Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18540 and CA264_18545 are separated by 203 nucleotides CA264_18545 and CA264_18550 are separated by 321 nucleotides CA264_18550 and CA264_18555 are separated by 81 nucleotides CA264_18555 and CA264_18560 are separated by 202 nucleotides
CA264_18540: CA264_18540 - RNA methyltransferase, at 4,313,909 to 4,314,448
_18540
CA264_18545: CA264_18545 - DNA mismatch repair protein MutS, at 4,314,652 to 4,317,285
_18545
CA264_18550: CA264_18550 - tRNA-Gly, at 4,317,607 to 4,317,679
_18550
CA264_18555: CA264_18555 - tRNA-Leu, at 4,317,761 to 4,317,844
_18555
CA264_18560: CA264_18560 - hypothetical protein, at 4,318,047 to 4,319,141
_18560
Position (kb)
4314
4315
4316
4317
4318 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4313.720 kb on + strand at 4313.737 kb on - strand at 4313.737 kb on - strand at 4313.737 kb on - strand at 4313.741 kb on - strand at 4313.741 kb on - strand at 4313.741 kb on - strand at 4313.741 kb on - strand at 4313.742 kb on + strand at 4313.743 kb on - strand at 4313.743 kb on - strand at 4313.769 kb on - strand at 4313.974 kb on + strand, within CA264_18540 at 4314.082 kb on - strand, within CA264_18540 at 4314.121 kb on + strand, within CA264_18540 at 4314.122 kb on - strand, within CA264_18540 at 4314.122 kb on - strand, within CA264_18540 at 4314.251 kb on - strand, within CA264_18540 at 4314.432 kb on - strand at 4314.474 kb on - strand at 4314.474 kb on - strand at 4314.550 kb on - strand at 4314.568 kb on + strand at 4314.570 kb on + strand at 4314.571 kb on - strand at 4314.602 kb on + strand at 4314.603 kb on - strand at 4314.639 kb on + strand at 4314.639 kb on + strand at 4314.640 kb on - strand at 4314.640 kb on - strand at 4314.643 kb on - strand at 4314.643 kb on - strand at 4314.648 kb on + strand at 4314.648 kb on + strand at 4314.648 kb on + strand at 4314.648 kb on + strand at 4314.648 kb on + strand at 4314.648 kb on + strand at 4314.648 kb on + strand at 4314.648 kb on + strand at 4314.649 kb on - strand at 4314.649 kb on - strand at 4314.651 kb on + strand at 4314.652 kb on - strand at 4314.652 kb on - strand at 4314.697 kb on + strand at 4314.810 kb on - strand at 4314.810 kb on - strand at 4314.812 kb on + strand at 4314.883 kb on + strand at 4314.884 kb on - strand at 4314.884 kb on - strand at 4314.977 kb on + strand, within CA264_18545 at 4315.042 kb on + strand, within CA264_18545 at 4315.043 kb on - strand, within CA264_18545 at 4315.240 kb on + strand, within CA264_18545 at 4315.241 kb on - strand, within CA264_18545 at 4315.241 kb on - strand, within CA264_18545 at 4315.263 kb on + strand, within CA264_18545 at 4315.369 kb on - strand, within CA264_18545 at 4315.369 kb on - strand, within CA264_18545 at 4315.443 kb on + strand, within CA264_18545 at 4315.443 kb on + strand, within CA264_18545 at 4315.443 kb on + strand, within CA264_18545 at 4315.444 kb on - strand, within CA264_18545 at 4315.447 kb on + strand, within CA264_18545 at 4315.447 kb on + strand, within CA264_18545 at 4315.448 kb on - strand, within CA264_18545 at 4315.674 kb on - strand, within CA264_18545 at 4316.007 kb on - strand, within CA264_18545 at 4316.088 kb on - strand, within CA264_18545 at 4316.158 kb on + strand, within CA264_18545 at 4316.158 kb on + strand, within CA264_18545 at 4316.159 kb on - strand, within CA264_18545 at 4316.183 kb on - strand, within CA264_18545 at 4316.218 kb on + strand, within CA264_18545 at 4316.219 kb on - strand, within CA264_18545 at 4316.241 kb on + strand, within CA264_18545 at 4316.257 kb on + strand, within CA264_18545 at 4316.258 kb on - strand, within CA264_18545 at 4316.270 kb on - strand, within CA264_18545 at 4316.270 kb on - strand, within CA264_18545 at 4316.270 kb on - strand, within CA264_18545 at 4316.418 kb on - strand, within CA264_18545 at 4316.420 kb on + strand, within CA264_18545 at 4316.420 kb on + strand, within CA264_18545 at 4316.421 kb on - strand, within CA264_18545 at 4316.449 kb on + strand, within CA264_18545 at 4316.449 kb on + strand, within CA264_18545 at 4316.450 kb on - strand, within CA264_18545 at 4316.464 kb on - strand, within CA264_18545 at 4316.492 kb on + strand, within CA264_18545 at 4316.524 kb on - strand, within CA264_18545 at 4316.620 kb on - strand, within CA264_18545 at 4316.636 kb on + strand, within CA264_18545 at 4316.670 kb on + strand, within CA264_18545 at 4316.671 kb on - strand, within CA264_18545 at 4316.671 kb on - strand, within CA264_18545 at 4316.671 kb on - strand, within CA264_18545 at 4316.677 kb on - strand, within CA264_18545 at 4316.718 kb on - strand, within CA264_18545 at 4316.770 kb on + strand, within CA264_18545 at 4316.827 kb on + strand, within CA264_18545 at 4316.828 kb on - strand, within CA264_18545 at 4316.828 kb on - strand, within CA264_18545 at 4316.857 kb on + strand, within CA264_18545 at 4316.858 kb on - strand, within CA264_18545 at 4316.905 kb on + strand, within CA264_18545 at 4316.905 kb on + strand, within CA264_18545 at 4316.905 kb on + strand, within CA264_18545 at 4316.906 kb on - strand, within CA264_18545 at 4316.906 kb on - strand, within CA264_18545 at 4316.991 kb on - strand, within CA264_18545 at 4316.991 kb on - strand, within CA264_18545 at 4316.991 kb on - strand, within CA264_18545 at 4316.991 kb on - strand, within CA264_18545 at 4317.415 kb on - strand at 4317.415 kb on - strand at 4317.872 kb on + strand at 4317.984 kb on - strand at 4318.117 kb on + strand at 4318.118 kb on - strand at 4318.123 kb on + strand at 4318.124 kb on - strand at 4318.126 kb on - strand at 4318.130 kb on - strand at 4318.137 kb on + strand at 4318.138 kb on - strand at 4318.141 kb on - strand at 4318.168 kb on + strand, within CA264_18560 at 4318.217 kb on + strand, within CA264_18560 at 4318.217 kb on + strand, within CA264_18560 at 4318.218 kb on - strand, within CA264_18560 at 4318.218 kb on - strand, within CA264_18560
