RS14565	0.67	-0.1
2,851,882	-		ABIE40_RS14565	0.67	+1.1
2,851,965	+		ABIE40_RS14565	0.76	-1.6
2,851,965	+		ABIE40_RS14565	0.76	+0.1
2,852,104	-				-0.1
2,852,104	-				+0.2
2,852,199	+				-0.1
2,852,199	+				-1.5
2,852,200	-				-1.1
2,852,200	-				+0.2
2,852,258	+				-1.0
2,852,259	-				-0.7
2,852,325	-				-3.2
2,852,325	-				-0.7
2,852,325	-				-0.7
2,852,326	+				+0.6
2,852,326	+				+0.5
2,852,326	+				-0.5
2,852,326	+				-1.7
2,852,326	+				-1.3
2,852,327	-				+0.1
2,852,327	-				-0.4
2,852,327	-				-1.6
2,852,327	-				-1.7
2,852,327	-				-0.2
2,852,358	-				-0.2
2,852,377	+				-0.8
2,852,378	-				-1.2
2,852,378	-				-0.3
2,852,378	-				-1.7
2,852,378	-				-0.2
2,852,378	-				-2.4
2,852,379	+				-0.5
2,852,379	+				+3.0
2,852,380	-				+0.7
2,852,383	+				-1.2
2,852,383	+				-0.3
2,852,384	-				+0.4
2,852,394	+				-0.3
2,852,394	+				-1.4
2,852,395	-				+0.7
2,852,395	-				-0.2
2,852,395	-				-0.3
2,852,433	+				-0.2
2,852,433	+				+0.6
2,852,434	-				-1.0
2,852,434	-				-1.0
2,852,434	-				-1.1
2,852,434	-				-0.1
2,852,434	-				+0.5
2,852,434	-				-0.7
2,852,434	-				+1.0
2,852,450	+				-0.1
2,852,457	+				-0.1
2,852,457	+				-1.5
2,852,457	+				+1.4
2,852,458	-				-1.0
2,852,458	-				-1.5
2,852,458	-				+0.5
2,852,509	+				-0.8
2,852,509	+				+0.5
2,852,510	-				+0.5
2,852,510	-				-0.2
2,852,520	+				-0.5
2,852,521	-				+1.7
2,852,521	-				-0.5
2,852,569	+				+0.2
2,852,569	+				-2.4
2,852,570	-				-0.1
2,852,570	-				+0.4
2,852,570	-				-0.2
2,852,600	+				-0.9
2,852,600	+				-0.6
2,852,601	-				-0.2
2,852,601	-				-0.8
2,852,601	-				+0.4
2,852,601	-				+0.5
2,852,601	-				-0.2
2,852,636	+				+0.8
2,852,636	+				-0.3
2,852,637	-				-1.1
2,852,640	-				-1.3
2,852,640	-				+0.1
2,852,640	-				-0.3
2,852,818	+		ABIE40_RS14570	0.17	+0.4
2,852,819	-		ABIE40_RS14570	0.17	-1.5
2,852,819	-		ABIE40_RS14570	0.17	+0.0
2,852,820	+		ABIE40_RS14570	0.17	-0.3
2,852,820	+		ABIE40_RS14570	0.17	+0.9