Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0436 and EX28DRAFT_0437 overlap by 7 nucleotides EX28DRAFT_0437 and EX28DRAFT_0438 are separated by 46 nucleotides EX28DRAFT_0438 and EX28DRAFT_0439 are separated by 106 nucleotides
EX28DRAFT_0436: EX28DRAFT_0436 - Putative regulator of cell autolysis, at 416,356 to 418,041
_0436
EX28DRAFT_0437: EX28DRAFT_0437 - two component transcriptional regulator, LytTR family, at 418,035 to 418,754
_0437
EX28DRAFT_0438: EX28DRAFT_0438 - Uncharacterized protein conserved in bacteria, at 418,801 to 419,271
_0438
EX28DRAFT_0439: EX28DRAFT_0439 - methionyl-tRNA synthetase (EC 6.1.1.10), at 419,378 to 421,411
_0439
Position (kb) 418
419
420 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 417.873 kb on + strand at 417.873 kb on + strand at 417.886 kb on + strand at 418.010 kb on + strand at 418.039 kb on + strand at 418.039 kb on + strand at 418.112 kb on + strand, within EX28DRAFT_0437 at 418.113 kb on - strand, within EX28DRAFT_0437 at 418.115 kb on - strand, within EX28DRAFT_0437 at 418.330 kb on + strand, within EX28DRAFT_0437 at 418.331 kb on - strand, within EX28DRAFT_0437 at 418.471 kb on - strand, within EX28DRAFT_0437 at 418.800 kb on + strand at 418.800 kb on + strand at 418.801 kb on - strand at 418.805 kb on + strand at 418.805 kb on + strand at 418.810 kb on - strand at 418.855 kb on - strand, within EX28DRAFT_0438 at 418.996 kb on + strand, within EX28DRAFT_0438 at 418.997 kb on - strand, within EX28DRAFT_0438 at 419.224 kb on - strand, within EX28DRAFT_0438 at 419.361 kb on - strand at 419.361 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 417,873 + -0.0 417,873 + -0.2 417,886 + +0.0 418,010 + +0.6 418,039 + -0.1 418,039 + +0.7 418,112 + EX28DRAFT_0437 0.11 +0.0 418,113 - EX28DRAFT_0437 0.11 +0.3 418,115 - EX28DRAFT_0437 0.11 +2.7 418,330 + EX28DRAFT_0437 0.41 +1.2 418,331 - EX28DRAFT_0437 0.41 +1.7 418,471 - EX28DRAFT_0437 0.61 -1.2 418,800 + +1.6 418,800 + -0.1 418,801 - -0.6 418,805 + +1.2 418,805 + -0.7 418,810 - +0.0 418,855 - EX28DRAFT_0438 0.11 -1.0 418,996 + EX28DRAFT_0438 0.41 -1.1 418,997 - EX28DRAFT_0438 0.42 -0.3 419,224 - EX28DRAFT_0438 0.90 -1.1 419,361 - -3.0 419,361 - -1.2
Or see this region's nucleotide sequence