Strain Fitness in Ralstonia solanacearum UW163 around UW163_RS02475

Experiment: M63_quarter_strength

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntUW163_RS02465 and UW163_RS02470 are separated by 18 nucleotidesUW163_RS02470 and UW163_RS02475 are separated by 50 nucleotidesUW163_RS02475 and UW163_RS02480 are separated by 83 nucleotides UW163_RS02465: UW163_RS02465 - outer membrane lipoprotein LolB, at 518,886 to 519,515 _RS02465 UW163_RS02470: UW163_RS02470 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 519,534 to 520,403 _RS02470 UW163_RS02475: UW163_RS02475 - tRNA-Gln, at 520,454 to 520,530 _RS02475 UW163_RS02480: UW163_RS02480 - ribose-phosphate pyrophosphokinase, at 520,614 to 521,564 _RS02480 Position (kb) 520 521Strain fitness (log2 ratio) -1 0 1at 519.513 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M63_quarter_strength
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519,513 + -0.1

Or see this region's nucleotide sequence