Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3275 and EX28DRAFT_3276 are separated by 9 nucleotides EX28DRAFT_3276 and EX28DRAFT_3277 are separated by 29 nucleotides EX28DRAFT_3277 and EX28DRAFT_3278 overlap by 1 nucleotides
EX28DRAFT_3275: EX28DRAFT_3275 - Glutamate synthase domain 2, at 569,807 to 574,267
_3275
EX28DRAFT_3276: EX28DRAFT_3276 - glutamate synthase small subunit family protein, proteobacterial, at 574,277 to 575,695
_3276
EX28DRAFT_3277: EX28DRAFT_3277 - Stringent starvation protein B, at 575,725 to 576,228
_3277
EX28DRAFT_3278: EX28DRAFT_3278 - Glutathione S-transferase, at 576,228 to 576,866
_3278
Position (kb) 574
575
576 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 573.405 kb on - strand, within EX28DRAFT_3275 at 573.456 kb on + strand, within EX28DRAFT_3275 at 573.476 kb on + strand, within EX28DRAFT_3275 at 573.696 kb on - strand, within EX28DRAFT_3275 at 573.859 kb on + strand at 573.860 kb on - strand at 573.911 kb on + strand at 573.911 kb on + strand at 573.990 kb on - strand at 574.290 kb on + strand at 574.291 kb on - strand at 574.291 kb on - strand at 574.291 kb on - strand at 574.291 kb on - strand at 574.293 kb on - strand at 574.467 kb on - strand, within EX28DRAFT_3276 at 574.651 kb on + strand, within EX28DRAFT_3276 at 574.651 kb on + strand, within EX28DRAFT_3276 at 575.001 kb on - strand, within EX28DRAFT_3276 at 575.229 kb on - strand, within EX28DRAFT_3276 at 575.347 kb on + strand, within EX28DRAFT_3276 at 575.681 kb on + strand at 575.820 kb on + strand, within EX28DRAFT_3277 at 575.820 kb on + strand, within EX28DRAFT_3277 at 575.821 kb on - strand, within EX28DRAFT_3277 at 575.894 kb on + strand, within EX28DRAFT_3277 at 575.942 kb on + strand, within EX28DRAFT_3277 at 575.943 kb on - strand, within EX28DRAFT_3277 at 575.943 kb on - strand, within EX28DRAFT_3277 at 575.946 kb on + strand, within EX28DRAFT_3277 at 575.946 kb on + strand, within EX28DRAFT_3277 at 576.170 kb on + strand, within EX28DRAFT_3277 at 576.170 kb on + strand, within EX28DRAFT_3277 at 576.308 kb on + strand, within EX28DRAFT_3278 at 576.309 kb on - strand, within EX28DRAFT_3278 at 576.311 kb on - strand, within EX28DRAFT_3278 at 576.349 kb on - strand, within EX28DRAFT_3278
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 573,405 - EX28DRAFT_3275 0.81 -3.9 573,456 + EX28DRAFT_3275 0.82 -1.6 573,476 + EX28DRAFT_3275 0.82 -1.4 573,696 - EX28DRAFT_3275 0.87 -3.1 573,859 + -2.5 573,860 - -1.7 573,911 + -2.9 573,911 + -1.0 573,990 - -1.0 574,290 + -1.1 574,291 - -2.8 574,291 - -4.3 574,291 - -0.5 574,291 - -1.5 574,293 - -3.1 574,467 - EX28DRAFT_3276 0.13 -1.3 574,651 + EX28DRAFT_3276 0.26 -2.8 574,651 + EX28DRAFT_3276 0.26 -2.2 575,001 - EX28DRAFT_3276 0.51 -1.9 575,229 - EX28DRAFT_3276 0.67 -2.8 575,347 + EX28DRAFT_3276 0.75 -3.2 575,681 + -1.4 575,820 + EX28DRAFT_3277 0.19 -0.4 575,820 + EX28DRAFT_3277 0.19 +1.2 575,821 - EX28DRAFT_3277 0.19 -2.9 575,894 + EX28DRAFT_3277 0.34 +0.0 575,942 + EX28DRAFT_3277 0.43 +0.1 575,943 - EX28DRAFT_3277 0.43 +0.1 575,943 - EX28DRAFT_3277 0.43 +0.1 575,946 + EX28DRAFT_3277 0.44 +1.4 575,946 + EX28DRAFT_3277 0.44 -1.1 576,170 + EX28DRAFT_3277 0.88 +0.1 576,170 + EX28DRAFT_3277 0.88 +0.4 576,308 + EX28DRAFT_3278 0.13 +1.1 576,309 - EX28DRAFT_3278 0.13 +0.0 576,311 - EX28DRAFT_3278 0.13 -1.6 576,349 - EX28DRAFT_3278 0.19 +0.3
Or see this region's nucleotide sequence