Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20310 and CA264_20315 are separated by 236 nucleotides CA264_20315 and CA264_20320 are separated by 166 nucleotides CA264_20320 and CA264_20325 are separated by 72 nucleotides
CA264_20310: CA264_20310 - TVP38/TMEM64 family protein, at 4,680,347 to 4,681,069
_20310
CA264_20315: CA264_20315 - cystathionine gamma-synthase, at 4,681,306 to 4,682,445
_20315
CA264_20320: CA264_20320 - hypothetical protein, at 4,682,612 to 4,683,136
_20320
CA264_20325: CA264_20325 - cell envelope biogenesis protein OmpA, at 4,683,209 to 4,683,919
_20325
Position (kb)
4681
4682
4683 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4680.677 kb on + strand, within CA264_20310 at 4680.678 kb on - strand, within CA264_20310 at 4680.763 kb on - strand, within CA264_20310 at 4680.786 kb on + strand, within CA264_20310 at 4680.854 kb on - strand, within CA264_20310 at 4680.890 kb on - strand, within CA264_20310 at 4680.946 kb on - strand, within CA264_20310 at 4680.957 kb on - strand, within CA264_20310 at 4680.959 kb on + strand, within CA264_20310 at 4680.959 kb on + strand, within CA264_20310 at 4680.960 kb on - strand, within CA264_20310 at 4680.960 kb on - strand, within CA264_20310 at 4681.140 kb on - strand at 4681.151 kb on + strand at 4681.205 kb on + strand at 4681.243 kb on + strand at 4681.244 kb on - strand at 4681.244 kb on - strand at 4681.245 kb on + strand at 4681.245 kb on + strand at 4681.246 kb on - strand at 4681.288 kb on - strand at 4681.288 kb on - strand at 4681.288 kb on - strand at 4681.292 kb on - strand at 4681.294 kb on - strand at 4681.327 kb on - strand at 4681.377 kb on + strand at 4681.377 kb on + strand at 4681.381 kb on + strand at 4681.382 kb on - strand at 4681.396 kb on + strand at 4681.397 kb on - strand at 4681.397 kb on - strand at 4681.429 kb on + strand, within CA264_20315 at 4681.598 kb on - strand, within CA264_20315 at 4681.635 kb on + strand, within CA264_20315 at 4681.635 kb on + strand, within CA264_20315 at 4681.636 kb on - strand, within CA264_20315 at 4681.639 kb on + strand, within CA264_20315 at 4681.640 kb on - strand, within CA264_20315 at 4681.647 kb on + strand, within CA264_20315 at 4681.785 kb on + strand, within CA264_20315 at 4681.786 kb on - strand, within CA264_20315 at 4681.835 kb on - strand, within CA264_20315 at 4681.891 kb on + strand, within CA264_20315 at 4681.913 kb on + strand, within CA264_20315 at 4681.914 kb on - strand, within CA264_20315 at 4682.123 kb on - strand, within CA264_20315 at 4682.478 kb on + strand at 4682.478 kb on + strand at 4682.479 kb on - strand at 4682.504 kb on - strand at 4682.568 kb on + strand at 4682.569 kb on - strand at 4682.578 kb on + strand at 4682.592 kb on - strand at 4682.611 kb on - strand at 4682.633 kb on + strand at 4682.696 kb on - strand, within CA264_20320 at 4682.773 kb on + strand, within CA264_20320 at 4682.935 kb on + strand, within CA264_20320 