Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19505 and CA264_19510 are separated by 97 nucleotides CA264_19510 and CA264_19515 are separated by 6 nucleotides CA264_19515 and CA264_19520 are separated by 208 nucleotides
CA264_19505: CA264_19505 - Fe-S protein assembly chaperone HscA, at 4,505,986 to 4,507,851
_19505
CA264_19510: CA264_19510 - hypothetical protein, at 4,507,949 to 4,508,299
_19510
CA264_19515: CA264_19515 - malate dehydrogenase, at 4,508,306 to 4,509,373
_19515
CA264_19520: CA264_19520 - hypothetical protein, at 4,509,582 to 4,511,963
_19520
Position (kb)
4508
4509
4510 Strain fitness (log2 ratio)
-2
-1
0
1 at 4507.881 kb on + strand at 4507.891 kb on - strand at 4507.893 kb on - strand at 4507.911 kb on - strand at 4507.911 kb on - strand at 4507.913 kb on + strand at 4507.913 kb on + strand at 4507.914 kb on - strand at 4507.914 kb on - strand at 4507.914 kb on - strand at 4507.936 kb on + strand at 4507.941 kb on - strand at 4507.941 kb on - strand at 4507.941 kb on - strand at 4507.987 kb on + strand, within CA264_19510 at 4507.999 kb on - strand, within CA264_19510 at 4508.008 kb on + strand, within CA264_19510 at 4508.008 kb on + strand, within CA264_19510 at 4508.063 kb on + strand, within CA264_19510 at 4508.083 kb on - strand, within CA264_19510 at 4508.088 kb on + strand, within CA264_19510 at 4508.089 kb on - strand, within CA264_19510 at 4508.112 kb on + strand, within CA264_19510 at 4508.207 kb on + strand, within CA264_19510 at 4508.208 kb on - strand, within CA264_19510 at 4508.210 kb on + strand, within CA264_19510 at 4508.252 kb on + strand, within CA264_19510 at 4508.252 kb on + strand, within CA264_19510 at 4508.252 kb on + strand, within CA264_19510 at 4508.253 kb on - strand, within CA264_19510 at 4508.253 kb on - strand, within CA264_19510 at 4509.377 kb on - strand at 4509.377 kb on - strand at 4509.412 kb on + strand at 4509.412 kb on + strand at 4509.472 kb on + strand at 4509.494 kb on + strand at 4509.582 kb on - strand at 4509.594 kb on - strand at 4509.595 kb on + strand at 4509.595 kb on + strand at 4509.598 kb on + strand at 4509.599 kb on - strand at 4509.678 kb on + strand at 4509.679 kb on - strand at 4509.691 kb on - strand at 4509.764 kb on - strand at 4509.841 kb on + strand, within CA264_19520 at 4509.946 kb on - strand, within CA264_19520 at 4509.946 kb on - strand, within CA264_19520 at 4509.946 kb on - strand, within CA264_19520 at 4509.958 kb on + strand, within CA264_19520 at 4509.958 kb on + strand, within CA264_19520 at 4510.078 kb on - strand, within CA264_19520 at 4510.078 kb on - strand, within CA264_19520 at 4510.079 kb on + strand, within CA264_19520 at 4510.080 kb on - strand, within CA264_19520 at 4510.105 kb on + strand, within CA264_19520 at 4510.106 kb on - strand, within CA264_19520 at 4510.170 kb on - strand, within CA264_19520 at 4510.170 kb on - strand, within CA264_19520 at 4510.217 kb on - strand, within CA264_19520 at 4510.305 kb on + strand, within CA264_19520 at 4510.306 kb on - strand, within CA264_19520 at 4510.353 kb on + strand, within CA264_19520
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,507,881 + -0.1 4,507,891 - -0.9 4,507,893 - -1.3 4,507,911 - -1.5 4,507,911 - -0.2 4,507,913 + -2.4 4,507,913 + -0.1 4,507,914 - +0.1 4,507,914 - +0.7 4,507,914 - -1.7 4,507,936 + +0.7 4,507,941 - -0.0 4,507,941 - +0.0 4,507,941 - -0.5 4,507,987 + CA264_19510 0.11 -1.4 4,507,999 - CA264_19510 0.14 -0.2 4,508,008 + CA264_19510 0.17 -1.4 4,508,008 + CA264_19510 0.17 -1.9 4,508,063 + CA264_19510 0.32 -0.1 4,508,083 - CA264_19510 0.38 -0.3 4,508,088 + CA264_19510 0.40 -0.5 4,508,089 - CA264_19510 0.40 -0.6 4,508,112 + CA264_19510 0.46 -0.4 4,508,207 + CA264_19510 0.74 +1.1 4,508,208 - CA264_19510 0.74 -0.4 4,508,210 + CA264_19510 0.74 -1.4 4,508,252 + CA264_19510 0.86 +0.6 4,508,252 + CA264_19510 0.86 -0.3 4,508,252 + CA264_19510 0.86 -0.2 4,508,253 - CA264_19510 0.87 +0.5 4,508,253 - CA264_19510 0.87 -0.3 4,509,377 - +0.5 4,509,377 - -0.1 4,509,412 + +0.2 4,509,412 + -0.6 4,509,472 + +0.3 4,509,494 + +0.5 4,509,582 - -0.4 4,509,594 - -0.3 4,509,595 + +0.0 4,509,595 + -1.1 4,509,598 + +0.5 4,509,599 - -1.2 4,509,678 + -0.3 4,509,679 - -1.1 4,509,691 - -0.4 4,509,764 - +0.2 4,509,841 + CA264_19520 0.11 -0.9 4,509,946 - CA264_19520 0.15 -0.5 4,509,946 - CA264_19520 0.15 -0.5 4,509,946 - CA264_19520 0.15 -0.2 4,509,958 + CA264_19520 0.16 -0.5 4,509,958 + CA264_19520 0.16 -1.1 4,510,078 - CA264_19520 0.21 +0.1 4,510,078 - CA264_19520 0.21 -0.3 4,510,079 + CA264_19520 0.21 -0.8 4,510,080 - CA264_19520 0.21 -0.6 4,510,105 + CA264_19520 0.22 -0.1 4,510,106 - CA264_19520 0.22 +0.0 4,510,170 - CA264_19520 0.25 -0.5 4,510,170 - CA264_19520 0.25 +0.3 4,510,217 - CA264_19520 0.27 -0.6 4,510,305 + CA264_19520 0.30 +0.4 4,510,306 - CA264_19520 0.30 -0.2 4,510,353 + CA264_19520 0.32 +0.4
Or see this region's nucleotide sequence