Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18670 and CA264_18675 are separated by 122 nucleotides CA264_18675 and CA264_18680 are separated by 128 nucleotides CA264_18680 and CA264_18685 are separated by 78 nucleotides CA264_18685 and CA264_18690 are separated by 116 nucleotides
CA264_18670: CA264_18670 - cold-shock protein, at 4,338,729 to 4,338,923
_18670
CA264_18675: CA264_18675 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, at 4,339,046 to 4,339,543
_18675
CA264_18680: CA264_18680 - Fe-S assembly protein IscX, at 4,339,672 to 4,339,908
_18680
CA264_18685: CA264_18685 - ferredoxin, at 4,339,987 to 4,340,301
_18685
CA264_18690: CA264_18690 - hypothetical protein, at 4,340,418 to 4,341,197
_18690
Position (kb)
4339
4340 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4338.721 kb on - strand at 4338.721 kb on - strand at 4338.747 kb on + strand at 4338.774 kb on + strand, within CA264_18670 at 4338.774 kb on + strand, within CA264_18670 at 4338.774 kb on + strand, within CA264_18670 at 4338.774 kb on + strand, within CA264_18670 at 4338.774 kb on + strand, within CA264_18670 at 4338.775 kb on - strand, within CA264_18670 at 4338.887 kb on + strand, within CA264_18670 at 4338.928 kb on - strand at 4338.983 kb on + strand at 4338.983 kb on + strand at 4339.071 kb on - strand at 4339.224 kb on + strand, within CA264_18675 at 4339.224 kb on + strand, within CA264_18675 at 4339.224 kb on + strand, within CA264_18675 at 4339.225 kb on - strand, within CA264_18675 at 4339.225 kb on - strand, within CA264_18675 at 4339.225 kb on - strand, within CA264_18675 at 4339.225 kb on - strand, within CA264_18675 at 4339.230 kb on - strand, within CA264_18675 at 4339.244 kb on + strand, within CA264_18675 at 4339.258 kb on - strand, within CA264_18675 at 4339.258 kb on - strand, within CA264_18675 at 4339.264 kb on - strand, within CA264_18675 at 4339.313 kb on + strand, within CA264_18675 at 4339.481 kb on + strand, within CA264_18675 at 4339.569 kb on + strand at 4339.574 kb on + strand at 4339.575 kb on - strand at 4339.634 kb on - strand at 4339.908 kb on + strand at 4339.930 kb on - strand at 4339.943 kb on + strand at 4339.981 kb on - strand at 4340.334 kb on - strand at 4340.334 kb on - strand at 4340.347 kb on - strand at 4340.443 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,338,721 - -2.2 4,338,721 - -0.6 4,338,747 + -3.0 4,338,774 + CA264_18670 0.23 -2.6 4,338,774 + CA264_18670 0.23 -2.2 4,338,774 + CA264_18670 0.23 -2.5 4,338,774 + CA264_18670 0.23 -3.7 4,338,774 + CA264_18670 0.23 -0.9 4,338,775 - CA264_18670 0.24 -2.4 4,338,887 + CA264_18670 0.81 -3.6 4,338,928 - -3.8 4,338,983 + -1.3 4,338,983 + -1.6 4,339,071 - -1.0 4,339,224 + CA264_18675 0.36 -2.3 4,339,224 + CA264_18675 0.36 +0.9 4,339,224 + CA264_18675 0.36 -0.9 4,339,225 - CA264_18675 0.36 -1.8 4,339,225 - CA264_18675 0.36 +1.5 4,339,225 - CA264_18675 0.36 -0.2 4,339,225 - CA264_18675 0.36 -0.4 4,339,230 - CA264_18675 0.37 +0.1 4,339,244 + CA264_18675 0.40 -0.9 4,339,258 - CA264_18675 0.43 -0.1 4,339,258 - CA264_18675 0.43 +0.9 4,339,264 - CA264_18675 0.44 -0.8 4,339,313 + CA264_18675 0.54 -1.7 4,339,481 + CA264_18675 0.87 -2.9 4,339,569 + -2.6 4,339,574 + -2.2 4,339,575 - +0.3 4,339,634 - -0.3 4,339,908 + -3.8 4,339,930 - -0.7 4,339,943 + -1.1 4,339,981 - -0.7 4,340,334 - -0.3 4,340,334 - -0.8 4,340,347 - -0.1 4,340,443 - -0.8
Or see this region's nucleotide sequence