at 4682.936 kb on - strand, within CA264_20320 at 4682.940 kb on - strand, within CA264_20320 at 4682.973 kb on + strand, within CA264_20320 at 4682.973 kb on + strand, within CA264_20320 at 4682.999 kb on + strand, within CA264_20320 at 4683.000 kb on - strand, within CA264_20320 at 4683.044 kb on - strand, within CA264_20320 at 4683.044 kb on - strand, within CA264_20320 at 4683.134 kb on + strand at 4683.203 kb on + strand at 4683.204 kb on - strand at 4683.207 kb on + strand at 4683.208 kb on - strand at 4683.208 kb on - strand at 4683.211 kb on - strand at 4683.284 kb on - strand, within CA264_20325 at 4683.301 kb on + strand, within CA264_20325 at 4683.347 kb on + strand, within CA264_20325 at 4683.443 kb on - strand, within CA264_20325
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,680,677 + CA264_20310 0.46 -0.1 4,680,678 - CA264_20310 0.46 +1.8 4,680,763 - CA264_20310 0.58 +1.0 4,680,786 + CA264_20310 0.61 +0.8 4,680,854 - CA264_20310 0.70 +0.4 4,680,890 - CA264_20310 0.75 +1.2 4,680,946 - CA264_20310 0.83 +0.0 4,680,957 - CA264_20310 0.84 -0.3 4,680,959 + CA264_20310 0.85 -0.7 4,680,959 + CA264_20310 0.85 -0.4 4,680,960 - CA264_20310 0.85 +0.2 4,680,960 - CA264_20310 0.85 -0.5 4,681,140 - +0.0 4,681,151 + +2.5 4,681,205 + +0.4 4,681,243 + +1.1 4,681,244 - +0.4 4,681,244 - +0.7 4,681,245 + +0.7 4,681,245 + +0.5 4,681,246 - -0.7 4,681,288 - +0.0 4,681,288 - -0.2 4,681,288 - -0.5 4,681,292 - -0.4 4,681,294 - +0.1 4,681,327 - -0.2 4,681,377 + -1.2 4,681,377 + +0.5 4,681,381 + -2.7 4,681,382 - -0.8 4,681,396 + +1.1 4,681,397 - +1.1 4,681,397 - +0.4 4,681,429 + CA264_20315 0.11 +0.5 4,681,598 - CA264_20315 0.26 +0.0 4,681,635 + CA264_20315 0.29 +0.6 4,681,635 + CA264_20315 0.29 +0.2 4,681,636 - CA264_20315 0.29 -0.0 4,681,639 + CA264_20315 0.29 +0.1 4,681,640 - CA264_20315 0.29 -0.3 4,681,647 + CA264_20315 0.30 -1.3 4,681,785 + CA264_20315 0.42 -0.3 4,681,786 - CA264_20315 0.42 -0.7 4,681,835 - CA264_20315 0.46 +0.2 4,681,891 + CA264_20315 0.51 -0.1 4,681,913 + CA264_20315 0.53 -0.0 4,681,914 - CA264_20315 0.53 +0.1 4,682,123 - CA264_20315 0.72 +0.3 4,682,478 + -0.4 4,682,478 + +0.4 4,682,479 - -0.4 4,682,504 - +0.3 4,682,568 + +0.2 4,682,569 - +0.6 4,682,578 + +1.2 4,682,592 - -0.1 4,682,611 - -0.2 4,682,633 + -1.2 4,682,696 - CA264_20320 0.16 +0.3 4,682,773 + CA264_20320 0.31 +0.4 4,682,935 + CA264_20320 0.62 -0.9 4,682,936 - CA264_20320 0.62 -0.7 4,682,940 - CA264_20320 0.62 +0.2 4,682,973 + CA264_20320 0.69 -0.7 4,682,973 + CA264_20320 0.69 -0.1 4,682,999 + CA264_20320 0.74 -0.4 4,683,000 - CA264_20320 0.74 -0.3 4,683,044 - CA264_20320 0.82 -0.8 4,683,044 - CA264_20320 0.82 -0.4 4,683,134 + -0.5 4,683,203 + +0.4 4,683,204 - -2.0 4,683,207 + -0.1 4,683,208 - +0.5 4,683,208 - -0.9 4,683,211 - -0.2 4,683,284 - CA264_20325 0.11 -0.3 4,683,301 + CA264_20325 0.13 +0.4 4,683,347 + CA264_20325 0.19 -0.4 4,683,443 - CA264_20325 0.33 -0.2
Or see this region's nucleotide sequence