Experiment: M9 with sucrose and trichloroethylene 76.3 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0347 and EX28DRAFT_0348 overlap by 4 nucleotides EX28DRAFT_0348 and EX28DRAFT_0349 overlap by 11 nucleotides
EX28DRAFT_0347: EX28DRAFT_0347 - glycerol-3-phosphate dehydrogenase, anaerobic, C subunit, at 309,611 to 310,801
_0347
EX28DRAFT_0348: EX28DRAFT_0348 - glycerol-3-phosphate dehydrogenase, anaerobic, B subunit, at 310,798 to 312,015
_0348
EX28DRAFT_0349: EX28DRAFT_0349 - glycerol-3-phosphate dehydrogenase, anaerobic, A subunit, at 312,005 to 313,633
_0349
Position (kb) 310
311
312
313 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 309.854 kb on + strand, within EX28DRAFT_0347 at 309.874 kb on + strand, within EX28DRAFT_0347 at 309.876 kb on + strand, within EX28DRAFT_0347 at 309.877 kb on - strand, within EX28DRAFT_0347 at 309.902 kb on - strand, within EX28DRAFT_0347 at 309.918 kb on + strand, within EX28DRAFT_0347 at 310.070 kb on - strand, within EX28DRAFT_0347 at 310.163 kb on - strand, within EX28DRAFT_0347 at 310.284 kb on + strand, within EX28DRAFT_0347 at 310.284 kb on + strand, within EX28DRAFT_0347 at 310.284 kb on + strand, within EX28DRAFT_0347 at 310.294 kb on - strand, within EX28DRAFT_0347 at 310.326 kb on + strand, within EX28DRAFT_0347 at 310.384 kb on - strand, within EX28DRAFT_0347 at 310.409 kb on + strand, within EX28DRAFT_0347 at 310.409 kb on + strand, within EX28DRAFT_0347 at 310.410 kb on - strand, within EX28DRAFT_0347 at 310.657 kb on - strand, within EX28DRAFT_0347 at 310.772 kb on - strand at 310.841 kb on + strand at 310.842 kb on - strand at 310.842 kb on - strand at 310.842 kb on - strand at 310.929 kb on + strand, within EX28DRAFT_0348 at 311.067 kb on + strand, within EX28DRAFT_0348 at 311.139 kb on + strand, within EX28DRAFT_0348 at 311.140 kb on - strand, within EX28DRAFT_0348 at 311.140 kb on - strand, within EX28DRAFT_0348 at 311.161 kb on - strand, within EX28DRAFT_0348 at 311.444 kb on + strand, within EX28DRAFT_0348 at 311.444 kb on + strand, within EX28DRAFT_0348 at 311.628 kb on + strand, within EX28DRAFT_0348 at 311.701 kb on + strand, within EX28DRAFT_0348 at 311.808 kb on + strand, within EX28DRAFT_0348 at 311.809 kb on - strand, within EX28DRAFT_0348 at 311.809 kb on - strand, within EX28DRAFT_0348 at 311.831 kb on + strand, within EX28DRAFT_0348 at 312.052 kb on - strand at 312.172 kb on + strand, within EX28DRAFT_0349 at 312.173 kb on - strand, within EX28DRAFT_0349 at 312.561 kb on + strand, within EX28DRAFT_0349 at 312.593 kb on - strand, within EX28DRAFT_0349 at 312.702 kb on + strand, within EX28DRAFT_0349 at 312.702 kb on + strand, within EX28DRAFT_0349 at 312.836 kb on + strand, within EX28DRAFT_0349 at 312.836 kb on + strand, within EX28DRAFT_0349 at 312.836 kb on + strand, within EX28DRAFT_0349 at 312.837 kb on - strand, within EX28DRAFT_0349 at 312.837 kb on - strand, within EX28DRAFT_0349
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose and trichloroethylene 76.3 uM remove 309,854 + EX28DRAFT_0347 0.20 +0.4 309,874 + EX28DRAFT_0347 0.22 -0.0 309,876 + EX28DRAFT_0347 0.22 -1.0 309,877 - EX28DRAFT_0347 0.22 -0.1 309,902 - EX28DRAFT_0347 0.24 +0.9 309,918 + EX28DRAFT_0347 0.26 +2.4 310,070 - EX28DRAFT_0347 0.39 +0.1 310,163 - EX28DRAFT_0347 0.46 +1.7 310,284 + EX28DRAFT_0347 0.57 +0.9 310,284 + EX28DRAFT_0347 0.57 +0.4 310,284 + EX28DRAFT_0347 0.57 +0.4 310,294 - EX28DRAFT_0347 0.57 +0.0 310,326 + EX28DRAFT_0347 0.60 -0.8 310,384 - EX28DRAFT_0347 0.65 -1.0 310,409 + EX28DRAFT_0347 0.67 +0.7 310,409 + EX28DRAFT_0347 0.67 -0.1 310,410 - EX28DRAFT_0347 0.67 -0.3 310,657 - EX28DRAFT_0347 0.88 +0.1 310,772 - -1.5 310,841 + +0.5 310,842 - -3.0 310,842 - -0.0 310,842 - +0.8 310,929 + EX28DRAFT_0348 0.11 -0.0 311,067 + EX28DRAFT_0348 0.22 -0.5 311,139 + EX28DRAFT_0348 0.28 -0.7 311,140 - EX28DRAFT_0348 0.28 +0.6 311,140 - EX28DRAFT_0348 0.28 -1.1 311,161 - EX28DRAFT_0348 0.30 -0.4 311,444 + EX28DRAFT_0348 0.53 +0.3 311,444 + EX28DRAFT_0348 0.53 +0.0 311,628 + EX28DRAFT_0348 0.68 +1.3 311,701 + EX28DRAFT_0348 0.74 +0.5 311,808 + EX28DRAFT_0348 0.83 -2.8 311,809 - EX28DRAFT_0348 0.83 -1.0 311,809 - EX28DRAFT_0348 0.83 -0.2 311,831 + EX28DRAFT_0348 0.85 +0.5 312,052 - +0.0 312,172 + EX28DRAFT_0349 0.10 -1.7 312,173 - EX28DRAFT_0349 0.10 +0.7 312,561 + EX28DRAFT_0349 0.34 +0.3 312,593 - EX28DRAFT_0349 0.36 +0.5 312,702 + EX28DRAFT_0349 0.43 +0.4 312,702 + EX28DRAFT_0349 0.43 +0.7 312,836 + EX28DRAFT_0349 0.51 +0.1 312,836 + EX28DRAFT_0349 0.51 +0.5 312,836 + EX28DRAFT_0349 0.51 -0.0 312,837 - EX28DRAFT_0349 0.51 -0.7 312,837 - EX28DRAFT_0349 0.51 -0.3
Or see this region's nucleotide sequence