Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1577 and EX28DRAFT_1578 are separated by 77 nucleotides EX28DRAFT_1578 and EX28DRAFT_1579 are separated by 940 nucleotides
EX28DRAFT_1577: EX28DRAFT_1577 - Terminase small subunit, at 1,591,703 to 1,592,692
_1577
EX28DRAFT_1578: EX28DRAFT_1578 - GnsA/GnsB family, at 1,592,770 to 1,592,943
_1578
EX28DRAFT_1579: EX28DRAFT_1579 - Bacteriophage Rz lysis protein, at 1,593,884 to 1,594,345
_1579
Position (kb)
1592
1593 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1591.877 kb on - strand, within EX28DRAFT_1577 at 1592.020 kb on - strand, within EX28DRAFT_1577 at 1592.333 kb on - strand, within EX28DRAFT_1577 at 1592.333 kb on - strand, within EX28DRAFT_1577 at 1592.348 kb on - strand, within EX28DRAFT_1577 at 1592.374 kb on - strand, within EX28DRAFT_1577 at 1592.388 kb on + strand, within EX28DRAFT_1577 at 1592.557 kb on + strand, within EX28DRAFT_1577 at 1592.557 kb on + strand, within EX28DRAFT_1577 at 1592.571 kb on + strand, within EX28DRAFT_1577 at 1592.571 kb on + strand, within EX28DRAFT_1577 at 1592.572 kb on - strand, within EX28DRAFT_1577 at 1592.572 kb on - strand, within EX28DRAFT_1577 at 1592.589 kb on + strand, within EX28DRAFT_1577 at 1592.590 kb on - strand, within EX28DRAFT_1577 at 1592.593 kb on + strand, within EX28DRAFT_1577 at 1592.723 kb on - strand at 1592.772 kb on - strand at 1592.944 kb on + strand at 1592.983 kb on + strand at 1592.984 kb on - strand at 1592.997 kb on + strand at 1592.997 kb on + strand at 1592.997 kb on + strand at 1592.998 kb on - strand at 1592.998 kb on - strand at 1593.017 kb on + strand at 1593.024 kb on - strand at 1593.024 kb on - strand at 1593.024 kb on - strand at 1593.027 kb on + strand at 1593.027 kb on + strand at 1593.039 kb on + strand at 1593.145 kb on - strand at 1593.145 kb on - strand at 1593.195 kb on + strand at 1593.273 kb on + strand at 1593.318 kb on + strand at 1593.318 kb on + strand at 1593.319 kb on - strand at 1593.406 kb on + strand at 1593.422 kb on + strand at 1593.422 kb on + strand at 1593.423 kb on - strand at 1593.423 kb on - strand at 1593.462 kb on - strand at 1593.462 kb on - strand at 1593.479 kb on + strand at 1593.480 kb on - strand at 1593.573 kb on - strand at 1593.584 kb on + strand at 1593.584 kb on + strand at 1593.584 kb on + strand at 1593.584 kb on + strand at 1593.588 kb on + strand at 1593.589 kb on - strand at 1593.606 kb on + strand at 1593.606 kb on + strand at 1593.606 kb on + strand at 1593.657 kb on + strand at 1593.766 kb on + strand at 1593.766 kb on + strand at 1593.826 kb on + strand at 1593.826 kb on + strand at 1593.886 kb on - strand at 1593.893 kb on - strand at 1593.909 kb on + strand at 1593.909 kb on + strand at 1593.910 kb on - strand at 1593.910 kb on - strand at 1593.910 kb on - strand at 1593.922 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 1,591,877 - EX28DRAFT_1577 0.18 -0.0 1,592,020 - EX28DRAFT_1577 0.32 +0.3 1,592,333 - EX28DRAFT_1577 0.64 -1.6 1,592,333 - EX28DRAFT_1577 0.64 +0.2 1,592,348 - EX28DRAFT_1577 0.65 -4.0 1,592,374 - EX28DRAFT_1577 0.68 -2.4 1,592,388 + EX28DRAFT_1577 0.69 -0.1 1,592,557 + EX28DRAFT_1577 0.86 -0.0 1,592,557 + EX28DRAFT_1577 0.86 +1.3 1,592,571 + EX28DRAFT_1577 0.88 -0.3 1,592,571 + EX28DRAFT_1577 0.88 -2.1 1,592,572 - EX28DRAFT_1577 0.88 -1.1 1,592,572 - EX28DRAFT_1577 0.88 -1.2 1,592,589 + EX28DRAFT_1577 0.89 +0.8 1,592,590 - EX28DRAFT_1577 0.90 +0.5 1,592,593 + EX28DRAFT_1577 0.90 -0.3 1,592,723 - -0.6 1,592,772 - +1.2 1,592,944 + +0.3 1,592,983 + +0.5 1,592,984 - +0.9 1,592,997 + +0.7 1,592,997 + +0.4 1,592,997 + +0.0 1,592,998 - -0.3 1,592,998 - +0.3 1,593,017 + +0.5 1,593,024 - -0.0 1,593,024 - +0.5 1,593,024 - +0.5 1,593,027 + -0.3 1,593,027 + +0.6 1,593,039 + -0.6 1,593,145 - +0.3 1,593,145 - -0.5 1,593,195 + -2.9 1,593,273 + -0.0 1,593,318 + +0.5 1,593,318 + -0.7 1,593,319 - +0.4 1,593,406 + -2.2 1,593,422 + -2.9 1,593,422 + -1.8 1,593,423 - -2.9 1,593,423 - -0.8 1,593,462 - +0.1 1,593,462 - -1.3 1,593,479 + +0.5 1,593,480 - +0.6 1,593,573 - -1.2 1,593,584 + +0.7 1,593,584 + +2.2 1,593,584 + -1.6 1,593,584 + +0.7 1,593,588 + +0.1 1,593,589 - +0.7 1,593,606 + -0.4 1,593,606 + -0.2 1,593,606 + -1.2 1,593,657 + -0.7 1,593,766 + -0.2 1,593,766 + -0.0 1,593,826 + -0.6 1,593,826 + -3.4 1,593,886 - +0.2 1,593,893 - +1.2 1,593,909 + +0.1 1,593,909 + +0.3 1,593,910 - +2.0 1,593,910 - -0.8 1,593,910 - -1.7 1,593,922 - +2.0
Or see this region's nucleotide sequence