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,313,720 + -0.3 4,313,737 - -1.0 4,313,737 - +0.5 4,313,737 - -0.1 4,313,741 - -0.4 4,313,741 - -0.8 4,313,741 - +0.1 4,313,741 - -0.7 4,313,742 + -1.3 4,313,743 - +1.0 4,313,743 - -0.4 4,313,769 - +1.5 4,313,974 + CA264_18540 0.12 -1.5 4,314,082 - CA264_18540 0.32 -0.9 4,314,121 + CA264_18540 0.39 -1.3 4,314,122 - CA264_18540 0.39 -0.1 4,314,122 - CA264_18540 0.39 -0.2 4,314,251 - CA264_18540 0.63 -1.7 4,314,432 - -2.4 4,314,474 - +0.5 4,314,474 - -1.0 4,314,550 - -0.4 4,314,568 + -0.0 4,314,570 + -3.4 4,314,571 - -0.8 4,314,602 + -1.1 4,314,603 - -0.0 4,314,639 + -1.6 4,314,639 + -1.3 4,314,640 - -1.0 4,314,640 - -2.7 4,314,643 - +1.8 4,314,643 - -1.6 4,314,648 + -0.3 4,314,648 + +0.0 4,314,648 + +0.0 4,314,648 + -0.1 4,314,648 + -0.2 4,314,648 + +0.8 4,314,648 + -0.7 4,314,648 + +1.0 4,314,649 - +0.1 4,314,649 - -0.3 4,314,651 + +0.1 4,314,652 - -0.8 4,314,652 - -0.3 4,314,697 + +0.2 4,314,810 - +1.3 4,314,810 - +0.1 4,314,812 + -2.0 4,314,883 + -0.8 4,314,884 - +0.6 4,314,884 - -0.5 4,314,977 + CA264_18545 0.12 -0.9 4,315,042 + CA264_18545 0.15 +0.2 4,315,043 - CA264_18545 0.15 +1.9 4,315,240 + CA264_18545 0.22 -0.5 4,315,241 - CA264_18545 0.22 +0.2 4,315,241 - CA264_18545 0.22 -0.5 4,315,263 + CA264_18545 0.23 -0.1 4,315,369 - CA264_18545 0.27 +0.6 4,315,369 - CA264_18545 0.27 +0.0 4,315,443 + CA264_18545 0.30 +0.7 4,315,443 + CA264_18545 0.30 -0.1 4,315,443 + CA264_18545 0.30 +0.3 4,315,444 - CA264_18545 0.30 -0.0 4,315,447 + CA264_18545 0.30 -0.6 4,315,447 + CA264_18545 0.30 +0.4 4,315,448 - CA264_18545 0.30 -1.2 4,315,674 - CA264_18545 0.39 -0.1 4,316,007 - CA264_18545 0.51 +1.1 4,316,088 - CA264_18545 0.55 +1.3 4,316,158 + CA264_18545 0.57 +0.3 4,316,158 + CA264_18545 0.57 +1.3 4,316,159 - CA264_18545 0.57 -0.2 4,316,183 - CA264_18545 0.58 -0.2 4,316,218 + CA264_18545 0.59 +0.1 4,316,219 - CA264_18545 0.59 +0.1 4,316,241 + CA264_18545 0.60 -0.3 4,316,257 + CA264_18545 0.61 +0.1 4,316,258 - CA264_18545 0.61 +0.8 4,316,270 - CA264_18545 0.61 -0.5 4,316,270 - CA264_18545 0.61 -0.4 4,316,270 - CA264_18545 0.61 -1.2 4,316,418 - CA264_18545 0.67 -0.2 4,316,420 + CA264_18545 0.67 +0.8 4,316,420 + CA264_18545 0.67 +1.0 4,316,421 - CA264_18545 0.67 -0.1 4,316,449 + CA264_18545 0.68 -0.2 4,316,449 + CA264_18545 0.68 -0.1 4,316,450 - CA264_18545 0.68 +0.3 4,316,464 - CA264_18545 0.69 -0.3 4,316,492 + CA264_18545 0.70 -0.3 4,316,524 - CA264_18545 0.71 +1.1 4,316,620 - CA264_18545 0.75 +1.2 4,316,636 + CA264_18545 0.75 -0.7 4,316,670 + CA264_18545 0.77 +0.2 4,316,671 - CA264_18545 0.77 +0.3 4,316,671 - CA264_18545 0.77 -0.1 4,316,671 - CA264_18545 0.77 +0.5 4,316,677 - CA264_18545 0.77 +1.2 4,316,718 - CA264_18545 0.78 -0.9 4,316,770 + CA264_18545 0.80 -1.2 4,316,827 + CA264_18545 0.83 -3.3 4,316,828 - CA264_18545 0.83 -0.7 4,316,828 - CA264_18545 0.83 -0.1 4,316,857 + CA264_18545 0.84 -0.5 4,316,858 - CA264_18545 0.84 -0.6 4,316,905 + CA264_18545 0.86 +0.2 4,316,905 + CA264_18545 0.86 -0.7 4,316,905 + CA264_18545 0.86 -1.2 4,316,906 - CA264_18545 0.86 -0.4 4,316,906 - CA264_18545 0.86 +0.7 4,316,991 - CA264_18545 0.89 +0.1 4,316,991 - CA264_18545 0.89 +0.0 4,316,991 - CA264_18545 0.89 -2.0 4,316,991 - CA264_18545 0.89 -0.2 4,317,415 - +0.6 4,317,415 - +0.1 4,317,872 + -0.4 4,317,984 - +0.3 4,318,117 + +0.5 4,318,118 - +0.8 4,318,123 + +0.0 4,318,124 - -0.3 4,318,126 - -0.3 4,318,130 - +0.4 4,318,137 + +0.2 4,318,138 - -0.3 4,318,141 - +0.4 4,318,168 + CA264_18560 0.11 -0.2 4,318,217 + CA264_18560 0.16 -0.9 4,318,217 + CA264_18560 0.16 -1.7 4,318,218 - CA264_18560 0.16 +0.7 4,318,218 - CA264_18560 0.16 +0.3
Or see this region's nucleotide sequence