Experiment: M63_quarter_strength
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt UW163_RS02365 and UW163_RS02370 are separated by 133 nucleotides UW163_RS02370 and UW163_RS02375 are separated by 43 nucleotides UW163_RS02375 and UW163_RS02380 are separated by 10 nucleotides
UW163_RS02365: UW163_RS02365 - adenine phosphoribosyltransferase, at 498,611 to 499,219
_RS02365
UW163_RS02370: UW163_RS02370 - glutamine amidotransferase, at 499,353 to 499,931
_RS02370
UW163_RS02375: UW163_RS02375 - aryl-sulfate sulfotransferase, at 499,975 to 500,379
_RS02375
UW163_RS02380: UW163_RS02380 - potassium transporter, at 500,390 to 502,369
_RS02380
Position (kb) 499
500
501 Strain fitness (log2 ratio) -1
0
1 at 499.024 kb on - strand, within UW163_RS02365 at 499.149 kb on + strand, within UW163_RS02365 at 499.150 kb on - strand, within UW163_RS02365 at 499.367 kb on - strand at 499.386 kb on + strand at 499.386 kb on + strand at 499.386 kb on + strand at 499.386 kb on + strand at 499.387 kb on - strand at 499.524 kb on + strand, within UW163_RS02370 at 499.524 kb on + strand, within UW163_RS02370 at 499.525 kb on - strand at 499.590 kb on + strand, within UW163_RS02370 at 499.925 kb on - strand at 500.377 kb on + strand at 500.664 kb on + strand, within UW163_RS02380 at 500.683 kb on - strand, within UW163_RS02380 at 500.997 kb on + strand, within UW163_RS02380 at 500.997 kb on + strand, within UW163_RS02380 at 500.998 kb on - strand, within UW163_RS02380 at 501.063 kb on + strand, within UW163_RS02380 at 501.064 kb on - strand, within UW163_RS02380
Per-strain Table
Position Strand Gene LocusTag Fraction M63_quarter_strength remove 499,024 - UW163_RS02365 0.68 -0.2 499,149 + UW163_RS02365 0.88 -0.8 499,150 - UW163_RS02365 0.89 +0.4 499,367 - +0.3 499,386 + +1.2 499,386 + -0.1 499,386 + -0.3 499,386 + -0.3 499,387 - -0.2 499,524 + UW163_RS02370 0.30 -0.6 499,524 + UW163_RS02370 0.30 -0.1 499,525 - +0.0 499,590 + UW163_RS02370 0.41 -0.0 499,925 - +0.2 500,377 + +0.3 500,664 + UW163_RS02380 0.14 -0.5 500,683 - UW163_RS02380 0.15 -0.3 500,997 + UW163_RS02380 0.31 +0.0 500,997 + UW163_RS02380 0.31 -0.0 500,998 - UW163_RS02380 0.31 +0.6 501,063 + UW163_RS02380 0.34 +0.1 501,064 - UW163_RS02380 0.34 -0.5
Or see this region's nucleotide sequence