Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4271

Experiment: M9 with sucrose and trichloroethylene 76.3 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_4269 and EX28DRAFT_4270 are separated by 108 nucleotidesEX28DRAFT_4270 and EX28DRAFT_4271 are separated by 154 nucleotidesEX28DRAFT_4271 and EX28DRAFT_4272 are separated by 118 nucleotides EX28DRAFT_4269: EX28DRAFT_4269 - SOS regulatory protein LexA, at 73,348 to 73,956 _4269 EX28DRAFT_4270: EX28DRAFT_4270 - Diacylglycerol kinase, at 74,065 to 74,433 _4270 EX28DRAFT_4271: EX28DRAFT_4271 - glycerol-3-phosphate acyltransferase (EC 2.3.1.15), at 74,588 to 77,008 _4271 EX28DRAFT_4272: EX28DRAFT_4272 - gluconate transporter, at 77,127 to 78,467 _4272 Position (kb) 74 75 76 77 78Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 74.048 kb on + strandat 74.048 kb on + strandat 74.048 kb on + strandat 74.048 kb on + strandat 74.053 kb on - strandat 74.230 kb on + strand, within EX28DRAFT_4270at 74.502 kb on + strandat 74.503 kb on - strandat 74.562 kb on + strandat 76.723 kb on + strand, within EX28DRAFT_4271at 76.960 kb on + strandat 76.961 kb on - strandat 77.059 kb on + strandat 77.060 kb on - strandat 77.060 kb on - strandat 77.062 kb on + strandat 77.063 kb on - strandat 77.063 kb on - strandat 77.064 kb on + strandat 77.064 kb on + strandat 77.064 kb on + strandat 77.064 kb on + strandat 77.064 kb on + strandat 77.064 kb on + strandat 77.064 kb on + strandat 77.065 kb on - strandat 77.114 kb on + strandat 77.115 kb on - strandat 77.141 kb on + strandat 77.141 kb on + strandat 77.142 kb on - strandat 77.207 kb on + strandat 77.306 kb on + strand, within EX28DRAFT_4272at 77.306 kb on + strand, within EX28DRAFT_4272at 77.335 kb on + strand, within EX28DRAFT_4272at 77.411 kb on + strand, within EX28DRAFT_4272at 77.552 kb on + strand, within EX28DRAFT_4272at 77.843 kb on + strand, within EX28DRAFT_4272at 77.844 kb on - strand, within EX28DRAFT_4272at 77.894 kb on + strand, within EX28DRAFT_4272

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM
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74,048 + -0.6
74,048 + +0.3
74,048 + -0.4
74,048 + +0.8
74,053 - -1.2
74,230 + EX28DRAFT_4270 0.45 +1.9
74,502 + -1.7
74,503 - -0.1
74,562 + -0.4
76,723 + EX28DRAFT_4271 0.88 -1.1
76,960 + +0.5
76,961 - -0.7
77,059 + -0.7
77,060 - -0.1
77,060 - +0.3
77,062 + +0.3
77,063 - -0.3
77,063 - +2.2
77,064 + +0.6
77,064 + +0.3
77,064 + +0.3
77,064 + +0.1
77,064 + +0.6
77,064 + +0.3
77,064 + -0.4
77,065 - +0.9
77,114 + +0.6
77,115 - -0.0
77,141 + +1.2
77,141 + -3.7
77,142 - -0.2
77,207 + +0.1
77,306 + EX28DRAFT_4272 0.13 -1.0
77,306 + EX28DRAFT_4272 0.13 -0.2
77,335 + EX28DRAFT_4272 0.16 -0.1
77,411 + EX28DRAFT_4272 0.21 +0.4
77,552 + EX28DRAFT_4272 0.32 -0.0
77,843 + EX28DRAFT_4272 0.53 -0.9
77,844 - EX28DRAFT_4272 0.53 +0.2
77,894 + EX28DRAFT_4272 0.57 -0.0

Or see this region's nucleotide sequence