Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0398 and EX28DRAFT_0399 are separated by 97 nucleotides EX28DRAFT_0399 and EX28DRAFT_0400 are separated by 180 nucleotides
EX28DRAFT_0398: EX28DRAFT_0398 - conserved hypothetical integral membrane protein, at 372,874 to 373,920
_0398
EX28DRAFT_0399: EX28DRAFT_0399 - Transcriptional regulator, at 374,018 to 374,884
_0399
EX28DRAFT_0400: EX28DRAFT_0400 - Amino acid transporters, at 375,065 to 376,534
_0400
Position (kb) 374
375 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 373.092 kb on + strand, within EX28DRAFT_0398 at 373.092 kb on + strand, within EX28DRAFT_0398 at 373.098 kb on + strand, within EX28DRAFT_0398 at 373.179 kb on + strand, within EX28DRAFT_0398 at 373.325 kb on + strand, within EX28DRAFT_0398 at 373.325 kb on + strand, within EX28DRAFT_0398 at 373.325 kb on + strand, within EX28DRAFT_0398 at 373.325 kb on + strand, within EX28DRAFT_0398 at 373.326 kb on - strand, within EX28DRAFT_0398 at 373.326 kb on - strand, within EX28DRAFT_0398 at 373.326 kb on - strand, within EX28DRAFT_0398 at 373.370 kb on + strand, within EX28DRAFT_0398 at 373.371 kb on - strand, within EX28DRAFT_0398 at 373.371 kb on - strand, within EX28DRAFT_0398 at 373.371 kb on - strand, within EX28DRAFT_0398 at 373.732 kb on - strand, within EX28DRAFT_0398 at 373.746 kb on + strand, within EX28DRAFT_0398 at 373.746 kb on + strand, within EX28DRAFT_0398 at 373.750 kb on + strand, within EX28DRAFT_0398 at 373.891 kb on - strand at 373.903 kb on + strand at 373.904 kb on - strand at 373.904 kb on - strand at 373.921 kb on - strand at 373.983 kb on + strand at 374.217 kb on - strand, within EX28DRAFT_0399 at 374.321 kb on + strand, within EX28DRAFT_0399 at 374.321 kb on + strand, within EX28DRAFT_0399 at 374.322 kb on - strand, within EX28DRAFT_0399 at 374.882 kb on + strand at 374.883 kb on - strand at 374.943 kb on - strand at 374.950 kb on - strand at 374.950 kb on - strand at 374.950 kb on - strand at 374.950 kb on - strand at 374.954 kb on - strand at 374.955 kb on + strand at 374.986 kb on - strand at 375.025 kb on + strand at 375.026 kb on - strand at 375.045 kb on + strand at 375.102 kb on + strand at 375.103 kb on - strand at 375.227 kb on + strand, within EX28DRAFT_0400 at 375.228 kb on - strand, within EX28DRAFT_0400 at 375.230 kb on - strand, within EX28DRAFT_0400 at 375.287 kb on + strand, within EX28DRAFT_0400 at 375.317 kb on + strand, within EX28DRAFT_0400 at 375.369 kb on - strand, within EX28DRAFT_0400 at 375.374 kb on + strand, within EX28DRAFT_0400 at 375.500 kb on + strand, within EX28DRAFT_0400 at 375.501 kb on - strand, within EX28DRAFT_0400 at 375.501 kb on - strand, within EX28DRAFT_0400 at 375.501 kb on - strand, within EX28DRAFT_0400 at 375.798 kb on + strand, within EX28DRAFT_0400 at 375.821 kb on + strand, within EX28DRAFT_0400 at 375.821 kb on + strand, within EX28DRAFT_0400 at 375.821 kb on + strand, within EX28DRAFT_0400 at 375.822 kb on - strand, within EX28DRAFT_0400 at 375.822 kb on - strand, within EX28DRAFT_0400
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 373,092 + EX28DRAFT_0398 0.21 -0.3 373,092 + EX28DRAFT_0398 0.21 -0.8 373,098 + EX28DRAFT_0398 0.21 -0.3 373,179 + EX28DRAFT_0398 0.29 +0.0 373,325 + EX28DRAFT_0398 0.43 -0.2 373,325 + EX28DRAFT_0398 0.43 +0.2 373,325 + EX28DRAFT_0398 0.43 +0.5 373,325 + EX28DRAFT_0398 0.43 -0.1 373,326 - EX28DRAFT_0398 0.43 +0.3 373,326 - EX28DRAFT_0398 0.43 +0.6 373,326 - EX28DRAFT_0398 0.43 +0.0 373,370 + EX28DRAFT_0398 0.47 +0.4 373,371 - EX28DRAFT_0398 0.47 +0.1 373,371 - EX28DRAFT_0398 0.47 -4.1 373,371 - EX28DRAFT_0398 0.47 -0.1 373,732 - EX28DRAFT_0398 0.82 -0.2 373,746 + EX28DRAFT_0398 0.83 -3.6 373,746 + EX28DRAFT_0398 0.83 -0.6 373,750 + EX28DRAFT_0398 0.84 -0.9 373,891 - -1.2 373,903 + +0.6 373,904 - +0.5 373,904 - +0.1 373,921 - -2.2 373,983 + +0.7 374,217 - EX28DRAFT_0399 0.23 -1.4 374,321 + EX28DRAFT_0399 0.35 -0.5 374,321 + EX28DRAFT_0399 0.35 -2.2 374,322 - EX28DRAFT_0399 0.35 -0.2 374,882 + +0.3 374,883 - -0.3 374,943 - -1.2 374,950 - -0.9 374,950 - +0.5 374,950 - +0.9 374,950 - -0.8 374,954 - +0.2 374,955 + +0.9 374,986 - +0.6 375,025 + -1.0 375,026 - -0.2 375,045 + +1.4 375,102 + +0.4 375,103 - +1.9 375,227 + EX28DRAFT_0400 0.11 +0.9 375,228 - EX28DRAFT_0400 0.11 -0.2 375,230 - EX28DRAFT_0400 0.11 +0.5 375,287 + EX28DRAFT_0400 0.15 +0.1 375,317 + EX28DRAFT_0400 0.17 +0.3 375,369 - EX28DRAFT_0400 0.21 +0.0 375,374 + EX28DRAFT_0400 0.21 -1.4 375,500 + EX28DRAFT_0400 0.30 -0.1 375,501 - EX28DRAFT_0400 0.30 -2.9 375,501 - EX28DRAFT_0400 0.30 -1.8 375,501 - EX28DRAFT_0400 0.30 -0.3 375,798 + EX28DRAFT_0400 0.50 -0.5 375,821 + EX28DRAFT_0400 0.51 +0.8 375,821 + EX28DRAFT_0400 0.51 +0.1 375,821 + EX28DRAFT_0400 0.51 -3.6 375,822 - EX28DRAFT_0400 0.51 +0.9 375,822 - EX28DRAFT_0400 0.51 +1.4
Or see this region's nucleotide sequence