Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3422 and EX28DRAFT_3423 are separated by 41 nucleotides EX28DRAFT_3423 and EX28DRAFT_3424 are separated by 332 nucleotides EX28DRAFT_3424 and EX28DRAFT_3425 are separated by 10 nucleotides
EX28DRAFT_3422: EX28DRAFT_3422 - Predicted Zn-dependent proteases and their inactivated homologs, at 93,672 to 95,024
_3422
EX28DRAFT_3423: EX28DRAFT_3423 - Soluble cytochrome b562, at 95,066 to 95,452
_3423
EX28DRAFT_3424: EX28DRAFT_3424 - PRD domain protein EF_0829/AHA_3910, at 95,785 to 96,105
_3424
EX28DRAFT_3425: EX28DRAFT_3425 - conserved hypothetical protein EF_0830/AHA_3911, at 96,116 to 96,478
_3425
Position (kb)
95
96 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 94.170 kb on + strand, within EX28DRAFT_3422 at 94.284 kb on + strand, within EX28DRAFT_3422 at 94.665 kb on + strand, within EX28DRAFT_3422 at 94.934 kb on + strand at 94.968 kb on - strand at 94.973 kb on + strand at 94.974 kb on - strand at 94.975 kb on + strand at 94.975 kb on + strand at 94.975 kb on + strand at 94.975 kb on + strand at 94.975 kb on + strand at 94.975 kb on + strand at 94.975 kb on + strand at 94.975 kb on + strand at 94.975 kb on + strand at 94.975 kb on + strand at 94.976 kb on - strand at 94.976 kb on - strand at 94.976 kb on - strand at 94.976 kb on - strand at 94.976 kb on - strand at 94.976 kb on - strand at 94.991 kb on - strand at 95.025 kb on + strand at 95.042 kb on + strand at 95.042 kb on + strand at 95.313 kb on - strand, within EX28DRAFT_3423 at 95.368 kb on + strand, within EX28DRAFT_3423 at 95.516 kb on - strand at 95.519 kb on + strand at 95.520 kb on - strand at 95.597 kb on + strand at 95.629 kb on - strand at 95.648 kb on + strand at 95.649 kb on - strand at 95.649 kb on - strand at 95.708 kb on + strand at 95.835 kb on + strand, within EX28DRAFT_3424 at 95.835 kb on + strand, within EX28DRAFT_3424 at 95.835 kb on + strand, within EX28DRAFT_3424 at 95.851 kb on + strand, within EX28DRAFT_3424 at 95.851 kb on + strand, within EX28DRAFT_3424 at 95.891 kb on + strand, within EX28DRAFT_3424 at 96.127 kb on + strand at 96.128 kb on - strand at 96.326 kb on + strand, within EX28DRAFT_3425 at 96.333 kb on - strand, within EX28DRAFT_3425 at 96.333 kb on - strand, within EX28DRAFT_3425 at 96.344 kb on + strand, within EX28DRAFT_3425 at 96.415 kb on + strand, within EX28DRAFT_3425 at 96.447 kb on + strand at 96.448 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 94,170 + EX28DRAFT_3422 0.37 -0.1 94,284 + EX28DRAFT_3422 0.45 -1.4 94,665 + EX28DRAFT_3422 0.73 +0.8 94,934 + -1.6 94,968 - +0.1 94,973 + -1.3 94,974 - -0.0 94,975 + +0.0 94,975 + -0.3 94,975 + -0.1 94,975 + -0.0 94,975 + +1.3 94,975 + +0.3 94,975 + -0.3 94,975 + -0.0 94,975 + -0.8 94,975 + +0.3 94,976 - +0.8 94,976 - +0.2 94,976 - +0.7 94,976 - -0.2 94,976 - -1.1 94,976 - +0.6 94,991 - +1.8 95,025 + -1.1 95,042 + +0.2 95,042 + +0.4 95,313 - EX28DRAFT_3423 0.64 -0.9 95,368 + EX28DRAFT_3423 0.78 -0.8 95,516 - -2.1 95,519 + +1.8 95,520 - -0.1 95,597 + -0.2 95,629 - +0.0 95,648 + -0.1 95,649 - -0.3 95,649 - -0.1 95,708 + -0.4 95,835 + EX28DRAFT_3424 0.16 +0.8 95,835 + EX28DRAFT_3424 0.16 -1.1 95,835 + EX28DRAFT_3424 0.16 -0.1 95,851 + EX28DRAFT_3424 0.21 -0.1 95,851 + EX28DRAFT_3424 0.21 -0.1 95,891 + EX28DRAFT_3424 0.33 +0.1 96,127 + -0.2 96,128 - -2.0 96,326 + EX28DRAFT_3425 0.58 -0.2 96,333 - EX28DRAFT_3425 0.60 -2.8 96,333 - EX28DRAFT_3425 0.60 +0.4 96,344 + EX28DRAFT_3425 0.63 -0.5 96,415 + EX28DRAFT_3425 0.82 -0.2 96,447 + +2.7 96,448 - +0.3
Or see this region's nucleotide sequence